=============================================================================== About this build: this rebuild has been done as part of reproduce.debian.net where we aim to reproduce Debian binary packages distributed via ftp.debian.org, by rebuilding using the exact same packages as the original build on the buildds, as described in the relevant .buildinfo file from buildinfos.debian.net. For more information please go to https://reproduce.debian.net or join #debian-reproducible on irc.debian.org =============================================================================== Preparing download of sources for /srv/rebuilderd/tmp/rebuilderdLDozCh/inputs/libsbml_5.20.5+dfsg-3_riscv64.buildinfo Source: libsbml Version: 5.20.5+dfsg-3 rebuilderd-worker node: riscv64-07 +------------------------------------------------------------------------------+ | Downloading sources Sun, 22 Mar 2026 05:55:18 +0000 | +------------------------------------------------------------------------------+ Get:1 https://deb.debian.org/debian trixie InRelease [140 kB] Get:2 https://deb.debian.org/debian-security trixie-security InRelease [43.4 kB] Get:3 https://deb.debian.org/debian trixie-updates InRelease [47.3 kB] Get:4 https://deb.debian.org/debian trixie-proposed-updates InRelease [57.6 kB] Get:5 https://deb.debian.org/debian trixie-backports InRelease [54.0 kB] Get:6 https://deb.debian.org/debian forky InRelease [137 kB] Get:7 https://deb.debian.org/debian sid InRelease [187 kB] Get:8 https://deb.debian.org/debian experimental InRelease [91.7 kB] Get:9 https://deb.debian.org/debian trixie/main Sources [10.5 MB] Get:10 https://deb.debian.org/debian trixie/non-free-firmware Sources [6552 B] Get:11 https://deb.debian.org/debian-security trixie-security/non-free-firmware Sources [696 B] Get:12 https://deb.debian.org/debian-security trixie-security/main Sources [123 kB] Get:13 https://deb.debian.org/debian trixie-updates/main Sources [2788 B] Get:14 https://deb.debian.org/debian trixie-proposed-updates/main Sources [18.9 kB] Get:15 https://deb.debian.org/debian trixie-backports/main Sources [170 kB] Get:16 https://deb.debian.org/debian trixie-backports/non-free-firmware Sources [2984 B] Get:17 https://deb.debian.org/debian forky/main Sources [10.8 MB] Get:18 https://deb.debian.org/debian forky/non-free-firmware Sources [8304 B] Get:19 https://deb.debian.org/debian sid/main Sources [11.5 MB] Get:20 https://deb.debian.org/debian sid/non-free-firmware Sources [10.5 kB] Get:21 https://deb.debian.org/debian experimental/main Sources [494 kB] Get:22 https://deb.debian.org/debian experimental/non-free-firmware Sources [2568 B] Fetched 34.4 MB in 22s (1536 kB/s) Reading package lists... 'https://deb.debian.org/debian/pool/main/libs/libsbml/libsbml_5.20.5%2bdfsg-3.dsc' libsbml_5.20.5+dfsg-3.dsc 2951 SHA256:30adb2bcc95f6d83aaefb9a893a83b1bc036456e8dbefd900b5a9823c57cf2f2 'https://deb.debian.org/debian/pool/main/libs/libsbml/libsbml_5.20.5%2bdfsg.orig.tar.xz' libsbml_5.20.5+dfsg.orig.tar.xz 15814028 SHA256:230fcddf7d1212d0795bec5254b43839cc828c5786f12c52e7d63168a7574e32 'https://deb.debian.org/debian/pool/main/libs/libsbml/libsbml_5.20.5%2bdfsg-3.debian.tar.xz' libsbml_5.20.5+dfsg-3.debian.tar.xz 24968 SHA256:acb05ff464d19280a246d245416ff71df813746549534a0d2e2e20b10faf5b97 230fcddf7d1212d0795bec5254b43839cc828c5786f12c52e7d63168a7574e32 libsbml_5.20.5+dfsg.orig.tar.xz acb05ff464d19280a246d245416ff71df813746549534a0d2e2e20b10faf5b97 libsbml_5.20.5+dfsg-3.debian.tar.xz 30adb2bcc95f6d83aaefb9a893a83b1bc036456e8dbefd900b5a9823c57cf2f2 libsbml_5.20.5+dfsg-3.dsc +------------------------------------------------------------------------------+ | Calling debrebuild Sun, 22 Mar 2026 05:55:47 +0000 | +------------------------------------------------------------------------------+ + nice /usr/bin/debrebuildRebuilding libsbml=5.20.5+dfsg-3 in /srv/rebuilderd/tmp/rebuilderdLDozCh/inputs now. --buildresult=/srv/rebuilderd/tmp/rebuilderdLDozCh/out --builder=sbuild+unshare --cache=/srv/rebuilderd/cache -- /srv/rebuilderd/tmp/rebuilderdLDozCh/inputs/libsbml_5.20.5+dfsg-3_riscv64.buildinfo /srv/rebuilderd/tmp/rebuilderdLDozCh/inputs/libsbml_5.20.5+dfsg-3_riscv64.buildinfo contains a GPG signature which has NOT been validated Using defined Build-Path: /build/reproducible-path/libsbml-5.20.5+dfsg I: verifying dsc... successful! Get:1 http://deb.debian.org/debian unstable InRelease [187 kB] Get:2 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable InRelease [187 kB] Get:3 http://deb.debian.org/debian unstable/main riscv64 Packages [9970 kB] Get:4 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 Packages [9793 kB] Fetched 20.1 MB in 13s (1543 kB/s) Reading package lists... W: http://snapshot.debian.org/archive/debian/20260219T084350Z/dists/unstable/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted Get:1 http://deb.debian.org/debian unstable/main riscv64 libc-dev-bin riscv64 2.42-13 [60.4 kB] Fetched 60.4 kB in 0s (1053 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmc0ovzvf/libc-dev-bin_2.42-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxml-sax-perl all 1.02+dfsg-4 [53.4 kB] Fetched 53.4 kB in 0s (878 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpavdmm6es/libxml-sax-perl_1.02+dfsg-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 hostname riscv64 3.25 [10.7 kB] Fetched 10.7 kB in 0s (195 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr7lnjdyo/hostname_3.25_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgl-dev riscv64 1.7.0-3 [101 kB] Fetched 101 kB in 0s (1679 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzh71ykrs/libgl-dev_1.7.0-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libegl-mesa0 riscv64 26.0.0-1 [128 kB] Fetched 128 kB in 0s (2086 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn3ry3zsj/libegl-mesa0_26.0.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libavahi-common3 riscv64 0.8-18 [44.4 kB] Fetched 44.4 kB in 0s (779 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4aappiv3/libavahi-common3_0.8-18_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libconfig-model-dpkg-perl all 3.017 [192 kB] Fetched 192 kB in 0s (2910 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0b0_0xng/libconfig-model-dpkg-perl_3.017_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 t1utils riscv64 1.41-4+b1 [60.0 kB] Fetched 60.0 kB in 0s (732 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpemoh8i91/t1utils_1.41-4+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcdt6 riscv64 14.1.2-1 [17.9 kB] Fetched 17.9 kB in 0s (323 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq9ghdum4/libcdt6_14.1.2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 gcc-riscv64-linux-gnu riscv64 4:15.2.0-5 [1432 B] Fetched 1432 B in 0s (26.5 kB/s) dpkg-name: info: moved 'gcc-riscv64-linux-gnu_4%3a15.2.0-5_riscv64.deb' to '/srv/rebuilderd/tmp/tmpukqlvszk/gcc-riscv64-linux-gnu_15.2.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 g++-riscv64-linux-gnu riscv64 4:15.2.0-5 [1196 B] Fetched 1196 B in 0s (22.0 kB/s) dpkg-name: info: moved 'g++-riscv64-linux-gnu_4%3a15.2.0-5_riscv64.deb' to '/srv/rebuilderd/tmp/tmp6oo4tifs/g++-riscv64-linux-gnu_15.2.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libicu76 riscv64 76.1-4+b1 [9709 kB] Fetched 9709 kB in 1s (16.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl2ygqmel/libicu76_76.1-4+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libqt6dbus6 riscv64 6.9.2+dfsg-4 [271 kB] Fetched 271 kB in 0s (3801 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm4npaqe5/libqt6dbus6_6.9.2+dfsg-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 zip riscv64 3.0-15 [240 kB] Fetched 240 kB in 0s (3520 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbslu_b2k/zip_3.0-15_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-dev riscv64 3.13.9-3 [26.0 kB] Fetched 26.0 kB in 0s (468 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr43m3sah/python3-dev_3.13.9-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libx11-dev riscv64 2:1.8.12-1+b1 [1504 kB] Fetched 1504 kB in 0s (11.0 MB/s) dpkg-name: info: moved 'libx11-dev_2%3a1.8.12-1+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp3mjm7507/libx11-dev_1.8.12-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Fetched 15.5 kB in 0s (271 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pyd8479/liblist-utilsby-perl_0.12-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgvplugin-pango8 riscv64 14.1.2-1 [29.7 kB] Fetched 29.7 kB in 0s (536 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0q8ov_it/libgvplugin-pango8_14.1.2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libyaml-tiny-perl all 1.76-1 [29.8 kB] Fetched 29.8 kB in 0s (532 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpew76jfip/libyaml-tiny-perl_1.76-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcpanel-json-xs-perl riscv64 4.40-1 [134 kB] Fetched 134 kB in 0s (2173 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl_xuwnvq/libcpanel-json-xs-perl_4.40-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtcl8.6 riscv64 8.6.17+dfsg-1+b1 [1073 kB] Fetched 1073 kB in 0s (9443 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_42famml/libtcl8.6_8.6.17+dfsg-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 debianutils riscv64 5.23.2 [91.7 kB] Fetched 91.7 kB in 0s (1507 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2tbp_9xx/debianutils_5.23.2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxinerama1 riscv64 2:1.1.4-3+b5 [16.0 kB] Fetched 16.0 kB in 0s (284 kB/s) dpkg-name: info: moved 'libxinerama1_2%3a1.1.4-3+b5_riscv64.deb' to '/srv/rebuilderd/tmp/tmpscr_ja0c/libxinerama1_1.1.4-3+b5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3-stdlib riscv64 3.13.9-3 [10.6 kB] Fetched 10.6 kB in 0s (192 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppw5hh4gw/libpython3-stdlib_3.13.9-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libkrb5-3 riscv64 1.22.1-2 [346 kB] Fetched 346 kB in 0s (4641 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxbea_p60/libkrb5-3_1.22.1-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfeature-compat-try-perl all 0.05-1 [10.4 kB] Fetched 10.4 kB in 0s (183 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyaj8tbtn/libfeature-compat-try-perl_0.05-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libssh2-1t64 riscv64 1.11.1-1+b1 [249 kB] Fetched 249 kB in 0s (3640 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptpcbzfiv/libssh2-1t64_1.11.1-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsoftware-license-perl all 0.104007-1 [121 kB] Fetched 121 kB in 0s (1952 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2j2zmv9h/libsoftware-license-perl_0.104007-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxmlb2 riscv64 0.3.24-2 [65.4 kB] Fetched 65.4 kB in 0s (1108 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxmi3n229/libxmlb2_0.3.24-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libglx-dev riscv64 1.7.0-3 [15.8 kB] Fetched 15.8 kB in 0s (279 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe19s462b/libglx-dev_1.7.0-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liberror-perl all 0.17030-1 [26.9 kB] Fetched 26.9 kB in 0s (476 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcbjoxuf5/liberror-perl_0.17030-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libcurl3t64-gnutls riscv64 8.18.0-2 [409 kB] Fetched 409 kB in 0s (5044 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2jlpe8kl/libcurl3t64-gnutls_8.18.0-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 base-files riscv64 14 [72.9 kB] Fetched 72.9 kB in 0s (1251 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp162hq0yr/base-files_14_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblist-moreutils-perl all 0.430-2 [46.9 kB] Fetched 46.9 kB in 0s (815 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmlr5s_zn/liblist-moreutils-perl_0.430-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxpm4 riscv64 1:3.5.17-1+b4 [55.9 kB] Fetched 55.9 kB in 0s (970 kB/s) dpkg-name: info: moved 'libxpm4_1%3a3.5.17-1+b4_riscv64.deb' to '/srv/rebuilderd/tmp/tmpvwoeo088/libxpm4_3.5.17-1+b4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 bsdextrautils riscv64 2.41.3-3 [102 kB] Fetched 102 kB in 0s (1682 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplqoi41gv/bsdextrautils_2.41.3-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 file riscv64 1:5.46-5+b1 [43.5 kB] Fetched 43.5 kB in 0s (748 kB/s) dpkg-name: info: moved 'file_1%3a5.46-5+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpknctlr1a/file_5.46-5+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libnet-http-perl all 6.24-1 [23.2 kB] Fetched 23.2 kB in 0s (408 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_45t0h7r/libnet-http-perl_6.24-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libctf0 riscv64 2.46-1 [96.2 kB] Fetched 96.2 kB in 0s (1515 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo5o84rrz/libctf0_2.46-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libimagequant0 riscv64 4.4.1-1+b1 [259 kB] Fetched 259 kB in 0s (3747 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvo7b6fw_/libimagequant0_4.4.1-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 librole-tiny-perl all 2.002004-1 [21.4 kB] Fetched 21.4 kB in 0s (382 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6xj_gt6f/librole-tiny-perl_2.002004-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 autotools-dev all 20240727.1 [60.2 kB] Fetched 60.2 kB in 0s (1032 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9zraiisa/autotools-dev_20240727.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libbrotli1 riscv64 1.2.0-3 [357 kB] Fetched 357 kB in 0s (4847 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpatpjm76a/libbrotli1_1.2.0-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libstemmer0d riscv64 3.0.1-1+b1 [116 kB] Fetched 116 kB in 0s (1910 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbb8lbq_4/libstemmer0d_3.0.1-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 coreutils riscv64 9.7-3 [3036 kB] Fetched 3036 kB in 0s (13.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf0bslthc/coreutils_9.7-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 autopoint all 0.23.2-1 [772 kB] Fetched 772 kB in 0s (7764 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppfzinhh7/autopoint_0.23.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libencode-locale-perl all 1.05-3 [12.9 kB] Fetched 12.9 kB in 0s (225 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsl6_rdkx/libencode-locale-perl_1.05-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Fetched 12.6 kB in 0s (225 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_932zu8x/libmodule-implementation-perl_0.09-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-sync1 riscv64 1.17.0-2+b2 [109 kB] Fetched 109 kB in 0s (1798 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzdcrif4m/libxcb-sync1_1.17.0-2+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-xkb1 riscv64 1.17.0-2+b2 [130 kB] Fetched 130 kB in 0s (2089 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp98fh6mux/libxcb-xkb1_1.17.0-2+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libkadm5clnt-mit12 riscv64 1.22.1-2 [42.2 kB] Fetched 42.2 kB in 0s (739 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpshs7spuf/libkadm5clnt-mit12_1.22.1-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdb5.3t64 riscv64 5.3.28+dfsg2-11 [719 kB] Fetched 719 kB in 0s (7726 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplo3us5e7/libdb5.3t64_5.3.28+dfsg2-11_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 ncurses-bin riscv64 6.6+20251231-1 [443 kB] Fetched 443 kB in 0s (5613 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8jmckdgq/ncurses-bin_6.6+20251231-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 mawk riscv64 1.3.4.20260129-1 [143 kB] Fetched 143 kB in 0s (2274 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdqxbq895/mawk_1.3.4.20260129-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libjson-maybexs-perl all 1.004008-1 [12.9 kB] Fetched 12.9 kB in 0s (229 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa8niiynv/libjson-maybexs-perl_1.004008-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-image0 riscv64 0.4.0-2+b3 [22.1 kB] Fetched 22.1 kB in 0s (396 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7bu3spqc/libxcb-image0_0.4.0-2+b3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libicu-dev riscv64 76.1-4+b1 [16.4 MB] Fetched 16.4 MB in 1s (17.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi7_ybl10/libicu-dev_76.1-4+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libcurl4-openssl-dev riscv64 8.18.0-2 [1329 kB] Fetched 1329 kB in 0s (10.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt9mu2uwk/libcurl4-openssl-dev_8.18.0-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblog-any-adapter-screen-perl all 0.141-2 [14.0 kB] Fetched 14.0 kB in 0s (243 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn6vriz4o/liblog-any-adapter-screen-perl_0.141-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libnet-domain-tld-perl all 1.75-4 [31.5 kB] Fetched 31.5 kB in 0s (559 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3ac4fuw9/libnet-domain-tld-perl_1.75-4_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libngtcp2-crypto-gnutls8 riscv64 1.16.0-1 [25.3 kB] Fetched 25.3 kB in 0s (458 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp73u7inbh/libngtcp2-crypto-gnutls8_1.16.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhttp-message-perl all 7.01-1 [80.0 kB] Fetched 80.0 kB in 0s (1345 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0we3swy8/libhttp-message-perl_7.01-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcursor1 riscv64 1:1.2.3-1+b1 [40.3 kB] Fetched 40.3 kB in 0s (701 kB/s) dpkg-name: info: moved 'libxcursor1_1%3a1.2.3-1+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp63h2ox9e/libxcursor1_1.2.3-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Fetched 20.2 kB in 0s (353 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_9qrwvod/liblwp-mediatypes-perl_6.04-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpam-modules-bin riscv64 1.7.0-5+b1 [49.6 kB] Fetched 49.6 kB in 0s (855 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqfd0iupq/libpam-modules-bin_1.7.0-5+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libisl23 riscv64 0.27-1+b1 [664 kB] Fetched 664 kB in 0s (7376 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc4rega5k/libisl23_0.27-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 gcc-15-base riscv64 15.2.0-13 [54.8 kB] Fetched 54.8 kB in 0s (938 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkc_mdtqr/gcc-15-base_15.2.0-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 perl riscv64 5.40.1-7 [267 kB] Fetched 267 kB in 0s (3859 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp38rr2mej/perl_5.40.1-7_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libglx-mesa0 riscv64 26.0.0-1 [134 kB] Fetched 134 kB in 0s (2121 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu_ubr5p9/libglx-mesa0_26.0.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxml-libxml-perl riscv64 2.0207+dfsg+really+2.0134-7 [315 kB] Fetched 315 kB in 0s (4407 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc_1krjrm/libxml-libxml-perl_2.0207+dfsg+really+2.0134-7_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 java-common all 0.76 [6776 B] Fetched 6776 B in 0s (122 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp53kbbr75/java-common_0.76_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libqt6openglwidgets6 riscv64 6.9.2+dfsg-4 [50.6 kB] Fetched 50.6 kB in 0s (876 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi544w6jt/libqt6openglwidgets6_6.9.2+dfsg-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpsl5t64 riscv64 0.21.2-1.1+b2 [59.8 kB] Fetched 59.8 kB in 0s (1046 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbmefu6mh/libpsl5t64_0.21.2-1.1+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpod-constants-perl all 0.19-2 [17.3 kB] Fetched 17.3 kB in 0s (319 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptpr34eso/libpod-constants-perl_0.19-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libarray-intspan-perl all 2.004-2 [25.7 kB] Fetched 25.7 kB in 0s (458 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm3a40dl2/libarray-intspan-perl_2.004-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libvariable-magic-perl riscv64 0.64-1+b1 [44.6 kB] Fetched 44.6 kB in 0s (748 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd2uqktp5/libvariable-magic-perl_0.64-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgl1 riscv64 1.7.0-3 [113 kB] Fetched 113 kB in 0s (1854 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6_mboyge/libgl1_1.7.0-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libalgorithm-c3-perl all 0.11-2 [10.8 kB] Fetched 10.8 kB in 0s (196 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9ibjjb6t/libalgorithm-c3-perl_0.11-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfontconfig1 riscv64 2.17.1-5 [137 kB] Fetched 137 kB in 0s (2259 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpatihfiac/libfontconfig1_2.17.1-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 openssl riscv64 3.5.5-1 [1478 kB] Fetched 1478 kB in 0s (11.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqaocaul0/openssl_3.5.5-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 automake all 1:1.18.1-3 [878 kB] Fetched 878 kB in 0s (8499 kB/s) dpkg-name: info: moved 'automake_1%3a1.18.1-3_all.deb' to '/srv/rebuilderd/tmp/tmpjzfuxm8y/automake_1.18.1-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxs-parse-keyword-perl riscv64 0.49-1 [65.7 kB] Fetched 65.7 kB in 0s (1096 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6982bw2y/libxs-parse-keyword-perl_0.49-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdevel-callchecker-perl riscv64 0.009-3 [15.3 kB] Fetched 15.3 kB in 0s (279 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9zjm25un/libdevel-callchecker-perl_0.009-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcholmod5 riscv64 1:7.12.2+dfsg-1 [654 kB] Fetched 654 kB in 0s (7247 kB/s) dpkg-name: info: moved 'libcholmod5_1%3a7.12.2+dfsg-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpygricww5/libcholmod5_7.12.2+dfsg-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtasn1-6 riscv64 4.21.0-2 [50.7 kB] Fetched 50.7 kB in 0s (883 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo9m7eba8/libtasn1-6_4.21.0-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcxsparse4 riscv64 1:7.12.2+dfsg-1 [90.4 kB] Fetched 90.4 kB in 0s (1529 kB/s) dpkg-name: info: moved 'libcxsparse4_1%3a7.12.2+dfsg-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmplt2sawyp/libcxsparse4_7.12.2+dfsg-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 tar riscv64 1.35+dfsg-3.1 [822 kB] Fetched 822 kB in 0s (8231 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk0a56u20/tar_1.35+dfsg-3.1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb1-dev riscv64 1.17.0-2+b2 [263 kB] Fetched 263 kB in 0s (3772 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdzw3prhx/libxcb1-dev_1.17.0-2+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libproc2-0 riscv64 2:4.0.4-9+b1 [65.1 kB] Fetched 65.1 kB in 0s (1129 kB/s) dpkg-name: info: moved 'libproc2-0_2%3a4.0.4-9+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpsh4032vr/libproc2-0_4.0.4-9+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libsframe3 riscv64 2.46-1 [85.7 kB] Fetched 85.7 kB in 0s (1459 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8n2bc327/libsframe3_2.46-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libmodule-pluggable-perl all 5.2-5 [23.0 kB] Fetched 23.0 kB in 0s (385 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyg29tfyp/libmodule-pluggable-perl_5.2-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 fontconfig riscv64 2.17.1-5 [190 kB] Fetched 190 kB in 0s (2830 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu5vydkly/fontconfig_2.17.1-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libnss3 riscv64 2:3.120-1 [1489 kB] Fetched 1489 kB in 0s (10.9 MB/s) dpkg-name: info: moved 'libnss3_2%3a3.120-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp2qjg2tig/libnss3_3.120-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfile-libmagic-perl riscv64 1.23-2+b2 [30.9 kB] Fetched 30.9 kB in 0s (535 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3e85lkcv/libfile-libmagic-perl_1.23-2+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libvorbis0a riscv64 1.3.7-3+b1 [89.8 kB] Fetched 89.8 kB in 0s (1485 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmto8k8ib/libvorbis0a_1.3.7-3+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdav1d7 riscv64 1.5.3-1+b1 [257 kB] Fetched 257 kB in 0s (3772 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpofrz7m6r/libdav1d7_1.5.3-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxmuu1 riscv64 2:1.1.3-4 [21.6 kB] Fetched 21.6 kB in 0s (391 kB/s) dpkg-name: info: moved 'libxmuu1_2%3a1.1.3-4_riscv64.deb' to '/srv/rebuilderd/tmp/tmpul1k_7_6/libxmuu1_1.1.3-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libidn2-dev riscv64 2.3.8-4+b1 [142 kB] Fetched 142 kB in 0s (2293 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp492jogye/libidn2-dev_2.3.8-4+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libinput-bin riscv64 1.31.0-1 [28.7 kB] Fetched 28.7 kB in 0s (511 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr2gfo3sv/libinput-bin_1.31.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libnet-netmask-perl all 2.0003-1 [28.5 kB] Fetched 28.5 kB in 0s (508 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgki2s58y/libnet-netmask-perl_2.0003-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libreadline8t64 riscv64 8.3-4 [180 kB] Fetched 180 kB in 0s (2283 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxint1fee/libreadline8t64_8.3-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfribidi0 riscv64 1.0.16-5 [27.8 kB] Fetched 27.8 kB in 0s (488 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsbd5n52f/libfribidi0_1.0.16-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libwebpmux3 riscv64 1.5.0-0.1+b1 [126 kB] Fetched 126 kB in 0s (2066 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5xrfbxo7/libwebpmux3_1.5.0-0.1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libwww-perl all 6.81-1 [186 kB] Fetched 186 kB in 0s (2758 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp042z6ebn/libwww-perl_6.81-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 dwz riscv64 0.16-2 [115 kB] Fetched 115 kB in 0s (1871 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzef3mic6/dwz_0.16-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libberkeleydb-perl riscv64 0.66-2 [118 kB] Fetched 118 kB in 0s (1940 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2cnspy2j/libberkeleydb-perl_0.66-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsamplerate0 riscv64 0.2.2-4+b3 [948 kB] Fetched 948 kB in 0s (8418 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm6uzf3tq/libsamplerate0_0.2.2-4+b3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libconfig-tiny-perl all 2.30-1 [18.9 kB] Fetched 18.9 kB in 0s (334 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8f6e4382/libconfig-tiny-perl_2.30-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 binutils riscv64 2.46-1 [285 kB] Fetched 285 kB in 0s (3926 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1tt530e5/binutils_2.46-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libp11-kit0 riscv64 0.25.10-1+b1 [450 kB] Fetched 450 kB in 0s (5540 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1c2njhcw/libp11-kit0_0.25.10-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libjxl0.11 riscv64 0.11.1-6 [1051 kB] Fetched 1051 kB in 0s (9450 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprixiommb/libjxl0.11_0.11.1-6_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libjpeg62-turbo riscv64 1:2.1.5-4 [155 kB] Fetched 155 kB in 0s (2463 kB/s) dpkg-name: info: moved 'libjpeg62-turbo_1%3a2.1.5-4_riscv64.deb' to '/srv/rebuilderd/tmp/tmph4bhm89k/libjpeg62-turbo_2.1.5-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 librhash1 riscv64 1.4.6-1.1 [143 kB] Fetched 143 kB in 0s (2301 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8i2dt3sy/librhash1_1.4.6-1.1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-randr0 riscv64 1.17.0-2+b2 [117 kB] Fetched 117 kB in 0s (1879 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdqbylt0r/libxcb-randr0_1.17.0-2+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdata-dpath-perl all 0.60-1 [41.8 kB] Fetched 41.8 kB in 0s (736 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx13rvkyl/libdata-dpath-perl_0.60-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 nettle-dev riscv64 3.10.2-1 [1557 kB] Fetched 1557 kB in 0s (11.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_zt_cf8x/nettle-dev_3.10.2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 ncurses-base all 6.6+20251231-1 [277 kB] Fetched 277 kB in 0s (3623 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnz55y6ei/ncurses-base_6.6+20251231-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Fetched 15.1 kB in 0s (257 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfhn3j6j5/libxml-namespacesupport-perl_1.12-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libevdev2 riscv64 1.13.6+dfsg-1 [29.9 kB] Fetched 29.9 kB in 0s (437 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwzwra5a5/libevdev2_1.13.6+dfsg-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libkrb5-dev riscv64 1.22.1-2 [16.2 kB] Fetched 16.2 kB in 0s (295 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw6xbkg9z/libkrb5-dev_1.22.1-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libbinutils riscv64 2.46-1 [509 kB] Fetched 509 kB in 0s (6220 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpacd3m38f/libbinutils_2.46-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libstring-rewriteprefix-perl all 0.009-1 [7140 B] Fetched 7140 B in 0s (130 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqaq97rcj/libstring-rewriteprefix-perl_0.009-1_all.deb' Downloading dependency 1 of 747: libc-dev-bin:riscv64=2.42-13 Downloading dependency 2 of 747: libxml-sax-perl:riscv64=1.02+dfsg-4 Downloading dependency 3 of 747: hostname:riscv64=3.25 Downloading dependency 4 of 747: libgl-dev:riscv64=1.7.0-3 Downloading dependency 5 of 747: libegl-mesa0:riscv64=26.0.0-1 Downloading dependency 6 of 747: libavahi-common3:riscv64=0.8-18 Downloading dependency 7 of 747: libconfig-model-dpkg-perl:riscv64=3.017 Downloading dependency 8 of 747: t1utils:riscv64=1.41-4+b1 Downloading dependency 9 of 747: libcdt6:riscv64=14.1.2-1 Downloading dependency 10 of 747: gcc-riscv64-linux-gnu:riscv64=4:15.2.0-5 Downloading dependency 11 of 747: g++-riscv64-linux-gnu:riscv64=4:15.2.0-5 Downloading dependency 12 of 747: libicu76:riscv64=76.1-4+b1 Downloading dependency 13 of 747: libqt6dbus6:riscv64=6.9.2+dfsg-4 Downloading dependency 14 of 747: zip:riscv64=3.0-15 Downloading dependency 15 of 747: python3-dev:riscv64=3.13.9-3 Downloading dependency 16 of 747: libx11-dev:riscv64=2:1.8.12-1+b1 Downloading dependency 17 of 747: liblist-utilsby-perl:riscv64=0.12-2 Downloading dependency 18 of 747: libgvplugin-pango8:riscv64=14.1.2-1 Downloading dependency 19 of 747: libyaml-tiny-perl:riscv64=1.76-1 Downloading dependency 20 of 747: libcpanel-json-xs-perl:riscv64=4.40-1 Downloading dependency 21 of 747: libtcl8.6:riscv64=8.6.17+dfsg-1+b1 Downloading dependency 22 of 747: debianutils:riscv64=5.23.2 Downloading dependency 23 of 747: libxinerama1:riscv64=2:1.1.4-3+b5 Downloading dependency 24 of 747: libpython3-stdlib:riscv64=3.13.9-3 Downloading dependency 25 of 747: libkrb5-3:riscv64=1.22.1-2 Downloading dependency 26 of 747: libfeature-compat-try-perl:riscv64=0.05-1 Downloading dependency 27 of 747: libssh2-1t64:riscv64=1.11.1-1+b1 Downloading dependency 28 of 747: libsoftware-license-perl:riscv64=0.104007-1 Downloading dependency 29 of 747: libxmlb2:riscv64=0.3.24-2 Downloading dependency 30 of 747: libglx-dev:riscv64=1.7.0-3 Downloading dependency 31 of 747: liberror-perl:riscv64=0.17030-1 Downloading dependency 32 of 747: libcurl3t64-gnutls:riscv64=8.18.0-2 Downloading dependency 33 of 747: base-files:riscv64=14 Downloading dependency 34 of 747: liblist-moreutils-perl:riscv64=0.430-2 Downloading dependency 35 of 747: libxpm4:riscv64=1:3.5.17-1+b4 Downloading dependency 36 of 747: bsdextrautils:riscv64=2.41.3-3 Downloading dependency 37 of 747: file:riscv64=1:5.46-5+b1 Downloading dependency 38 of 747: libnet-http-perl:riscv64=6.24-1 Downloading dependency 39 of 747: libctf0:riscv64=2.46-1 Downloading dependency 40 of 747: libimagequant0:riscv64=4.4.1-1+b1 Downloading dependency 41 of 747: librole-tiny-perl:riscv64=2.002004-1 Downloading dependency 42 of 747: autotools-dev:riscv64=20240727.1 Downloading dependency 43 of 747: libbrotli1:riscv64=1.2.0-3 Downloading dependency 44 of 747: libstemmer0d:riscv64=3.0.1-1+b1 Downloading dependency 45 of 747: coreutils:riscv64=9.7-3 Downloading dependency 46 of 747: autopoint:riscv64=0.23.2-1 Downloading dependency 47 of 747: libencode-locale-perl:riscv64=1.05-3 Downloading dependency 48 of 747: libmodule-implementation-perl:riscv64=0.09-2 Downloading dependency 49 of 747: libxcb-sync1:riscv64=1.17.0-2+b2 Downloading dependency 50 of 747: libxcb-xkb1:riscv64=1.17.0-2+b2 Downloading dependency 51 of 747: libkadm5clnt-mit12:riscv64=1.22.1-2 Downloading dependency 52 of 747: libdb5.3t64:riscv64=5.3.28+dfsg2-11 Downloading dependency 53 of 747: ncurses-bin:riscv64=6.6+20251231-1 Downloading dependency 54 of 747: mawk:riscv64=1.3.4.20260129-1 Downloading dependency 55 of 747: libjson-maybexs-perl:riscv64=1.004008-1 Downloading dependency 56 of 747: libxcb-image0:riscv64=0.4.0-2+b3 Downloading dependency 57 of 747: libicu-dev:riscv64=76.1-4+b1 Downloading dependency 58 of 747: libcurl4-openssl-dev:riscv64=8.18.0-2 Downloading dependency 59 of 747: liblog-any-adapter-screen-perl:riscv64=0.141-2 Downloading dependency 60 of 747: libnet-domain-tld-perl:riscv64=1.75-4 Downloading dependency 61 of 747: libngtcp2-crypto-gnutls8:riscv64=1.16.0-1 Downloading dependency 62 of 747: libhttp-message-perl:riscv64=7.01-1 Downloading dependency 63 of 747: libxcursor1:riscv64=1:1.2.3-1+b1 Downloading dependency 64 of 747: liblwp-mediatypes-perl:riscv64=6.04-2 Downloading dependency 65 of 747: libpam-modules-bin:riscv64=1.7.0-5+b1 Downloading dependency 66 of 747: libisl23:riscv64=0.27-1+b1 Downloading dependency 67 of 747: gcc-15-base:riscv64=15.2.0-13 Downloading dependency 68 of 747: perl:riscv64=5.40.1-7 Downloading dependency 69 of 747: libglx-mesa0:riscv64=26.0.0-1 Downloading dependency 70 of 747: libxml-libxml-perl:riscv64=2.0207+dfsg+really+2.0134-7 Downloading dependency 71 of 747: java-common:riscv64=0.76 Downloading dependency 72 of 747: libqt6openglwidgets6:riscv64=6.9.2+dfsg-4 Downloading dependency 73 of 747: libpsl5t64:riscv64=0.21.2-1.1+b2 Downloading dependency 74 of 747: libpod-constants-perl:riscv64=0.19-2 Downloading dependency 75 of 747: libarray-intspan-perl:riscv64=2.004-2 Downloading dependency 76 of 747: libvariable-magic-perl:riscv64=0.64-1+b1 Downloading dependency 77 of 747: libgl1:riscv64=1.7.0-3 Downloading dependency 78 of 747: libalgorithm-c3-perl:riscv64=0.11-2 Downloading dependency 79 of 747: libfontconfig1:riscv64=2.17.1-5 Downloading dependency 80 of 747: openssl:riscv64=3.5.5-1 Downloading dependency 81 of 747: automake:riscv64=1:1.18.1-3 Downloading dependency 82 of 747: libxs-parse-keyword-perl:riscv64=0.49-1 Downloading dependency 83 of 747: libdevel-callchecker-perl:riscv64=0.009-3 Downloading dependency 84 of 747: libcholmod5:riscv64=1:7.12.2+dfsg-1 Downloading dependency 85 of 747: libtasn1-6:riscv64=4.21.0-2 Downloading dependency 86 of 747: libcxsparse4:riscv64=1:7.12.2+dfsg-1 Downloading dependency 87 of 747: tar:riscv64=1.35+dfsg-3.1 Downloading dependency 88 of 747: libxcb1-dev:riscv64=1.17.0-2+b2 Downloading dependency 89 of 747: libproc2-0:riscv64=2:4.0.4-9+b1 Downloading dependency 90 of 747: libsframe3:riscv64=2.46-1 Downloading dependency 91 of 747: libmodule-pluggable-perl:riscv64=5.2-5 Downloading dependency 92 of 747: fontconfig:riscv64=2.17.1-5 Downloading dependency 93 of 747: libnss3:riscv64=2:3.120-1 Downloading dependency 94 of 747: libfile-libmagic-perl:riscv64=1.23-2+b2 Downloading dependency 95 of 747: libvorbis0a:riscv64=1.3.7-3+b1 Downloading dependency 96 of 747: libdav1d7:riscv64=1.5.3-1+b1 Downloading dependency 97 of 747: libxmuu1:riscv64=2:1.1.3-4 Downloading dependency 98 of 747: libidn2-dev:riscv64=2.3.8-4+b1 Downloading dependency 99 of 747: libinput-bin:riscv64=1.31.0-1 Downloading dependency 100 of 747: libnet-netmask-perl:riscv64=2.0003-1 Downloading dependency 101 of 747: libreadline8t64:riscv64=8.3-4 Downloading dependency 102 of 747: libfribidi0:riscv64=1.0.16-5 Downloading dependency 103 of 747: libwebpmux3:riscv64=1.5.0-0.1+b1 Downloading dependency 104 of 747: libwww-perl:riscv64=6.81-1 Downloading dependency 105 of 747: dwz:riscv64=0.16-2 Downloading dependency 106 of 747: libberkeleydb-perl:riscv64=0.66-2 Downloading dependency 107 of 747: libsamplerate0:riscv64=0.2.2-4+b3 Downloading dependency 108 of 747: libconfig-tiny-perl:riscv64=2.30-1 Downloading dependency 109 of 747: binutils:riscv64=2.46-1 Downloading dependency 110 of 747: libp11-kit0:riscv64=0.25.10-1+b1 Downloading dependency 111 of 747: libjxl0.11:riscv64=0.11.1-6 Downloading dependency 112 of 747: libjpeg62-turbo:riscv64=1:2.1.5-4 Downloading dependency 113 of 747: librhash1:riscv64=1.4.6-1.1 Downloading dependency 114 of 747: libxcb-randr0:riscv64=1.17.0-2+b2 Downloading dependency 115 of 747: libdata-dpath-perl:riscv64=0.60-1 Downloading dependency 116 of 747: nettle-dev:riscv64=3.10.2-1 Downloading dependency 117 of 747: ncurses-base:riscv64=6.6+20251231-1 Downloading dependency 118 of 747: libxml-namespacesupport-perl:riscv64=1.12-2 Downloading dependency 119 of 747: libevdev2:riscv64=1.13.6+dfsg-1 Downloading dependency 120 of 747: libkrb5-dev:riscv64=1.22.1-2 Downloading dependency 121 of 747: libbinutils:riscv64=2.46-1 Downloading dependency 122 of 747: libstring-rewriteprefix-perl:riscv64=0.009-1 Downloading dependency 123 of 747: libtext-levenshtein-damerau-perl:riscv64=0.41-3Get:1 http://deb.debian.org/debian unstable/main riscv64 libtext-levenshtein-damerau-perl all 0.41-3 [12.3 kB] Fetched 12.3 kB in 0s (224 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpor8eh8xc/libtext-levenshtein-damerau-perl_0.41-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-dri3-0 riscv64 1.17.0-2+b2 [107 kB] Fetched 107 kB in 0s (1694 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpowotvjwk/libxcb-dri3-0_1.17.0-2+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 gnuplot-nox riscv64 6.0.3+dfsg1-1 [923 kB] Fetched 923 kB in 0s (8894 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgz2q2x6b/gnuplot-nox_6.0.3+dfsg1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsoftware-copyright-perl all 0.015-1 [15.5 kB] Fetched 15.5 kB in 0s (280 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7dsmp7kk/libsoftware-copyright-perl_0.015-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libqt6xml6 riscv64 6.9.2+dfsg-4 [88.1 kB] Fetched 88.1 kB in 0s (1460 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw6yp3nfw/libqt6xml6_6.9.2+dfsg-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 linux-libc-dev all 6.18.12-1 [2574 kB] Fetched 2574 kB in 0s (13.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9u995g2w/linux-libc-dev_6.18.12-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libclass-tiny-perl all 1.008-2 [18.6 kB] Fetched 18.6 kB in 0s (323 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqhg03dg1/libclass-tiny-perl_1.008-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcapture-tiny-perl all 0.50-1 [24.6 kB] Fetched 24.6 kB in 0s (444 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplwm0kgt7/libcapture-tiny-perl_0.50-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libctf-nobfd0 riscv64 2.46-1 [163 kB] Fetched 163 kB in 0s (2569 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5cix_3g1/libctf-nobfd0_2.46-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Fetched 26.4 kB in 0s (383 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphlbkusi8/libdevel-stacktrace-perl_2.0500-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libclass-c3-perl all 0.35-2 [21.0 kB] Fetched 21.0 kB in 0s (376 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcitfi5v0/libclass-c3-perl_0.35-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libelf1t64 riscv64 0.194-1 [190 kB] Fetched 190 kB in 0s (2918 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf0nv5r2p/libelf1t64_0.194-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libevent-2.1-7t64 riscv64 2.1.12-stable-10+b2 [183 kB] Fetched 183 kB in 0s (2839 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx3hd6sp4/libevent-2.1-7t64_2.1.12-stable-10+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libarchive-zip-perl all 1.68-1 [104 kB] Fetched 104 kB in 0s (1734 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9dj8agil/libarchive-zip-perl_1.68-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libipc-run3-perl all 0.049-1 [31.5 kB] Fetched 31.5 kB in 0s (542 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmmwacsp8/libipc-run3-perl_0.049-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 m4 riscv64 1.4.21-1 [330 kB] Fetched 330 kB in 0s (4562 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgdoh260z/m4_1.4.21-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libgprofng0 riscv64 2.46-1 [723 kB] Fetched 723 kB in 0s (7347 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_m7gp1w7/libgprofng0_2.46-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpkgconf7 riscv64 2.5.1-4 [47.1 kB] Fetched 47.1 kB in 0s (835 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbz6iaief/libpkgconf7_2.5.1-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgav1-2 riscv64 0.20.0-2 [344 kB] Fetched 344 kB in 0s (4804 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2y0zgz97/libgav1-2_0.20.0-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libaom3 riscv64 3.13.1-2 [1313 kB] Fetched 1313 kB in 0s (10.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1b9mo0es/libaom3_3.13.1-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libglvnd0 riscv64 1.7.0-3 [62.0 kB] Fetched 62.0 kB in 0s (1046 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe2ybamcp/libglvnd0_1.7.0-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 swig riscv64 4.4.0-1 [1459 kB] Fetched 1459 kB in 0s (10.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzaa7txf9/swig_4.4.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libconst-fast-perl all 0.014-2 [8792 B] Fetched 8792 B in 0s (154 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9ss4toxb/libconst-fast-perl_0.014-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libdebhelper-perl all 13.30 [92.7 kB] Fetched 92.7 kB in 0s (1579 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbxsmf4x1/libdebhelper-perl_13.30_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libarchive13t64 riscv64 3.8.5-1 [377 kB] Fetched 377 kB in 0s (5058 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9_av13fr/libarchive13t64_3.8.5-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfftw3-bin riscv64 3.3.10-2+b2 [44.7 kB] Fetched 44.7 kB in 0s (773 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptjbj6jso/libfftw3-bin_3.3.10-2+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsm6 riscv64 2:1.2.6-1+b1 [38.1 kB] Fetched 38.1 kB in 0s (658 kB/s) dpkg-name: info: moved 'libsm6_2%3a1.2.6-1+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp_hbr57j7/libsm6_1.2.6-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libx11-6 riscv64 2:1.8.12-1+b1 [821 kB] Fetched 821 kB in 0s (8381 kB/s) dpkg-name: info: moved 'libx11-6_2%3a1.8.12-1+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpx3qmg9pd/libx11-6_1.8.12-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfile-find-rule-perl all 0.35-1 [25.9 kB] Fetched 25.9 kB in 0s (450 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph8fz2xoj/libfile-find-rule-perl_0.35-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 dpkg-dev all 1.23.5 [1318 kB] Fetched 1318 kB in 0s (10.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0qrv7fca/dpkg-dev_1.23.5_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxdot4 riscv64 14.1.2-1 [21.7 kB] Fetched 21.7 kB in 0s (381 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb4fl7ixd/libxdot4_14.1.2-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 tzdata all 2025c-3 [263 kB] Fetched 263 kB in 0s (3782 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd1ozo5y_/tzdata_2025c-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libmount1 riscv64 2.41.3-3 [226 kB] Fetched 226 kB in 0s (3404 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp97qq44au/libmount1_2.41.3-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libparse-debcontrol-perl all 2.005-6 [21.6 kB] Fetched 21.6 kB in 0s (393 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptxmprxng/libparse-debcontrol-perl_2.005-6_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libclang-cpp21 riscv64 1:21.1.8-3 [12.8 MB] Fetched 12.8 MB in 1s (16.7 MB/s) dpkg-name: info: moved 'libclang-cpp21_1%3a21.1.8-3_riscv64.deb' to '/srv/rebuilderd/tmp/tmp_3nv3kgn/libclang-cpp21_21.1.8-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libamd3 riscv64 1:7.12.2+dfsg-1 [50.3 kB] Fetched 50.3 kB in 0s (877 kB/s) dpkg-name: info: moved 'libamd3_1%3a7.12.2+dfsg-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmptwfz2ngv/libamd3_7.12.2+dfsg-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libasan8 riscv64 15.2.0-13 [2937 kB] Fetched 2937 kB in 0s (13.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0hd2nqpo/libasan8_15.2.0-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libnumber-compare-perl all 0.03-3 [6332 B] Fetched 6332 B in 0s (107 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfdt3qach/libnumber-compare-perl_0.03-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsoftware-licensemoreutils-perl all 1.009-1 [22.0 kB] Fetched 22.0 kB in 0s (395 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdci6wn1p/libsoftware-licensemoreutils-perl_1.009-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 perl-modules-5.40 all 5.40.1-7 [3012 kB] Fetched 3012 kB in 0s (13.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbnajrr_6/perl-modules-5.40_5.40.1-7_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhash-merge-perl all 0.302-1 [14.7 kB] Fetched 14.7 kB in 0s (235 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8i6r_zkv/libhash-merge-perl_0.302-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsafe-isa-perl all 1.000010-1 [8288 B] Fetched 8288 B in 0s (148 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdihjruwh/libsafe-isa-perl_1.000010-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libimport-into-perl all 1.002005-2 [11.3 kB] Fetched 11.3 kB in 0s (209 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpozuqa2to/libimport-into-perl_1.002005-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libksba8 riscv64 1.6.7-2+b2 [136 kB] Fetched 136 kB in 0s (2189 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoxzhqkuh/libksba8_1.6.7-2+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libp11-kit-dev riscv64 0.25.10-1+b1 [221 kB] Fetched 221 kB in 0s (3285 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1laxl33o/libp11-kit-dev_0.25.10-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfyaml0 riscv64 0.9.4-1 [287 kB] Fetched 287 kB in 0s (4106 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp90cana_0/libfyaml0_0.9.4-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxft2 riscv64 2.3.6-1+b5 [52.7 kB] Fetched 52.7 kB in 0s (914 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe45763jr/libxft2_2.3.6-1+b5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-glx0 riscv64 1.17.0-2+b2 [123 kB] Fetched 123 kB in 0s (2016 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_voheo70/libxcb-glx0_1.17.0-2+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmodule-runtime-perl all 0.018-1 [17.8 kB] Fetched 17.8 kB in 0s (313 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxfhhw5wc/libmodule-runtime-perl_0.018-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 perl-openssl-defaults riscv64 7+b2 [6724 B] Fetched 6724 B in 0s (118 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5ols47sr/perl-openssl-defaults_7+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcolamd3 riscv64 1:7.12.2+dfsg-1 [41.5 kB] Fetched 41.5 kB in 0s (721 kB/s) dpkg-name: info: moved 'libcolamd3_1%3a7.12.2+dfsg-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpo4e5o1tw/libcolamd3_7.12.2+dfsg-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxrender1 riscv64 1:0.9.12-1+b1 [28.3 kB] Fetched 28.3 kB in 0s (507 kB/s) dpkg-name: info: moved 'libxrender1_1%3a0.9.12-1+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp4_acnw08/libxrender1_0.9.12-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Fetched 20.6 kB in 0s (369 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiq8xzdm8/libxml-sax-base-perl_1.09-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcairo2 riscv64 1.18.4-3 [546 kB] Fetched 546 kB in 0s (6517 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1l9bhwk8/libcairo2_1.18.4-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpath-iterator-rule-perl all 1.015-2 [41.7 kB] Fetched 41.7 kB in 0s (716 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpknlqxqyc/libpath-iterator-rule-perl_1.015-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libnghttp3-9 riscv64 1.12.0-1 [68.4 kB] Fetched 68.4 kB in 0s (1135 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfyo9v07m/libnghttp3-9_1.12.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 patchutils riscv64 0.4.3-1 [77.0 kB] Fetched 77.0 kB in 0s (1297 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwgoa2am9/patchutils_0.4.3-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libuuid1 riscv64 2.41.3-3 [40.3 kB] Fetched 40.3 kB in 0s (724 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm7nhd6l7/libuuid1_2.41.3-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 xdg-utils all 1.2.1-2 [75.8 kB] Fetched 75.8 kB in 0s (1303 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2wmix7tt/xdg-utils_1.2.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libapp-cmd-perl all 0.338-1 [61.7 kB] Fetched 61.7 kB in 0s (1073 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7znvrhxx/libapp-cmd-perl_0.338-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdrm-amdgpu1 riscv64 2.4.131-1 [23.8 kB] Fetched 23.8 kB in 0s (433 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi8ew7kwu/libdrm-amdgpu1_2.4.131-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpam-modules riscv64 1.7.0-5+b1 [176 kB] Fetched 176 kB in 0s (2767 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7_j5nw67/libpam-modules_1.7.0-5+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 cmake-data all 4.2.3-2 [2556 kB] Fetched 2556 kB in 0s (13.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj3wkxjhj/cmake-data_4.2.3-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 groff-base riscv64 1.23.0-10 [1163 kB] Fetched 1163 kB in 0s (9898 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpod1x7sis/groff-base_1.23.0-10_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libattr1 riscv64 1:2.5.2-4 [23.0 kB] Fetched 23.0 kB in 0s (403 kB/s) dpkg-name: info: moved 'libattr1_1%3a2.5.2-4_riscv64.deb' to '/srv/rebuilderd/tmp/tmp4z100u24/libattr1_2.5.2-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libterm-readkey-perl riscv64 2.38-2+b3 [24.8 kB] Fetched 24.8 kB in 0s (429 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo27roved/libterm-readkey-perl_2.38-2+b3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcgi-pm-perl all 4.71-1 [217 kB] Fetched 217 kB in 0s (3194 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeolz5ea1/libcgi-pm-perl_4.71-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 gpg riscv64 2.4.8-5 [631 kB] Fetched 631 kB in 0s (6995 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpltzkqggb/gpg_2.4.8-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libsz2 riscv64 1.1.5-1 [19.2 kB] Fetched 19.2 kB in 0s (345 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpom5tt05o/libsz2_1.1.5-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 default-jdk-headless riscv64 2:1.21-76 [1124 B] Fetched 1124 B in 0s (20.7 kB/s) dpkg-name: info: moved 'default-jdk-headless_2%3a1.21-76_riscv64.deb' to '/srv/rebuilderd/tmp/tmp7eo2rz48/default-jdk-headless_1.21-76_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libaec0 riscv64 1.1.5-1 [23.7 kB] Fetched 23.7 kB in 0s (426 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaipsd6kp/libaec0_1.1.5-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhdf5-hl-fortran-310 riscv64 1.14.6+repack-2 [39.1 kB] Fetched 39.1 kB in 0s (698 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9frfghyr/libhdf5-hl-fortran-310_1.14.6+repack-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libk5crypto3 riscv64 1.22.1-2 [98.4 kB] Fetched 98.4 kB in 0s (1643 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7vg0dfyn/libk5crypto3_1.22.1-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libncurses6 riscv64 6.6+20251231-1 [105 kB] Fetched 105 kB in 0s (1728 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkj_reoav/libncurses6_6.6+20251231-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libqscintilla2-qt6-15 riscv64 2.14.1+dfsg-2 [1230 kB] Fetched 1230 kB in 0s (10.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpos2_jsdx/libqscintilla2-qt6-15_2.14.1+dfsg-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdata-section-perl all 0.200008-1 [13.1 kB] Fetched 13.1 kB in 0s (235 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8w7r0gwy/libdata-section-perl_0.200008-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libtimedate-perl all 2.3300-2 [39.3 kB] Fetched 39.3 kB in 0s (702 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptbnp5_x8/libtimedate-perl_2.3300-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 diffutils riscv64 1:3.12-1 [405 kB] Fetched 405 kB in 0s (5352 kB/s) dpkg-name: info: moved 'diffutils_1%3a3.12-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp2_l2bzx8/diffutils_3.12-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-minimal riscv64 3.13.9-3 [27.6 kB] Fetched 27.6 kB in 0s (491 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm3xyiadt/python3-minimal_3.13.9-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 aglfn all 1.7+git20191031.4036a9c-2 [30.5 kB] Fetched 30.5 kB in 0s (539 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy73xeu21/aglfn_1.7+git20191031.4036a9c-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Fetched 18.8 kB in 0s (335 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcz7parug/libiterator-perl_0.03+ds1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libstdc++6 riscv64 15.2.0-13 [715 kB] Fetched 715 kB in 0s (7519 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2ydofxi_/libstdc++6_15.2.0-13_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libgnutls30t64 riscv64 3.8.12-2 [1490 kB] Fetched 1490 kB in 0s (11.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0zn_xj83/libgnutls30t64_3.8.12-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxxf86vm1 riscv64 1:1.1.4-2 [20.3 kB] Fetched 20.3 kB in 0s (366 kB/s) dpkg-name: info: moved 'libxxf86vm1_1%3a1.1.4-2_riscv64.deb' to '/srv/rebuilderd/tmp/tmpxck8tqzp/libxxf86vm1_1.1.4-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libconfig-inifiles-perl all 3.000003-4 [44.9 kB] Fetched 44.9 kB in 0s (793 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl79pvoyj/libconfig-inifiles-perl_3.000003-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libio-html-perl all 1.004-3 [16.2 kB] Fetched 16.2 kB in 0s (281 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6bci1my3/libio-html-perl_1.004-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libyaml-libyaml-perl riscv64 0.904.0+ds-1 [46.6 kB] Fetched 46.6 kB in 0s (816 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp93q_6m9h/libyaml-libyaml-perl_0.904.0+ds-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3.13 riscv64 3.13.12-1 [776 kB] Fetched 776 kB in 0s (7181 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsa8d7um1/python3.13_3.13.12-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpipeline1 riscv64 1.5.8-2 [40.8 kB] Fetched 40.8 kB in 0s (725 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4mrehkdj/libpipeline1_1.5.8-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 perl-base riscv64 5.40.1-7 [1678 kB] Fetched 1678 kB in 0s (11.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpajq74lt_/perl-base_5.40.1-7_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblapack3 riscv64 3.12.1-7+b1 [1971 kB] Fetched 1971 kB in 0s (12.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_7wt4t30/liblapack3_3.12.1-7+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3-dev riscv64 3.13.9-3 [10.8 kB] Fetched 10.8 kB in 0s (194 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsoeg1ink/libpython3-dev_3.13.9-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 xtrans-dev all 1.6.0-1 [93.5 kB] Fetched 93.5 kB in 0s (1581 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuk2_1hw5/xtrans-dev_1.6.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libdbus-1-3 riscv64 1.16.2-3 [180 kB] Fetched 180 kB in 0s (2770 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqznr3sxi/libdbus-1-3_1.16.2-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libnghttp2-14 riscv64 1.68.0-1 [79.5 kB] Fetched 79.5 kB in 0s (1359 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuk_3lujq/libnghttp2-14_1.68.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtirpc3t64 riscv64 1.3.6+ds-1 [86.0 kB] Fetched 86.0 kB in 0s (1458 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4m53dt4c/libtirpc3t64_1.3.6+ds-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 readline-common all 8.3-4 [74.8 kB] Fetched 74.8 kB in 0s (1159 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwsqhpx1f/readline-common_8.3-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfeature-compat-class-perl all 0.08-1 [12.4 kB] Fetched 12.4 kB in 0s (221 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq4liu9rn/libfeature-compat-class-perl_0.08-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtext-unidecode-perl all 1.30-3 [101 kB] Fetched 101 kB in 0s (1697 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_quf7jy5/libtext-unidecode-perl_1.30-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxml2-16 riscv64 2.15.1+dfsg-2+b1 [637 kB] Fetched 637 kB in 0s (7053 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpymnmjycl/libxml2-16_2.15.1+dfsg-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpam0g riscv64 1.7.0-5+b1 [70.7 kB] Fetched 70.7 kB in 0s (1205 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp417k25g1/libpam0g_1.7.0-5+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsort-versions-perl all 1.62-3 [8928 B] Fetched 8928 B in 0s (163 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc9cdne3c/libsort-versions-perl_1.62-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmtdev1t64 riscv64 1.1.7-1+b1 [22.8 kB] Fetched 22.8 kB in 0s (402 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgei6poa2/libmtdev1t64_1.1.7-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtext-levenshteinxs-perl riscv64 0.03-5+b3 [8528 B] Fetched 8528 B in 0s (155 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfqpg0b3m/libtext-levenshteinxs-perl_0.03-5+b3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libqt6widgets6 riscv64 6.9.2+dfsg-4 [2736 kB] Fetched 2736 kB in 0s (13.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmxozhhs0/libqt6widgets6_6.9.2+dfsg-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhtml-form-perl all 6.13-1 [32.6 kB] Fetched 32.6 kB in 0s (579 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk0y8kqlu/libhtml-form-perl_6.13-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsereal-decoder-perl riscv64 5.004+ds-1+b4 [104 kB] Fetched 104 kB in 0s (1722 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaxfgjkwu/libsereal-decoder-perl_5.004+ds-1+b4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3.13-dev riscv64 3.13.12-1 [16.7 MB] Fetched 16.7 MB in 1s (17.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpthzzloi7/libpython3.13-dev_3.13.12-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 appstream riscv64 1.1.2-1 [566 kB] Fetched 566 kB in 0s (6360 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8m28rjm4/appstream_1.1.2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdouble-conversion3 riscv64 3.4.0-1 [42.3 kB] Fetched 42.3 kB in 0s (725 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjuae_eif/libdouble-conversion3_3.4.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-util1 riscv64 0.4.1-1+b1 [23.4 kB] Fetched 23.4 kB in 0s (422 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7ranzbs4/libxcb-util1_0.4.1-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libstring-copyright-perl all 0.003014-1 [23.4 kB] Fetched 23.4 kB in 0s (421 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplhyh9hxb/libstring-copyright-perl_0.003014-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libperl5.40 riscv64 5.40.1-7 [3952 kB] Fetched 3952 kB in 0s (14.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpspp8gvjm/libperl5.40_5.40.1-7_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libc6-dev riscv64 2.42-13 [3438 kB] Fetched 3438 kB in 0s (14.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpexv1qskw/libc6-dev_2.42-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libio-string-perl all 1.08-4 [12.1 kB] Fetched 12.1 kB in 0s (220 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppu5q8nfb/libio-string-perl_1.08-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 diffstat riscv64 1.68-1 [34.2 kB] Fetched 34.2 kB in 0s (619 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm9o1zhrg/diffstat_1.68-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libgcc-s1 riscv64 15.2.0-13 [61.5 kB] Fetched 61.5 kB in 0s (1044 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4eleoths/libgcc-s1_15.2.0-13_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libgnutls-openssl27t64 riscv64 3.8.12-2 [473 kB] Fetched 473 kB in 0s (5895 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3rrzdd3e/libgnutls-openssl27t64_3.8.12-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libqt6opengl6 riscv64 6.9.2+dfsg-4 [412 kB] Fetched 412 kB in 0s (5236 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0yxq5c_8/libqt6opengl6_6.9.2+dfsg-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtoml-tiny-perl all 0.20-1 [23.4 kB] Fetched 23.4 kB in 0s (416 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_ttt_cbs/libtoml-tiny-perl_0.20-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxfixes3 riscv64 1:6.0.0-2+b5 [20.3 kB] Fetched 20.3 kB in 0s (371 kB/s) dpkg-name: info: moved 'libxfixes3_1%3a6.0.0-2+b5_riscv64.deb' to '/srv/rebuilderd/tmp/tmpv1iz5cou/libxfixes3_6.0.0-2+b5_riscv64.deb' Downloading dependency 124 of 747: libxcb-dri3-0:riscv64=1.17.0-2+b2 Downloading dependency 125 of 747: gnuplot-nox:riscv64=6.0.3+dfsg1-1 Downloading dependency 126 of 747: libsoftware-copyright-perl:riscv64=0.015-1 Downloading dependency 127 of 747: libqt6xml6:riscv64=6.9.2+dfsg-4 Downloading dependency 128 of 747: linux-libc-dev:riscv64=6.18.12-1 Downloading dependency 129 of 747: libclass-tiny-perl:riscv64=1.008-2 Downloading dependency 130 of 747: libcapture-tiny-perl:riscv64=0.50-1 Downloading dependency 131 of 747: libctf-nobfd0:riscv64=2.46-1 Downloading dependency 132 of 747: libdevel-stacktrace-perl:riscv64=2.0500-1 Downloading dependency 133 of 747: libclass-c3-perl:riscv64=0.35-2 Downloading dependency 134 of 747: libelf1t64:riscv64=0.194-1 Downloading dependency 135 of 747: libevent-2.1-7t64:riscv64=2.1.12-stable-10+b2 Downloading dependency 136 of 747: libarchive-zip-perl:riscv64=1.68-1 Downloading dependency 137 of 747: libipc-run3-perl:riscv64=0.049-1 Downloading dependency 138 of 747: m4:riscv64=1.4.21-1 Downloading dependency 139 of 747: libgprofng0:riscv64=2.46-1 Downloading dependency 140 of 747: libpkgconf7:riscv64=2.5.1-4 Downloading dependency 141 of 747: libgav1-2:riscv64=0.20.0-2 Downloading dependency 142 of 747: libaom3:riscv64=3.13.1-2 Downloading dependency 143 of 747: libglvnd0:riscv64=1.7.0-3 Downloading dependency 144 of 747: swig:riscv64=4.4.0-1 Downloading dependency 145 of 747: libconst-fast-perl:riscv64=0.014-2 Downloading dependency 146 of 747: libdebhelper-perl:riscv64=13.30 Downloading dependency 147 of 747: libarchive13t64:riscv64=3.8.5-1 Downloading dependency 148 of 747: libfftw3-bin:riscv64=3.3.10-2+b2 Downloading dependency 149 of 747: libsm6:riscv64=2:1.2.6-1+b1 Downloading dependency 150 of 747: libx11-6:riscv64=2:1.8.12-1+b1 Downloading dependency 151 of 747: libfile-find-rule-perl:riscv64=0.35-1 Downloading dependency 152 of 747: dpkg-dev:riscv64=1.23.5 Downloading dependency 153 of 747: libxdot4:riscv64=14.1.2-1 Downloading dependency 154 of 747: tzdata:riscv64=2025c-3 Downloading dependency 155 of 747: libmount1:riscv64=2.41.3-3 Downloading dependency 156 of 747: libparse-debcontrol-perl:riscv64=2.005-6 Downloading dependency 157 of 747: libclang-cpp21:riscv64=1:21.1.8-3 Downloading dependency 158 of 747: libamd3:riscv64=1:7.12.2+dfsg-1 Downloading dependency 159 of 747: libasan8:riscv64=15.2.0-13 Downloading dependency 160 of 747: libnumber-compare-perl:riscv64=0.03-3 Downloading dependency 161 of 747: libsoftware-licensemoreutils-perl:riscv64=1.009-1 Downloading dependency 162 of 747: perl-modules-5.40:riscv64=5.40.1-7 Downloading dependency 163 of 747: libhash-merge-perl:riscv64=0.302-1 Downloading dependency 164 of 747: libsafe-isa-perl:riscv64=1.000010-1 Downloading dependency 165 of 747: libimport-into-perl:riscv64=1.002005-2 Downloading dependency 166 of 747: libksba8:riscv64=1.6.7-2+b2 Downloading dependency 167 of 747: libp11-kit-dev:riscv64=0.25.10-1+b1 Downloading dependency 168 of 747: libfyaml0:riscv64=0.9.4-1 Downloading dependency 169 of 747: libxft2:riscv64=2.3.6-1+b5 Downloading dependency 170 of 747: libxcb-glx0:riscv64=1.17.0-2+b2 Downloading dependency 171 of 747: libmodule-runtime-perl:riscv64=0.018-1 Downloading dependency 172 of 747: perl-openssl-defaults:riscv64=7+b2 Downloading dependency 173 of 747: libcolamd3:riscv64=1:7.12.2+dfsg-1 Downloading dependency 174 of 747: libxrender1:riscv64=1:0.9.12-1+b1 Downloading dependency 175 of 747: libxml-sax-base-perl:riscv64=1.09-3 Downloading dependency 176 of 747: libcairo2:riscv64=1.18.4-3 Downloading dependency 177 of 747: libpath-iterator-rule-perl:riscv64=1.015-2 Downloading dependency 178 of 747: libnghttp3-9:riscv64=1.12.0-1 Downloading dependency 179 of 747: patchutils:riscv64=0.4.3-1 Downloading dependency 180 of 747: libuuid1:riscv64=2.41.3-3 Downloading dependency 181 of 747: xdg-utils:riscv64=1.2.1-2 Downloading dependency 182 of 747: libapp-cmd-perl:riscv64=0.338-1 Downloading dependency 183 of 747: libdrm-amdgpu1:riscv64=2.4.131-1 Downloading dependency 184 of 747: libpam-modules:riscv64=1.7.0-5+b1 Downloading dependency 185 of 747: cmake-data:riscv64=4.2.3-2 Downloading dependency 186 of 747: groff-base:riscv64=1.23.0-10 Downloading dependency 187 of 747: libattr1:riscv64=1:2.5.2-4 Downloading dependency 188 of 747: libterm-readkey-perl:riscv64=2.38-2+b3 Downloading dependency 189 of 747: libcgi-pm-perl:riscv64=4.71-1 Downloading dependency 190 of 747: gpg:riscv64=2.4.8-5 Downloading dependency 191 of 747: libsz2:riscv64=1.1.5-1 Downloading dependency 192 of 747: default-jdk-headless:riscv64=2:1.21-76 Downloading dependency 193 of 747: libaec0:riscv64=1.1.5-1 Downloading dependency 194 of 747: libhdf5-hl-fortran-310:riscv64=1.14.6+repack-2 Downloading dependency 195 of 747: libk5crypto3:riscv64=1.22.1-2 Downloading dependency 196 of 747: libncurses6:riscv64=6.6+20251231-1 Downloading dependency 197 of 747: libqscintilla2-qt6-15:riscv64=2.14.1+dfsg-2 Downloading dependency 198 of 747: libdata-section-perl:riscv64=0.200008-1 Downloading dependency 199 of 747: libtimedate-perl:riscv64=2.3300-2 Downloading dependency 200 of 747: diffutils:riscv64=1:3.12-1 Downloading dependency 201 of 747: python3-minimal:riscv64=3.13.9-3 Downloading dependency 202 of 747: aglfn:riscv64=1.7+git20191031.4036a9c-2 Downloading dependency 203 of 747: libiterator-perl:riscv64=0.03+ds1-2 Downloading dependency 204 of 747: libstdc++6:riscv64=15.2.0-13 Downloading dependency 205 of 747: libgnutls30t64:riscv64=3.8.12-2 Downloading dependency 206 of 747: libxxf86vm1:riscv64=1:1.1.4-2 Downloading dependency 207 of 747: libconfig-inifiles-perl:riscv64=3.000003-4 Downloading dependency 208 of 747: libio-html-perl:riscv64=1.004-3 Downloading dependency 209 of 747: libyaml-libyaml-perl:riscv64=0.904.0+ds-1 Downloading dependency 210 of 747: python3.13:riscv64=3.13.12-1 Downloading dependency 211 of 747: libpipeline1:riscv64=1.5.8-2 Downloading dependency 212 of 747: perl-base:riscv64=5.40.1-7 Downloading dependency 213 of 747: liblapack3:riscv64=3.12.1-7+b1 Downloading dependency 214 of 747: libpython3-dev:riscv64=3.13.9-3 Downloading dependency 215 of 747: xtrans-dev:riscv64=1.6.0-1 Downloading dependency 216 of 747: libdbus-1-3:riscv64=1.16.2-3 Downloading dependency 217 of 747: libnghttp2-14:riscv64=1.68.0-1 Downloading dependency 218 of 747: libtirpc3t64:riscv64=1.3.6+ds-1 Downloading dependency 219 of 747: readline-common:riscv64=8.3-4 Downloading dependency 220 of 747: libfeature-compat-class-perl:riscv64=0.08-1 Downloading dependency 221 of 747: libtext-unidecode-perl:riscv64=1.30-3 Downloading dependency 222 of 747: libxml2-16:riscv64=2.15.1+dfsg-2+b1 Downloading dependency 223 of 747: libpam0g:riscv64=1.7.0-5+b1 Downloading dependency 224 of 747: libsort-versions-perl:riscv64=1.62-3 Downloading dependency 225 of 747: libmtdev1t64:riscv64=1.1.7-1+b1 Downloading dependency 226 of 747: libtext-levenshteinxs-perl:riscv64=0.03-5+b3 Downloading dependency 227 of 747: libqt6widgets6:riscv64=6.9.2+dfsg-4 Downloading dependency 228 of 747: libhtml-form-perl:riscv64=6.13-1 Downloading dependency 229 of 747: libsereal-decoder-perl:riscv64=5.004+ds-1+b4 Downloading dependency 230 of 747: libpython3.13-dev:riscv64=3.13.12-1 Downloading dependency 231 of 747: appstream:riscv64=1.1.2-1 Downloading dependency 232 of 747: libdouble-conversion3:riscv64=3.4.0-1 Downloading dependency 233 of 747: libxcb-util1:riscv64=0.4.1-1+b1 Downloading dependency 234 of 747: libstring-copyright-perl:riscv64=0.003014-1 Downloading dependency 235 of 747: libperl5.40:riscv64=5.40.1-7 Downloading dependency 236 of 747: libc6-dev:riscv64=2.42-13 Downloading dependency 237 of 747: libio-string-perl:riscv64=1.08-4 Downloading dependency 238 of 747: diffstat:riscv64=1.68-1 Downloading dependency 239 of 747: libgcc-s1:riscv64=15.2.0-13 Downloading dependency 240 of 747: libgnutls-openssl27t64:riscv64=3.8.12-2 Downloading dependency 241 of 747: libqt6opengl6:riscv64=6.9.2+dfsg-4 Downloading dependency 242 of 747: libtoml-tiny-perl:riscv64=0.20-1 Downloading dependency 243 of 747: libxfixes3:riscv64=1:6.0.0-2+b5 Downloading dependency 244 of 747: libhogweed6t64:riscv64=3.10.2-1Get:1 http://deb.debian.org/debian unstable/main riscv64 libhogweed6t64 riscv64 3.10.2-1 [336 kB] Fetched 336 kB in 0s (4623 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9b5z5004/libhogweed6t64_3.10.2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 procps riscv64 2:4.0.4-9+b1 [879 kB] Fetched 879 kB in 0s (8550 kB/s) dpkg-name: info: moved 'procps_2%3a4.0.4-9+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp9gl2_v7u/procps_4.0.4-9+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libbsd0 riscv64 0.12.2-2+b1 [132 kB] Fetched 132 kB in 0s (2152 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq2x9v8sn/libbsd0_0.12.2-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libjansson4 riscv64 2.14-2+b4 [40.1 kB] Fetched 40.1 kB in 0s (695 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvinfiuuy/libjansson4_2.14-2+b4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libcap-ng0 riscv64 0.8.5-4+b2 [17.1 kB] Fetched 17.1 kB in 0s (312 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpguz8kqph/libcap-ng0_0.8.5-4+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgssrpc4t64 riscv64 1.22.1-2 [60.8 kB] Fetched 60.8 kB in 0s (1045 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdt4805kb/libgssrpc4t64_1.22.1-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libice6 riscv64 2:1.1.1-1+b1 [65.5 kB] Fetched 65.5 kB in 0s (1130 kB/s) dpkg-name: info: moved 'libice6_2%3a1.1.1-1+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpn759aw50/libice6_1.1.1-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtiff6 riscv64 4.7.1-1 [354 kB] Fetched 354 kB in 0s (4572 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgqgijyhi/libtiff6_4.7.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 graphviz riscv64 14.1.2-1 [60.3 kB] Fetched 60.3 kB in 0s (1037 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxmquah11/graphviz_14.1.2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblzma5 riscv64 5.8.2-2 [329 kB] Fetched 329 kB in 0s (4347 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsuuq5wb7/liblzma5_5.8.2-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 xz-utils riscv64 5.8.2-2 [705 kB] Fetched 705 kB in 0s (7523 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuz1y3kop/xz-utils_5.8.2-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 ca-certificates all 20250419 [162 kB] Fetched 162 kB in 0s (2581 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqkxiouem/ca-certificates_20250419_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Fetched 17.8 kB in 0s (289 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy3y_plev/libnamespace-clean-perl_0.27-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libreadline-dev riscv64 8.3-4 [407 kB] Fetched 407 kB in 0s (5045 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgh6nqma1/libreadline-dev_8.3-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libb-hooks-endofscope-perl all 0.28-2 [17.6 kB] Fetched 17.6 kB in 0s (309 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8btdllpl/libb-hooks-endofscope-perl_0.28-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libbrotli-dev riscv64 1.2.0-3 [949 kB] Fetched 949 kB in 0s (9062 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz8hys9gy/libbrotli-dev_1.2.0-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdevel-size-perl riscv64 0.86-1 [24.2 kB] Fetched 24.2 kB in 0s (435 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7o69q9c6/libdevel-size-perl_0.86-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libblkid1 riscv64 2.41.3-3 [194 kB] Fetched 194 kB in 0s (2970 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw1scgawp/libblkid1_2.41.3-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libapt-pkg-perl riscv64 0.1.43 [66.8 kB] Fetched 66.8 kB in 0s (1156 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0156m2ff/libapt-pkg-perl_0.1.43_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libb-keywords-perl all 1.29-1 [12.5 kB] Fetched 12.5 kB in 0s (232 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprfx2g9ta/libb-keywords-perl_1.29-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 octave riscv64 10.3.0-3 [9360 kB] Fetched 9360 kB in 1s (16.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpch99zkz6/octave_10.3.0-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpng-dev riscv64 1.6.55-1 [545 kB] Fetched 545 kB in 0s (6244 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc19yoa_i/libpng-dev_1.6.55-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtext-wrapi18n-perl all 0.06-10 [8808 B] Fetched 8808 B in 0s (159 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9sxo6kis/libtext-wrapi18n-perl_0.06-10_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblcms2-2 riscv64 2.17-1 [170 kB] Fetched 170 kB in 0s (2558 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqkt6xsk4/liblcms2-2_2.17-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxdmcp-dev riscv64 1:1.1.5-2 [54.4 kB] Fetched 54.4 kB in 0s (931 kB/s) dpkg-name: info: moved 'libxdmcp-dev_1%3a1.1.5-2_riscv64.deb' to '/srv/rebuilderd/tmp/tmpk3yhhzkh/libxdmcp-dev_1.1.5-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libvulkan1 riscv64 1.4.341.0-1 [140 kB] Fetched 140 kB in 0s (2242 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpplo_wy44/libvulkan1_1.4.341.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 lzop riscv64 1.04-2+b1 [83.9 kB] Fetched 83.9 kB in 0s (1400 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzsh641ph/lzop_1.04-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmpfr6 riscv64 4.2.2-2+b1 [667 kB] Fetched 667 kB in 0s (7342 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpumw_qffv/libmpfr6_4.2.2-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-xfixes0 riscv64 1.17.0-2+b2 [109 kB] Fetched 109 kB in 0s (1711 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5xzbrkvm/libxcb-xfixes0_1.17.0-2+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libparams-validate-perl riscv64 1.31-2+b4 [63.5 kB] Fetched 63.5 kB in 0s (1101 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp89cei7q9/libparams-validate-perl_1.31-2+b4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3.13 riscv64 3.13.12-1 [2175 kB] Fetched 2175 kB in 0s (12.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0c45scle/libpython3.13_3.13.12-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-present0 riscv64 1.17.0-2+b2 [105 kB] Fetched 105 kB in 0s (1729 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp27ekvky9/libxcb-present0_1.17.0-2+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libaudit1 riscv64 1:4.1.2-1+b1 [58.7 kB] Fetched 58.7 kB in 0s (1011 kB/s) dpkg-name: info: moved 'libaudit1_1%3a4.1.2-1+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp0ydv8k97/libaudit1_4.1.2-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libgcrypt20 riscv64 1.11.2-3+b1 [867 kB] Fetched 867 kB in 0s (8469 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr747fh4t/libgcrypt20_1.11.2-3+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxdmcp6 riscv64 1:1.1.5-2 [28.2 kB] Fetched 28.2 kB in 0s (495 kB/s) dpkg-name: info: moved 'libxdmcp6_1%3a1.1.5-2_riscv64.deb' to '/srv/rebuilderd/tmp/tmpl99f0zhh/libxdmcp6_1.1.5-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpcre2-16-0 riscv64 10.46-1+b1 [276 kB] Fetched 276 kB in 0s (4001 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl9zseeeb/libpcre2-16-0_10.46-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfftw3-single3 riscv64 3.3.10-2+b2 [379 kB] Fetched 379 kB in 0s (5031 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph3gdsxtc/libfftw3-single3_3.3.10-2+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 autoconf all 2.72-3.1 [494 kB] Fetched 494 kB in 0s (5719 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7nwabvsn/autoconf_2.72-3.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdatrie1 riscv64 0.2.14-1 [39.7 kB] Fetched 39.7 kB in 0s (697 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi8oonn89/libdatrie1_0.2.14-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Fetched 19.9 kB in 0s (355 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptbufqa85/libfile-stripnondeterminism-perl_1.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 perltidy all 20250105-1 [706 kB] Fetched 706 kB in 0s (7494 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwgay87wn/perltidy_20250105-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3.13-dev riscv64 3.13.12-1 [512 kB] Fetched 512 kB in 0s (6145 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwnwud1ik/python3.13-dev_3.13.12-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmagic-mgc riscv64 1:5.46-5+b1 [338 kB] Fetched 338 kB in 0s (4586 kB/s) dpkg-name: info: moved 'libmagic-mgc_1%3a5.46-5+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpc6rtki_r/libmagic-mgc_5.46-5+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 r-base-dev all 4.5.2-1 [2040 B] Fetched 2040 B in 0s (34.8 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdtydqtmx/r-base-dev_4.5.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsub-quote-perl all 2.006009-1 [21.3 kB] Fetched 21.3 kB in 0s (377 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvbsj2f8s/libsub-quote-perl_2.006009-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libavahi-client3 riscv64 0.8-18 [48.4 kB] Fetched 48.4 kB in 0s (866 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfs4uegg0/libavahi-client3_0.8-18_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libgcc-15-dev riscv64 15.2.0-13 [5696 kB] Fetched 5696 kB in 0s (15.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6hdarlro/libgcc-15-dev_15.2.0-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgdbm6t64 riscv64 1.26-1+b1 [79.2 kB] Fetched 79.2 kB in 0s (1299 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxfvthy9z/libgdbm6t64_1.26-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libitm1 riscv64 15.2.0-13 [25.5 kB] Fetched 25.5 kB in 0s (450 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptwbfpdi_/libitm1_15.2.0-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmd4c0 riscv64 0.5.2-2+b2 [49.3 kB] Fetched 49.3 kB in 0s (838 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk0q73gxx/libmd4c0_0.5.2-2+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libqt6printsupport6 riscv64 6.9.2+dfsg-4 [221 kB] Fetched 221 kB in 0s (3284 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8bzqsujp/libqt6printsupport6_6.9.2+dfsg-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 rdfind riscv64 1.6.0-1+b2 [41.9 kB] Fetched 41.9 kB in 0s (732 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxr7eq086/rdfind_1.6.0-1+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtasn1-6-dev riscv64 4.21.0-2 [161 kB] Fetched 161 kB in 0s (2491 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsswb45fa/libtasn1-6-dev_4.21.0-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libproc-processtable-perl riscv64 0.637-1+b1 [41.6 kB] Fetched 41.6 kB in 0s (705 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl33rbfgd/libproc-processtable-perl_0.637-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libtsan2 riscv64 15.2.0-13 [2654 kB] Fetched 2654 kB in 0s (13.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8tl_d37m/libtsan2_15.2.0-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgudev-1.0-0 riscv64 238-7+b1 [14.7 kB] Fetched 14.7 kB in 0s (268 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb6ycia80/libgudev-1.0-0_238-7+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblist-moreutils-xs-perl riscv64 0.430-4+b2 [42.8 kB] Fetched 42.8 kB in 0s (749 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr92v1f3y/liblist-moreutils-xs-perl_0.430-4+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtext-reform-perl all 1.20-5 [36.0 kB] Fetched 36.0 kB in 0s (633 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf1c8q6fn/libtext-reform-perl_1.20-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libindirect-perl riscv64 0.39-2+b3 [27.1 kB] Fetched 27.1 kB in 0s (487 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcfs4j0e6/libindirect-perl_0.39-2+b3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3 riscv64 3.13.9-3 [27.6 kB] Fetched 27.6 kB in 0s (503 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgrwff5un/python3_3.13.9-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libaec-dev riscv64 1.1.5-1 [51.2 kB] Fetched 51.2 kB in 0s (904 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwd99u9ac/libaec-dev_1.1.5-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libclass-load-perl all 0.25-2 [15.3 kB] Fetched 15.3 kB in 0s (278 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2a08q2hy/libclass-load-perl_0.25-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libobject-pad-perl riscv64 0.823-2 [142 kB] Fetched 142 kB in 0s (2295 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwd5s56bv/libobject-pad-perl_0.823-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdata-optlist-perl all 0.114-1 [10.6 kB] Fetched 10.6 kB in 0s (193 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptp_omqgm/libdata-optlist-perl_0.114-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Fetched 8812 B in 0s (163 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3cadheoh/dh-strip-nondeterminism_1.15.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 cpp-15-riscv64-linux-gnu riscv64 15.2.0-13 [14.7 MB] Fetched 14.7 MB in 1s (17.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjr0_0p0b/cpp-15-riscv64-linux-gnu_15.2.0-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpaper-utils riscv64 2.2.5-0.3+b3 [15.9 kB] Fetched 15.9 kB in 0s (284 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjpzok_uu/libpaper-utils_2.2.5-0.3+b3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libaliased-perl all 0.34-3 [13.5 kB] Fetched 13.5 kB in 0s (243 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdb1c1ifo/libaliased-perl_0.34-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Fetched 22.1 kB in 0s (398 kB/s) dpkg-name: info: moved 'xorg-sgml-doctools_1%3a1.11-1.1_all.deb' to '/srv/rebuilderd/tmp/tmpc6gpviwb/xorg-sgml-doctools_1.11-1.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtry-tiny-perl all 0.32-1 [22.9 kB] Fetched 22.9 kB in 0s (393 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8tq2q_2g/libtry-tiny-perl_0.32-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 openssl-provider-legacy riscv64 3.5.5-1 [313 kB] Fetched 313 kB in 0s (4365 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsr0b599s/openssl-provider-legacy_3.5.5-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libparse-recdescent-perl all 1.967015+dfsg-4 [147 kB] Fetched 147 kB in 0s (2356 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuzbgb45d/libparse-recdescent-perl_1.967015+dfsg-4_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libssh2-1-dev riscv64 1.11.1-1+b1 [593 kB] Fetched 593 kB in 0s (6880 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpod34p_qs/libssh2-1-dev_1.11.1-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsharpyuv0 riscv64 1.5.0-0.1+b1 [114 kB] Fetched 114 kB in 0s (1875 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpphl6blg5/libsharpyuv0_1.5.0-0.1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libconfig-model-backend-yaml-perl all 2.134-2 [10.8 kB] Fetched 10.8 kB in 0s (184 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyh8s8g9v/libconfig-model-backend-yaml-perl_2.134-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsensors-config all 1:3.6.2-2 [16.2 kB] Fetched 16.2 kB in 0s (291 kB/s) dpkg-name: info: moved 'libsensors-config_1%3a3.6.2-2_all.deb' to '/srv/rebuilderd/tmp/tmp9txhk0u2/libsensors-config_3.6.2-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-xinput0 riscv64 1.17.0-2+b2 [130 kB] Fetched 130 kB in 0s (2077 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpua1pma9p/libxcb-xinput0_1.17.0-2+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libjs-jquery-ui-theme-base all 1.14.1+dfsg-1 [44.7 kB] Fetched 44.7 kB in 0s (764 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvt79pw_7/libjs-jquery-ui-theme-base_1.14.1+dfsg-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Fetched 39.1 kB in 0s (681 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpok6wu4wu/libhtml-tokeparser-simple-perl_3.16-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libflac14 riscv64 1.5.0+ds-5 [162 kB] Fetched 162 kB in 0s (2513 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnokuwboh/libflac14_1.5.0+ds-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 make riscv64 4.4.1-3 [463 kB] Fetched 463 kB in 0s (5629 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf78xprvh/make_4.4.1-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcarp-assert-more-perl all 2.9.0-1 [21.9 kB] Fetched 21.9 kB in 0s (395 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps_arin1b/libcarp-assert-more-perl_2.9.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 xauth riscv64 1:1.1.2-1.1 [35.8 kB] Fetched 35.8 kB in 0s (641 kB/s) dpkg-name: info: moved 'xauth_1%3a1.1.2-1.1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp7uvn72iz/xauth_1.1.2-1.1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 gzip riscv64 1.13-1 [139 kB] Fetched 139 kB in 0s (2219 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplkhfdq51/gzip_1.13-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsubunit0 riscv64 1.4.4+1-1 [6244 B] Fetched 6244 B in 0s (117 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj4v_08uw/libsubunit0_1.4.4+1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libunistring5 riscv64 1.3-2+b1 [471 kB] Fetched 471 kB in 0s (5944 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdwrpcnl5/libunistring5_1.3-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libspdlog1.15 riscv64 1:1.15.3+ds-1+b1 [112 kB] Fetched 112 kB in 0s (1831 kB/s) dpkg-name: info: moved 'libspdlog1.15_1%3a1.15.3+ds-1+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpx7ubb29f/libspdlog1.15_1.15.3+ds-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfmt10 riscv64 10.1.1+ds1-4+b1 [128 kB] Fetched 128 kB in 0s (2087 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvr4mvva1/libfmt10_10.1.1+ds1-4+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libuchardet0 riscv64 0.0.8-2+b1 [68.9 kB] Fetched 68.9 kB in 0s (1179 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmonx2w0b/libuchardet0_0.0.8-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 plzip riscv64 1.13~rc1-3 [63.9 kB] Fetched 63.9 kB in 0s (1123 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppkmjljht/plzip_1.13~rc1-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsasl2-modules-db riscv64 2.1.28+dfsg1-10 [20.2 kB] Fetched 20.2 kB in 0s (364 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz6mmvxi0/libsasl2-modules-db_2.1.28+dfsg1-10_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libclang1-21 riscv64 1:21.1.8-3 [7595 kB] Fetched 7595 kB in 0s (16.1 MB/s) dpkg-name: info: moved 'libclang1-21_1%3a21.1.8-3_riscv64.deb' to '/srv/rebuilderd/tmp/tmpier764_r/libclang1-21_21.1.8-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libbz2-1.0 riscv64 1.0.8-6+b1 [40.1 kB] Fetched 40.1 kB in 0s (676 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpchpahkej/libbz2-1.0_1.0.8-6+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libdpkg-perl all 1.23.5 [668 kB] Fetched 668 kB in 0s (7233 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn74j093_/libdpkg-perl_1.23.5_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libexporter-lite-perl all 0.09-2 [10.7 kB] Fetched 10.7 kB in 0s (175 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbmiynp70/libexporter-lite-perl_0.09-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libclone-choose-perl all 0.010-2 [8676 B] Fetched 8676 B in 0s (159 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw8qbjih4/libclone-choose-perl_0.010-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Fetched 12.9 kB in 0s (241 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprfuq0qeb/libwww-robotrules-perl_6.02-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 grep riscv64 3.12-1 [442 kB] Fetched 442 kB in 0s (5675 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2s2rbwso/grep_3.12-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgmp10 riscv64 2:6.3.0+dfsg-5+b1 [563 kB] Fetched 563 kB in 0s (6691 kB/s) dpkg-name: info: moved 'libgmp10_2%3a6.3.0+dfsg-5+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp7qluex9e/libgmp10_6.3.0+dfsg-5+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Fetched 13.1 kB in 0s (204 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1ke7lbe6/libhttp-negotiate-perl_6.01-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libportaudio2 riscv64 19.7.0-1 [62.7 kB] Fetched 62.7 kB in 0s (980 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp13pg95bo/libportaudio2_19.7.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhttp-date-perl all 6.06-1 [10.7 kB] Fetched 10.7 kB in 0s (191 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsmz7kcn5/libhttp-date-perl_6.06-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblapack-dev riscv64 3.12.1-7+b1 [12.0 MB] Fetched 12.0 MB in 1s (16.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaghlhjvw/liblapack-dev_3.12.1-7+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libabsl20240722 riscv64 20240722.0-4 [494 kB] Fetched 494 kB in 0s (5615 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5o6pd8t3/libabsl20240722_20240722.0-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libglpk40 riscv64 5.0-2+b1 [376 kB] Fetched 376 kB in 0s (4918 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbtjq1ums/libglpk40_5.0-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 build-essential riscv64 12.12 [4628 B] Fetched 4628 B in 0s (83.3 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpydkx6mp6/build-essential_12.12_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libinput10 riscv64 1.31.0-1 [158 kB] Fetched 158 kB in 0s (2496 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqzjij02s/libinput10_1.31.0-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 ucf all 3.0052 [43.3 kB] Fetched 43.3 kB in 0s (767 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp2a9xkbz/ucf_3.0052_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libunbound8 riscv64 1.24.2-1 [617 kB] Fetched 617 kB in 0s (7013 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuecyqdeq/libunbound8_1.24.2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Fetched 22.9 kB in 0s (418 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4byomogo/intltool-debian_0.35.0+20060710.6_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxt6t64 riscv64 1:1.2.1-1.3+b1 [184 kB] Fetched 184 kB in 0s (2854 kB/s) dpkg-name: info: moved 'libxt6t64_1%3a1.2.1-1.3+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpuf5wihj2/libxt6t64_1.2.1-1.3+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dh-octave all 1.14.1 [25.8 kB] Fetched 25.8 kB in 0s (448 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkfffm93q/dh-octave_1.14.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmp3lame0 riscv64 3.101~svn6525+dfsg-2 [285 kB] Fetched 285 kB in 0s (4041 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr0o6bv7m/libmp3lame0_3.101~svn6525+dfsg-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmoo-perl all 2.005005-1 [58.0 kB] Fetched 58.0 kB in 0s (1004 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpydkcn4o5/libmoo-perl_2.005005-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libmpg123-0t64 riscv64 1.33.3-2 [156 kB] Fetched 156 kB in 0s (2465 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9fvxn2hg/libmpg123-0t64_1.33.3-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libarpack2t64 riscv64 3.9.1-6+b1 [94.2 kB] Fetched 94.2 kB in 0s (1555 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp99a7zatd/libarpack2t64_3.9.1-6+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpango-1.0-0 riscv64 1.57.0-1 [227 kB] Fetched 227 kB in 0s (3414 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7d7l5qkz/libpango-1.0-0_1.57.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 sysvinit-utils riscv64 3.15-6 [34.6 kB] Fetched 34.6 kB in 0s (629 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_fhcc1fp/sysvinit-utils_3.15-6_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libqrupdate1 riscv64 1.1.5-3 [33.3 kB] Fetched 33.3 kB in 0s (599 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphr4pebo6/libqrupdate1_1.1.5-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libyaml-0-2 riscv64 0.2.5-2+b1 [56.2 kB] Fetched 56.2 kB in 0s (981 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0l3o07ru/libyaml-0-2_0.2.5-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libldap-dev riscv64 2.6.10+dfsg-1+b1 [635 kB] Fetched 635 kB in 0s (7226 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfwzn0y60/libldap-dev_2.6.10+dfsg-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmailtools-perl all 2.22-1 [88.8 kB] Fetched 88.8 kB in 0s (1478 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7hzxnkmq/libmailtools-perl_2.22-1_all.deb' Downloading dependency 245 of 747: procps:riscv64=2:4.0.4-9+b1 Downloading dependency 246 of 747: libbsd0:riscv64=0.12.2-2+b1 Downloading dependency 247 of 747: libjansson4:riscv64=2.14-2+b4 Downloading dependency 248 of 747: libcap-ng0:riscv64=0.8.5-4+b2 Downloading dependency 249 of 747: libgssrpc4t64:riscv64=1.22.1-2 Downloading dependency 250 of 747: libice6:riscv64=2:1.1.1-1+b1 Downloading dependency 251 of 747: libtiff6:riscv64=4.7.1-1 Downloading dependency 252 of 747: graphviz:riscv64=14.1.2-1 Downloading dependency 253 of 747: liblzma5:riscv64=5.8.2-2 Downloading dependency 254 of 747: xz-utils:riscv64=5.8.2-2 Downloading dependency 255 of 747: ca-certificates:riscv64=20250419 Downloading dependency 256 of 747: libnamespace-clean-perl:riscv64=0.27-2 Downloading dependency 257 of 747: libreadline-dev:riscv64=8.3-4 Downloading dependency 258 of 747: libb-hooks-endofscope-perl:riscv64=0.28-2 Downloading dependency 259 of 747: libbrotli-dev:riscv64=1.2.0-3 Downloading dependency 260 of 747: libdevel-size-perl:riscv64=0.86-1 Downloading dependency 261 of 747: libblkid1:riscv64=2.41.3-3 Downloading dependency 262 of 747: libapt-pkg-perl:riscv64=0.1.43 Downloading dependency 263 of 747: libb-keywords-perl:riscv64=1.29-1 Downloading dependency 264 of 747: octave:riscv64=10.3.0-3 Downloading dependency 265 of 747: libpng-dev:riscv64=1.6.55-1 Downloading dependency 266 of 747: libtext-wrapi18n-perl:riscv64=0.06-10 Downloading dependency 267 of 747: liblcms2-2:riscv64=2.17-1 Downloading dependency 268 of 747: libxdmcp-dev:riscv64=1:1.1.5-2 Downloading dependency 269 of 747: libvulkan1:riscv64=1.4.341.0-1 Downloading dependency 270 of 747: lzop:riscv64=1.04-2+b1 Downloading dependency 271 of 747: libmpfr6:riscv64=4.2.2-2+b1 Downloading dependency 272 of 747: libxcb-xfixes0:riscv64=1.17.0-2+b2 Downloading dependency 273 of 747: libparams-validate-perl:riscv64=1.31-2+b4 Downloading dependency 274 of 747: libpython3.13:riscv64=3.13.12-1 Downloading dependency 275 of 747: libxcb-present0:riscv64=1.17.0-2+b2 Downloading dependency 276 of 747: libaudit1:riscv64=1:4.1.2-1+b1 Downloading dependency 277 of 747: libgcrypt20:riscv64=1.11.2-3+b1 Downloading dependency 278 of 747: libxdmcp6:riscv64=1:1.1.5-2 Downloading dependency 279 of 747: libpcre2-16-0:riscv64=10.46-1+b1 Downloading dependency 280 of 747: libfftw3-single3:riscv64=3.3.10-2+b2 Downloading dependency 281 of 747: autoconf:riscv64=2.72-3.1 Downloading dependency 282 of 747: libdatrie1:riscv64=0.2.14-1 Downloading dependency 283 of 747: libfile-stripnondeterminism-perl:riscv64=1.15.0-1 Downloading dependency 284 of 747: perltidy:riscv64=20250105-1 Downloading dependency 285 of 747: python3.13-dev:riscv64=3.13.12-1 Downloading dependency 286 of 747: libmagic-mgc:riscv64=1:5.46-5+b1 Downloading dependency 287 of 747: r-base-dev:riscv64=4.5.2-1 Downloading dependency 288 of 747: libsub-quote-perl:riscv64=2.006009-1 Downloading dependency 289 of 747: libavahi-client3:riscv64=0.8-18 Downloading dependency 290 of 747: libgcc-15-dev:riscv64=15.2.0-13 Downloading dependency 291 of 747: libgdbm6t64:riscv64=1.26-1+b1 Downloading dependency 292 of 747: libitm1:riscv64=15.2.0-13 Downloading dependency 293 of 747: libmd4c0:riscv64=0.5.2-2+b2 Downloading dependency 294 of 747: libqt6printsupport6:riscv64=6.9.2+dfsg-4 Downloading dependency 295 of 747: rdfind:riscv64=1.6.0-1+b2 Downloading dependency 296 of 747: libtasn1-6-dev:riscv64=4.21.0-2 Downloading dependency 297 of 747: libproc-processtable-perl:riscv64=0.637-1+b1 Downloading dependency 298 of 747: libtsan2:riscv64=15.2.0-13 Downloading dependency 299 of 747: libgudev-1.0-0:riscv64=238-7+b1 Downloading dependency 300 of 747: liblist-moreutils-xs-perl:riscv64=0.430-4+b2 Downloading dependency 301 of 747: libtext-reform-perl:riscv64=1.20-5 Downloading dependency 302 of 747: libindirect-perl:riscv64=0.39-2+b3 Downloading dependency 303 of 747: python3:riscv64=3.13.9-3 Downloading dependency 304 of 747: libaec-dev:riscv64=1.1.5-1 Downloading dependency 305 of 747: libclass-load-perl:riscv64=0.25-2 Downloading dependency 306 of 747: libobject-pad-perl:riscv64=0.823-2 Downloading dependency 307 of 747: libdata-optlist-perl:riscv64=0.114-1 Downloading dependency 308 of 747: dh-strip-nondeterminism:riscv64=1.15.0-1 Downloading dependency 309 of 747: cpp-15-riscv64-linux-gnu:riscv64=15.2.0-13 Downloading dependency 310 of 747: libpaper-utils:riscv64=2.2.5-0.3+b3 Downloading dependency 311 of 747: libaliased-perl:riscv64=0.34-3 Downloading dependency 312 of 747: xorg-sgml-doctools:riscv64=1:1.11-1.1 Downloading dependency 313 of 747: libtry-tiny-perl:riscv64=0.32-1 Downloading dependency 314 of 747: openssl-provider-legacy:riscv64=3.5.5-1 Downloading dependency 315 of 747: libparse-recdescent-perl:riscv64=1.967015+dfsg-4 Downloading dependency 316 of 747: libssh2-1-dev:riscv64=1.11.1-1+b1 Downloading dependency 317 of 747: libsharpyuv0:riscv64=1.5.0-0.1+b1 Downloading dependency 318 of 747: libconfig-model-backend-yaml-perl:riscv64=2.134-2 Downloading dependency 319 of 747: libsensors-config:riscv64=1:3.6.2-2 Downloading dependency 320 of 747: libxcb-xinput0:riscv64=1.17.0-2+b2 Downloading dependency 321 of 747: libjs-jquery-ui-theme-base:riscv64=1.14.1+dfsg-1 Downloading dependency 322 of 747: libhtml-tokeparser-simple-perl:riscv64=3.16-4 Downloading dependency 323 of 747: libflac14:riscv64=1.5.0+ds-5 Downloading dependency 324 of 747: make:riscv64=4.4.1-3 Downloading dependency 325 of 747: libcarp-assert-more-perl:riscv64=2.9.0-1 Downloading dependency 326 of 747: xauth:riscv64=1:1.1.2-1.1 Downloading dependency 327 of 747: gzip:riscv64=1.13-1 Downloading dependency 328 of 747: libsubunit0:riscv64=1.4.4+1-1 Downloading dependency 329 of 747: libunistring5:riscv64=1.3-2+b1 Downloading dependency 330 of 747: libspdlog1.15:riscv64=1:1.15.3+ds-1+b1 Downloading dependency 331 of 747: libfmt10:riscv64=10.1.1+ds1-4+b1 Downloading dependency 332 of 747: libuchardet0:riscv64=0.0.8-2+b1 Downloading dependency 333 of 747: plzip:riscv64=1.13~rc1-3 Downloading dependency 334 of 747: libsasl2-modules-db:riscv64=2.1.28+dfsg1-10 Downloading dependency 335 of 747: libclang1-21:riscv64=1:21.1.8-3 Downloading dependency 336 of 747: libbz2-1.0:riscv64=1.0.8-6+b1 Downloading dependency 337 of 747: libdpkg-perl:riscv64=1.23.5 Downloading dependency 338 of 747: libexporter-lite-perl:riscv64=0.09-2 Downloading dependency 339 of 747: libclone-choose-perl:riscv64=0.010-2 Downloading dependency 340 of 747: libwww-robotrules-perl:riscv64=6.02-1 Downloading dependency 341 of 747: grep:riscv64=3.12-1 Downloading dependency 342 of 747: libgmp10:riscv64=2:6.3.0+dfsg-5+b1 Downloading dependency 343 of 747: libhttp-negotiate-perl:riscv64=6.01-2 Downloading dependency 344 of 747: libportaudio2:riscv64=19.7.0-1 Downloading dependency 345 of 747: libhttp-date-perl:riscv64=6.06-1 Downloading dependency 346 of 747: liblapack-dev:riscv64=3.12.1-7+b1 Downloading dependency 347 of 747: libabsl20240722:riscv64=20240722.0-4 Downloading dependency 348 of 747: libglpk40:riscv64=5.0-2+b1 Downloading dependency 349 of 747: build-essential:riscv64=12.12 Downloading dependency 350 of 747: libinput10:riscv64=1.31.0-1 Downloading dependency 351 of 747: ucf:riscv64=3.0052 Downloading dependency 352 of 747: libunbound8:riscv64=1.24.2-1 Downloading dependency 353 of 747: intltool-debian:riscv64=0.35.0+20060710.6 Downloading dependency 354 of 747: libxt6t64:riscv64=1:1.2.1-1.3+b1 Downloading dependency 355 of 747: dh-octave:riscv64=1.14.1 Downloading dependency 356 of 747: libmp3lame0:riscv64=3.101~svn6525+dfsg-2 Downloading dependency 357 of 747: libmoo-perl:riscv64=2.005005-1 Downloading dependency 358 of 747: libmpg123-0t64:riscv64=1.33.3-2 Downloading dependency 359 of 747: libarpack2t64:riscv64=3.9.1-6+b1 Downloading dependency 360 of 747: libpango-1.0-0:riscv64=1.57.0-1 Downloading dependency 361 of 747: sysvinit-utils:riscv64=3.15-6 Downloading dependency 362 of 747: libqrupdate1:riscv64=1.1.5-3 Downloading dependency 363 of 747: libyaml-0-2:riscv64=0.2.5-2+b1 Downloading dependency 364 of 747: libldap-dev:riscv64=2.6.10+dfsg-1+b1 Downloading dependency 365 of 747: libmailtools-perl:riscv64=2.22-1 Downloading dependency 366 of 747: libgd3:riscv64=2.3.3-13+b1Get:1 http://deb.debian.org/debian unstable/main riscv64 libgd3 riscv64 2.3.3-13+b1 [127 kB] Fetched 127 kB in 0s (2063 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfv67j5xr/libgd3_2.3.3-13+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libperlio-utf8-strict-perl riscv64 0.010-1+b3 [11.4 kB] Fetched 11.4 kB in 0s (204 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptsb5131q/libperlio-utf8-strict-perl_0.010-1+b3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpathplan4 riscv64 14.1.2-1 [28.7 kB] Fetched 28.7 kB in 0s (523 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp37787_ne/libpathplan4_14.1.2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libnettle8t64 riscv64 3.10.2-1 [332 kB] Fetched 332 kB in 0s (4603 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkkbam0ty/libnettle8t64_3.10.2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 fonts-freefont-otf all 20211204+svn4273-4 [4322 kB] Fetched 4322 kB in 0s (14.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqxi3ufow/fonts-freefont-otf_20211204+svn4273-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 bzip2 riscv64 1.0.8-6+b1 [40.8 kB] Fetched 40.8 kB in 0s (725 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbnv3crep/bzip2_1.0.8-6+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libts0t64 riscv64 1.22-1.1+b2 [62.0 kB] Fetched 62.0 kB in 0s (1071 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfo3a8lq3/libts0t64_1.22-1.1+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libblas3 riscv64 3.12.1-7+b1 [123 kB] Fetched 123 kB in 0s (2022 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjrqpmmn0/libblas3_3.12.1-7+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 patch riscv64 2.8-2 [134 kB] Fetched 134 kB in 0s (2148 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppt9wb576/patch_2.8-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdrm-common all 2.4.131-1 [9168 B] Fetched 9168 B in 0s (158 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzoaoq_cw/libdrm-common_2.4.131-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libstring-license-perl all 0.0.11-1 [34.7 kB] Fetched 34.7 kB in 0s (616 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv0f_qmud/libstring-license-perl_0.0.11-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libheif1 riscv64 1.21.2-2 [615 kB] Fetched 615 kB in 0s (6984 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbgyg0s_k/libheif1_1.21.2-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libgbm1 riscv64 26.0.0-1 [53.7 kB] Fetched 53.7 kB in 0s (927 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfy7_umoe/libgbm1_26.0.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfltk-gl1.3t64 riscv64 1.3.11-3 [62.5 kB] Fetched 62.5 kB in 0s (1075 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_lscgu1f/libfltk-gl1.3t64_1.3.11-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libfreetype6 riscv64 2.14.1+dfsg-2 [504 kB] Fetched 504 kB in 0s (5111 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi93t9yd4/libfreetype6_2.14.1+dfsg-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-shm0 riscv64 1.17.0-2+b2 [105 kB] Fetched 105 kB in 0s (1739 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpay69c_ni/libxcb-shm0_1.17.0-2+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 gnuplot-data all 6.0.3+dfsg1-1 [73.0 kB] Fetched 73.0 kB in 0s (1240 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp322nldlw/gnuplot-data_6.0.3+dfsg1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgraphite2-3 riscv64 1.3.14-11+b1 [79.4 kB] Fetched 79.4 kB in 0s (1359 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3md_p7gv/libgraphite2-3_1.3.14-11+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Fetched 10.8 kB in 0s (199 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdald_8mr/liblwp-protocol-https-perl_6.14-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libopengl0 riscv64 1.7.0-3 [41.0 kB] Fetched 41.0 kB in 0s (716 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvti0p8_q/libopengl0_1.7.0-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libkrb5support0 riscv64 1.22.1-2 [33.7 kB] Fetched 33.7 kB in 0s (598 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplldy99z2/libkrb5support0_1.22.1-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcrypt1 riscv64 1:4.5.1-1 [114 kB] Fetched 114 kB in 0s (1901 kB/s) dpkg-name: info: moved 'libcrypt1_1%3a4.5.1-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpfx46u5cy/libcrypt1_4.5.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 bash riscv64 5.3-2 [1561 kB] Fetched 1561 kB in 0s (11.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0xzoanuu/bash_5.3-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libbz2-dev riscv64 1.0.8-6+b1 [80.1 kB] Fetched 80.1 kB in 0s (1318 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5wbk253a/libbz2-dev_1.0.8-6+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libqt6core5compat6 riscv64 6.9.2-3 [142 kB] Fetched 142 kB in 0s (2246 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfgx1n77g/libqt6core5compat6_6.9.2-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libubsan1 riscv64 15.2.0-13 [1178 kB] Fetched 1178 kB in 0s (9943 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp08tfof9g/libubsan1_15.2.0-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libclass-xsaccessor-perl riscv64 1.19-4+b4 [36.6 kB] Fetched 36.6 kB in 0s (646 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn4vzkkw5/libclass-xsaccessor-perl_1.19-4+b4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libnspr4 riscv64 2:4.38.2-1 [110 kB] Fetched 110 kB in 0s (1826 kB/s) dpkg-name: info: moved 'libnspr4_2%3a4.38.2-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpax6lo2h7/libnspr4_4.38.2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libjbig0 riscv64 2.1-6.1+b3 [32.7 kB] Fetched 32.7 kB in 0s (587 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1m73f1af/libjbig0_2.1-6.1+b3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-cursor0 riscv64 0.1.6-1 [18.0 kB] Fetched 18.0 kB in 0s (319 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu54_be2w/libxcb-cursor0_0.1.6-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxkbcommon-x11-0 riscv64 1.13.1-1 [19.9 kB] Fetched 19.9 kB in 0s (363 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0g0nwf58/libxkbcommon-x11-0_1.13.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libncursesw6 riscv64 6.6+20251231-1 [141 kB] Fetched 141 kB in 0s (2162 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpny2r5o00/libncursesw6_6.6+20251231-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 gfortran riscv64 4:15.2.0-5 [1424 B] Fetched 1424 B in 0s (25.3 kB/s) dpkg-name: info: moved 'gfortran_4%3a15.2.0-5_riscv64.deb' to '/srv/rebuilderd/tmp/tmpslpxf0j8/gfortran_15.2.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 fontconfig-config riscv64 2.17.1-5 [56.0 kB] Fetched 56.0 kB in 0s (991 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcnkt6_e6/fontconfig-config_2.17.1-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 check riscv64 0.15.2-3 [149 kB] Fetched 149 kB in 0s (2388 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgft_c1on/check_0.15.2-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libregexp-pattern-license-perl all 3.11.2-1 [94.6 kB] Fetched 94.6 kB in 0s (1590 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp3hvclvz/libregexp-pattern-license-perl_3.11.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 iso-codes all 4.20.1-1 [3319 kB] Fetched 3319 kB in 0s (14.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmxol5pgx/iso-codes_4.20.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpixman-1-0 riscv64 0.46.4-1+b1 [179 kB] Fetched 179 kB in 0s (2608 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpza77rc0i/libpixman-1-0_0.46.4-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfont-ttf-perl all 1.06-2 [318 kB] Fetched 318 kB in 0s (4428 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3lhozc6u/libfont-ttf-perl_1.06-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsub-name-perl riscv64 0.28-1+b1 [12.4 kB] Fetched 12.4 kB in 0s (205 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp174s739b/libsub-name-perl_0.28-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libstring-escape-perl all 2010.002-3 [18.7 kB] Fetched 18.7 kB in 0s (344 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2gd9z2hp/libstring-escape-perl_2010.002-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxkbcommon0 riscv64 1.13.1-1 [144 kB] Fetched 144 kB in 0s (2265 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpol6s4hz2/libxkbcommon0_1.13.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libcc1-0 riscv64 15.2.0-13 [40.3 kB] Fetched 40.3 kB in 0s (717 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkkqmaq26/libcc1-0_15.2.0-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsub-identify-perl riscv64 0.14-4 [10.8 kB] Fetched 10.8 kB in 0s (199 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6_p4j7_t/libsub-identify-perl_0.14-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 tex-common all 6.20 [29.7 kB] Fetched 29.7 kB in 0s (536 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgt1wucat/tex-common_6.20_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmldbm-perl all 2.05-4 [16.8 kB] Fetched 16.8 kB in 0s (301 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph58_31rb/libmldbm-perl_2.05-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhtml-parser-perl riscv64 3.83-1+b3 [99.0 kB] Fetched 99.0 kB in 0s (1611 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcamizrjs/libhtml-parser-perl_3.83-1+b3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsub-install-perl all 0.929-1 [10.5 kB] Fetched 10.5 kB in 0s (187 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpllyrelim/libsub-install-perl_0.929-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 openjdk-21-doc all 21.0.10+7-1 [13.2 MB] Fetched 13.2 MB in 1s (16.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5n4_dnx3/openjdk-21-doc_21.0.10+7-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libqscintilla2-qt6-l10n all 2.14.1+dfsg-2 [105 kB] Fetched 105 kB in 0s (1688 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9mf90v05/libqscintilla2-qt6-l10n_2.14.1+dfsg-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libperl-dev riscv64 5.40.1-7 [3054 kB] Fetched 3054 kB in 0s (13.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp162r5l3k/libperl-dev_5.40.1-7_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libjpeg62-turbo-dev riscv64 1:2.1.5-4 [420 kB] Fetched 420 kB in 0s (5474 kB/s) dpkg-name: info: moved 'libjpeg62-turbo-dev_1%3a2.1.5-4_riscv64.deb' to '/srv/rebuilderd/tmp/tmp3eujzqo5/libjpeg62-turbo-dev_2.1.5-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libio-stringy-perl all 2.113-2 [48.3 kB] Fetched 48.3 kB in 0s (864 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_ptfdekk/libio-stringy-perl_2.113-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Fetched 7496 B in 0s (136 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzwnbs0t2/libsub-exporter-progressive-perl_0.001013-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 po-debconf all 1.0.22 [216 kB] Fetched 216 kB in 0s (3316 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0lvtxuky/po-debconf_1.0.22_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfile-which-perl all 1.27-2 [15.1 kB] Fetched 15.1 kB in 0s (272 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplc3js5qy/libfile-which-perl_1.27-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libkdb5-10t64 riscv64 1.22.1-2 [43.9 kB] Fetched 43.9 kB in 0s (749 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgxnbmuga/libkdb5-10t64_1.22.1-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libstrictures-perl all 2.000006-1 [18.6 kB] Fetched 18.6 kB in 0s (341 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq334n86z/libstrictures-perl_2.000006-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgmp-dev riscv64 2:6.3.0+dfsg-5+b1 [1103 kB] Fetched 1103 kB in 0s (9693 kB/s) dpkg-name: info: moved 'libgmp-dev_2%3a6.3.0+dfsg-5+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp_sg_bfja/libgmp-dev_6.3.0+dfsg-5+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libidn2-0 riscv64 2.3.8-4+b1 [110 kB] Fetched 110 kB in 0s (1676 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9ksmv4dx/libidn2-0_2.3.8-4+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 texinfo all 7.2-5 [1973 kB] Fetched 1973 kB in 0s (12.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg053w7o9/texinfo_7.2-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libio-interactive-perl all 1.027-1 [11.8 kB] Fetched 11.8 kB in 0s (213 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4x5zw6q3/libio-interactive-perl_1.027-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfltk1.3t64 riscv64 1.3.11-3 [551 kB] Fetched 551 kB in 0s (6564 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt_tp091c/libfltk1.3t64_1.3.11-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgl2ps1.4 riscv64 1.4.2+dfsg1-4 [42.8 kB] Fetched 42.8 kB in 0s (747 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9gytn8j7/libgl2ps1.4_1.4.2+dfsg1-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libwebp7 riscv64 1.5.0-0.1+b1 [284 kB] Fetched 284 kB in 0s (4056 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqfv4osak/libwebp7_1.5.0-0.1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtext-xslate-perl riscv64 3.5.9-2+b2 [174 kB] Fetched 174 kB in 0s (2696 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw_ohmkdr/libtext-xslate-perl_3.5.9-2+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libgnutls-dane0t64 riscv64 3.8.12-2 [473 kB] Fetched 473 kB in 0s (5946 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7bh214bt/libgnutls-dane0t64_3.8.12-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libclass-inspector-perl all 1.36-3 [17.5 kB] Fetched 17.5 kB in 0s (314 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb6uv2jp8/libclass-inspector-perl_1.36-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libsystemd0 riscv64 259.1-1 [481 kB] Fetched 481 kB in 0s (5981 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp51dt11rs/libsystemd0_259.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libglu1-mesa riscv64 9.0.2-1.1+b4 [181 kB] Fetched 181 kB in 0s (2747 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprfwga6v0/libglu1-mesa_9.0.2-1.1+b4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libx11-data all 2:1.8.12-1 [343 kB] Fetched 343 kB in 0s (4494 kB/s) dpkg-name: info: moved 'libx11-data_2%3a1.8.12-1_all.deb' to '/srv/rebuilderd/tmp/tmp9_d0bdly/libx11-data_1.8.12-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsensors5 riscv64 1:3.6.2-2+b1 [37.5 kB] Fetched 37.5 kB in 0s (669 kB/s) dpkg-name: info: moved 'libsensors5_1%3a3.6.2-2+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmph67l7kj5/libsensors5_3.6.2-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libthai-data all 0.1.30-1 [172 kB] Fetched 172 kB in 0s (2736 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9c8x4jbz/libthai-data_0.1.30-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libheif-plugin-dav1d riscv64 1.21.2-2 [19.4 kB] Fetched 19.4 kB in 0s (344 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxu_4irpj/libheif-plugin-dav1d_1.21.2-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 util-linux riscv64 2.41.3-3 [1159 kB] Fetched 1159 kB in 0s (9876 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp62rtse44/util-linux_2.41.3-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libllvm21 riscv64 1:21.1.8-3 [27.7 MB] Fetched 27.7 MB in 2s (17.9 MB/s) dpkg-name: info: moved 'libllvm21_1%3a21.1.8-3_riscv64.deb' to '/srv/rebuilderd/tmp/tmpa1uv02ww/libllvm21_21.1.8-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhtml-tree-perl all 5.07-3 [211 kB] Fetched 211 kB in 0s (3072 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2tnrw68i/libhtml-tree-perl_5.07-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 lintian all 2.129.0 [1068 kB] Fetched 1068 kB in 0s (9377 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt39a8p41/lintian_2.129.0_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libnghttp2-dev riscv64 1.68.0-1 [237 kB] Fetched 237 kB in 0s (3502 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2yct6hok/libnghttp2-dev_1.68.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblist-compare-perl all 0.55-2 [65.7 kB] Fetched 65.7 kB in 0s (1125 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbsc5yanl/liblist-compare-perl_0.55-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 debhelper all 13.30 [942 kB] Fetched 942 kB in 0s (9030 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptcn15hr9/debhelper_13.30_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpackage-stash-perl all 0.40-1 [22.0 kB] Fetched 22.0 kB in 0s (402 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgi2osb6i/libpackage-stash-perl_0.40-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libffi8 riscv64 3.5.2-3+b1 [22.3 kB] Fetched 22.3 kB in 0s (394 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvtrao8d8/libffi8_3.5.2-3+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 zlib1g-dev riscv64 1:1.3.dfsg+really1.3.1-3 [996 kB] Fetched 996 kB in 0s (9325 kB/s) dpkg-name: info: moved 'zlib1g-dev_1%3a1.3.dfsg+really1.3.1-3_riscv64.deb' to '/srv/rebuilderd/tmp/tmpsyuvn8_6/zlib1g-dev_1.3.dfsg+really1.3.1-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libacl1 riscv64 2.3.2-3 [32.7 kB] Fetched 32.7 kB in 0s (566 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoqtwi12s/libacl1_2.3.2-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libcom-err2 riscv64 1.47.2-3+b8 [24.7 kB] Fetched 24.7 kB in 0s (438 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm4f0piro/libcom-err2_1.47.2-3+b8_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libnetaddr-ip-perl riscv64 4.079+dfsg-2+b4 [98.3 kB] Fetched 98.3 kB in 0s (1622 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9mazeh91/libnetaddr-ip-perl_4.079+dfsg-2+b4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcrypt-dev riscv64 1:4.5.1-1 [262 kB] Fetched 262 kB in 0s (3813 kB/s) dpkg-name: info: moved 'libcrypt-dev_1%3a4.5.1-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpjtq03gjc/libcrypt-dev_4.5.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsyntax-keyword-try-perl riscv64 0.31-1 [27.3 kB] Fetched 27.3 kB in 0s (457 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx6zhr7pn/libsyntax-keyword-try-perl_0.31-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtirpc-dev riscv64 1.3.6+ds-1 [308 kB] Fetched 308 kB in 0s (3992 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1y0nrs69/libtirpc-dev_1.3.6+ds-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libio-socket-ssl-perl all 2.098-1 [229 kB] Fetched 229 kB in 0s (3301 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqlcldsl9/libio-socket-ssl-perl_2.098-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libavahi-common-data riscv64 0.8-18 [113 kB] Fetched 113 kB in 0s (1827 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqlf03i5k/libavahi-common-data_0.8-18_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libnghttp3-dev riscv64 1.12.0-1 [203 kB] Fetched 203 kB in 0s (3011 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoqf4jrad/libnghttp3-dev_1.12.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpaper2 riscv64 2.2.5-0.3+b3 [16.5 kB] Fetched 16.5 kB in 0s (302 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0o6fjjnl/libpaper2_2.2.5-0.3+b3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpcsclite1 riscv64 2.4.1-1 [56.3 kB] Fetched 56.3 kB in 0s (917 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfwk3abcj/libpcsclite1_2.4.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libedit2 riscv64 3.1-20251016-1 [92.5 kB] Fetched 92.5 kB in 0s (1582 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp18j6fyeh/libedit2_3.1-20251016-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 gfortran-15-riscv64-linux-gnu riscv64 15.2.0-13 [15.2 MB] Fetched 15.2 MB in 1s (17.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7fxft_6q/gfortran-15-riscv64-linux-gnu_15.2.0-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libio-tiecombine-perl all 1.005-3 [10.8 kB] Fetched 10.8 kB in 0s (197 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprx1dv12v/libio-tiecombine-perl_1.005-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libz3-4 riscv64 4.13.3-1+b1 [8610 kB] Fetched 8610 kB in 1s (16.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_6dwngwz/libz3-4_4.13.3-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmouse-perl riscv64 2.6.1-1 [143 kB] Fetched 143 kB in 0s (2280 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3_m1y92m/libmouse-perl_2.6.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libudev1 riscv64 259.1-1 [159 kB] Fetched 159 kB in 0s (2029 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphb6qgdm8/libudev1_259.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 g++-15-riscv64-linux-gnu riscv64 15.2.0-13 [15.8 MB] Fetched 15.8 MB in 1s (17.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp3wqjg1i/g++-15-riscv64-linux-gnu_15.2.0-13_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 binutils-common riscv64 2.46-1 [2632 kB] Fetched 2632 kB in 0s (13.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4aq1qu5e/binutils-common_2.46-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtext-glob-perl all 0.11-3 [7676 B] Fetched 7676 B in 0s (137 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj8odmt0l/libtext-glob-perl_0.11-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dh-octave-autopkgtest all 1.14.1 [11.8 kB] Fetched 11.8 kB in 0s (216 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpky0xebrt/dh-octave-autopkgtest_1.14.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtext-wrapper-perl all 1.05-4 [10.3 kB] Fetched 10.3 kB in 0s (187 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3i455eja/libtext-wrapper-perl_1.05-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 cpp-riscv64-linux-gnu riscv64 4:15.2.0-5 [5320 B] Fetched 5320 B in 0s (97.3 kB/s) dpkg-name: info: moved 'cpp-riscv64-linux-gnu_4%3a15.2.0-5_riscv64.deb' to '/srv/rebuilderd/tmp/tmpsx85zjkj/cpp-riscv64-linux-gnu_15.2.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libkeyutils1 riscv64 1.6.3-6+b1 [9672 B] Fetched 9672 B in 0s (174 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaurquaok/libkeyutils1_1.6.3-6+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libqt6sql6 riscv64 6.9.2+dfsg-4 [149 kB] Fetched 149 kB in 0s (2350 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprza995wh/libqt6sql6_6.9.2+dfsg-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpam-runtime all 1.7.0-5 [249 kB] Fetched 249 kB in 0s (3686 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpapxgmk25/libpam-runtime_1.7.0-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libasound2t64 riscv64 1.2.15.3-1 [390 kB] Fetched 390 kB in 0s (5168 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoubqlxza/libasound2t64_1.2.15.3-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpod-pom-perl all 2.01-4 [65.0 kB] Fetched 65.0 kB in 0s (1113 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgzfigh2l/libpod-pom-perl_2.01-4_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 binutils-riscv64-linux-gnu riscv64 2.46-1 [898 kB] Fetched 898 kB in 0s (8733 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfpj9257i/binutils-riscv64-linux-gnu_2.46-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtext-charwidth-perl riscv64 0.04-11+b5 [9416 B] Fetched 9416 B in 0s (173 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoytpdvfk/libtext-charwidth-perl_0.04-11+b5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdata-validate-uri-perl all 0.07-3 [11.0 kB] Fetched 11.0 kB in 0s (200 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxohp_vfo/libdata-validate-uri-perl_0.07-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libx11-xcb1 riscv64 2:1.8.12-1+b1 [247 kB] Fetched 247 kB in 0s (3630 kB/s) dpkg-name: info: moved 'libx11-xcb1_2%3a1.8.12-1+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmppbpxwv7o/libx11-xcb1_1.8.12-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpsl-dev riscv64 0.21.2-1.1+b2 [91.7 kB] Fetched 91.7 kB in 0s (1476 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp00qe_3ag/libpsl-dev_0.21.2-1.1+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libkadm5srv-mit12 riscv64 1.22.1-2 [55.8 kB] Fetched 55.8 kB in 0s (954 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz0mf623j/libkadm5srv-mit12_1.22.1-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libwayland-client0 riscv64 1.24.0-2+b2 [28.4 kB] Fetched 28.4 kB in 0s (509 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiidw8kor/libwayland-client0_1.24.0-2+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtime-moment-perl riscv64 0.46-1 [80.0 kB] Fetched 80.0 kB in 0s (1343 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp54f5lfag/libtime-moment-perl_0.46-1_riscv64.deb' Downloading dependency 367 of 747: libperlio-utf8-strict-perl:riscv64=0.010-1+b3 Downloading dependency 368 of 747: libpathplan4:riscv64=14.1.2-1 Downloading dependency 369 of 747: libnettle8t64:riscv64=3.10.2-1 Downloading dependency 370 of 747: fonts-freefont-otf:riscv64=20211204+svn4273-4 Downloading dependency 371 of 747: bzip2:riscv64=1.0.8-6+b1 Downloading dependency 372 of 747: libts0t64:riscv64=1.22-1.1+b2 Downloading dependency 373 of 747: libblas3:riscv64=3.12.1-7+b1 Downloading dependency 374 of 747: patch:riscv64=2.8-2 Downloading dependency 375 of 747: libdrm-common:riscv64=2.4.131-1 Downloading dependency 376 of 747: libstring-license-perl:riscv64=0.0.11-1 Downloading dependency 377 of 747: libheif1:riscv64=1.21.2-2 Downloading dependency 378 of 747: libgbm1:riscv64=26.0.0-1 Downloading dependency 379 of 747: libfltk-gl1.3t64:riscv64=1.3.11-3 Downloading dependency 380 of 747: libfreetype6:riscv64=2.14.1+dfsg-2 Downloading dependency 381 of 747: libxcb-shm0:riscv64=1.17.0-2+b2 Downloading dependency 382 of 747: gnuplot-data:riscv64=6.0.3+dfsg1-1 Downloading dependency 383 of 747: libgraphite2-3:riscv64=1.3.14-11+b1 Downloading dependency 384 of 747: liblwp-protocol-https-perl:riscv64=6.14-1 Downloading dependency 385 of 747: libopengl0:riscv64=1.7.0-3 Downloading dependency 386 of 747: libkrb5support0:riscv64=1.22.1-2 Downloading dependency 387 of 747: libcrypt1:riscv64=1:4.5.1-1 Downloading dependency 388 of 747: bash:riscv64=5.3-2 Downloading dependency 389 of 747: libbz2-dev:riscv64=1.0.8-6+b1 Downloading dependency 390 of 747: libqt6core5compat6:riscv64=6.9.2-3 Downloading dependency 391 of 747: libubsan1:riscv64=15.2.0-13 Downloading dependency 392 of 747: libclass-xsaccessor-perl:riscv64=1.19-4+b4 Downloading dependency 393 of 747: libnspr4:riscv64=2:4.38.2-1 Downloading dependency 394 of 747: libjbig0:riscv64=2.1-6.1+b3 Downloading dependency 395 of 747: libxcb-cursor0:riscv64=0.1.6-1 Downloading dependency 396 of 747: libxkbcommon-x11-0:riscv64=1.13.1-1 Downloading dependency 397 of 747: libncursesw6:riscv64=6.6+20251231-1 Downloading dependency 398 of 747: gfortran:riscv64=4:15.2.0-5 Downloading dependency 399 of 747: fontconfig-config:riscv64=2.17.1-5 Downloading dependency 400 of 747: check:riscv64=0.15.2-3 Downloading dependency 401 of 747: libregexp-pattern-license-perl:riscv64=3.11.2-1 Downloading dependency 402 of 747: iso-codes:riscv64=4.20.1-1 Downloading dependency 403 of 747: libpixman-1-0:riscv64=0.46.4-1+b1 Downloading dependency 404 of 747: libfont-ttf-perl:riscv64=1.06-2 Downloading dependency 405 of 747: libsub-name-perl:riscv64=0.28-1+b1 Downloading dependency 406 of 747: libstring-escape-perl:riscv64=2010.002-3 Downloading dependency 407 of 747: libxkbcommon0:riscv64=1.13.1-1 Downloading dependency 408 of 747: libcc1-0:riscv64=15.2.0-13 Downloading dependency 409 of 747: libsub-identify-perl:riscv64=0.14-4 Downloading dependency 410 of 747: tex-common:riscv64=6.20 Downloading dependency 411 of 747: libmldbm-perl:riscv64=2.05-4 Downloading dependency 412 of 747: libhtml-parser-perl:riscv64=3.83-1+b3 Downloading dependency 413 of 747: libsub-install-perl:riscv64=0.929-1 Downloading dependency 414 of 747: openjdk-21-doc:riscv64=21.0.10+7-1 Downloading dependency 415 of 747: libqscintilla2-qt6-l10n:riscv64=2.14.1+dfsg-2 Downloading dependency 416 of 747: libperl-dev:riscv64=5.40.1-7 Downloading dependency 417 of 747: libjpeg62-turbo-dev:riscv64=1:2.1.5-4 Downloading dependency 418 of 747: libio-stringy-perl:riscv64=2.113-2 Downloading dependency 419 of 747: libsub-exporter-progressive-perl:riscv64=0.001013-3 Downloading dependency 420 of 747: po-debconf:riscv64=1.0.22 Downloading dependency 421 of 747: libfile-which-perl:riscv64=1.27-2 Downloading dependency 422 of 747: libkdb5-10t64:riscv64=1.22.1-2 Downloading dependency 423 of 747: libstrictures-perl:riscv64=2.000006-1 Downloading dependency 424 of 747: libgmp-dev:riscv64=2:6.3.0+dfsg-5+b1 Downloading dependency 425 of 747: libidn2-0:riscv64=2.3.8-4+b1 Downloading dependency 426 of 747: texinfo:riscv64=7.2-5 Downloading dependency 427 of 747: libio-interactive-perl:riscv64=1.027-1 Downloading dependency 428 of 747: libfltk1.3t64:riscv64=1.3.11-3 Downloading dependency 429 of 747: libgl2ps1.4:riscv64=1.4.2+dfsg1-4 Downloading dependency 430 of 747: libwebp7:riscv64=1.5.0-0.1+b1 Downloading dependency 431 of 747: libtext-xslate-perl:riscv64=3.5.9-2+b2 Downloading dependency 432 of 747: libgnutls-dane0t64:riscv64=3.8.12-2 Downloading dependency 433 of 747: libclass-inspector-perl:riscv64=1.36-3 Downloading dependency 434 of 747: libsystemd0:riscv64=259.1-1 Downloading dependency 435 of 747: libglu1-mesa:riscv64=9.0.2-1.1+b4 Downloading dependency 436 of 747: libx11-data:riscv64=2:1.8.12-1 Downloading dependency 437 of 747: libsensors5:riscv64=1:3.6.2-2+b1 Downloading dependency 438 of 747: libthai-data:riscv64=0.1.30-1 Downloading dependency 439 of 747: libheif-plugin-dav1d:riscv64=1.21.2-2 Downloading dependency 440 of 747: util-linux:riscv64=2.41.3-3 Downloading dependency 441 of 747: libllvm21:riscv64=1:21.1.8-3 Downloading dependency 442 of 747: libhtml-tree-perl:riscv64=5.07-3 Downloading dependency 443 of 747: lintian:riscv64=2.129.0 Downloading dependency 444 of 747: libnghttp2-dev:riscv64=1.68.0-1 Downloading dependency 445 of 747: liblist-compare-perl:riscv64=0.55-2 Downloading dependency 446 of 747: debhelper:riscv64=13.30 Downloading dependency 447 of 747: libpackage-stash-perl:riscv64=0.40-1 Downloading dependency 448 of 747: libffi8:riscv64=3.5.2-3+b1 Downloading dependency 449 of 747: zlib1g-dev:riscv64=1:1.3.dfsg+really1.3.1-3 Downloading dependency 450 of 747: libacl1:riscv64=2.3.2-3 Downloading dependency 451 of 747: libcom-err2:riscv64=1.47.2-3+b8 Downloading dependency 452 of 747: libnetaddr-ip-perl:riscv64=4.079+dfsg-2+b4 Downloading dependency 453 of 747: libcrypt-dev:riscv64=1:4.5.1-1 Downloading dependency 454 of 747: libsyntax-keyword-try-perl:riscv64=0.31-1 Downloading dependency 455 of 747: libtirpc-dev:riscv64=1.3.6+ds-1 Downloading dependency 456 of 747: libio-socket-ssl-perl:riscv64=2.098-1 Downloading dependency 457 of 747: libavahi-common-data:riscv64=0.8-18 Downloading dependency 458 of 747: libnghttp3-dev:riscv64=1.12.0-1 Downloading dependency 459 of 747: libpaper2:riscv64=2.2.5-0.3+b3 Downloading dependency 460 of 747: libpcsclite1:riscv64=2.4.1-1 Downloading dependency 461 of 747: libedit2:riscv64=3.1-20251016-1 Downloading dependency 462 of 747: gfortran-15-riscv64-linux-gnu:riscv64=15.2.0-13 Downloading dependency 463 of 747: libio-tiecombine-perl:riscv64=1.005-3 Downloading dependency 464 of 747: libz3-4:riscv64=4.13.3-1+b1 Downloading dependency 465 of 747: libmouse-perl:riscv64=2.6.1-1 Downloading dependency 466 of 747: libudev1:riscv64=259.1-1 Downloading dependency 467 of 747: g++-15-riscv64-linux-gnu:riscv64=15.2.0-13 Downloading dependency 468 of 747: binutils-common:riscv64=2.46-1 Downloading dependency 469 of 747: libtext-glob-perl:riscv64=0.11-3 Downloading dependency 470 of 747: dh-octave-autopkgtest:riscv64=1.14.1 Downloading dependency 471 of 747: libtext-wrapper-perl:riscv64=1.05-4 Downloading dependency 472 of 747: cpp-riscv64-linux-gnu:riscv64=4:15.2.0-5 Downloading dependency 473 of 747: libkeyutils1:riscv64=1.6.3-6+b1 Downloading dependency 474 of 747: libqt6sql6:riscv64=6.9.2+dfsg-4 Downloading dependency 475 of 747: libpam-runtime:riscv64=1.7.0-5 Downloading dependency 476 of 747: libasound2t64:riscv64=1.2.15.3-1 Downloading dependency 477 of 747: libpod-pom-perl:riscv64=2.01-4 Downloading dependency 478 of 747: binutils-riscv64-linux-gnu:riscv64=2.46-1 Downloading dependency 479 of 747: libtext-charwidth-perl:riscv64=0.04-11+b5 Downloading dependency 480 of 747: libdata-validate-uri-perl:riscv64=0.07-3 Downloading dependency 481 of 747: libx11-xcb1:riscv64=2:1.8.12-1+b1 Downloading dependency 482 of 747: libpsl-dev:riscv64=0.21.2-1.1+b2 Downloading dependency 483 of 747: libkadm5srv-mit12:riscv64=1.22.1-2 Downloading dependency 484 of 747: libwayland-client0:riscv64=1.24.0-2+b2 Downloading dependency 485 of 747: libtime-moment-perl:riscv64=0.46-1 Downloading dependency 486 of 747: libgl1-mesa-dri:riscv64=26.0.0-1Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libgl1-mesa-dri riscv64 26.0.0-1 [47.0 kB] Fetched 47.0 kB in 0s (818 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvtsskocq/libgl1-mesa-dri_26.0.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtext-autoformat-perl all 1.750000-2 [35.2 kB] Fetched 35.2 kB in 0s (567 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy9c7rwby/libtext-autoformat-perl_1.750000-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 debconf all 1.5.92 [123 kB] Fetched 123 kB in 0s (1719 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptl761zmv/debconf_1.5.92_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsvtav1enc2 riscv64 2.3.0+dfsg-1 [1119 kB] Fetched 1119 kB in 0s (8734 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3xw_a03f/libsvtav1enc2_2.3.0+dfsg-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhdf5-310 riscv64 1.14.6+repack-2 [1388 kB] Fetched 1388 kB in 0s (10.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp97mtrfad/libhdf5-310_1.14.6+repack-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 gfortran-riscv64-linux-gnu riscv64 4:15.2.0-5 [1284 B] Fetched 1284 B in 0s (23.7 kB/s) dpkg-name: info: moved 'gfortran-riscv64-linux-gnu_4%3a15.2.0-5_riscv64.deb' to '/srv/rebuilderd/tmp/tmpkk42rdhz/gfortran-riscv64-linux-gnu_15.2.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libwacom9 riscv64 2.18.0-1 [25.9 kB] Fetched 25.9 kB in 0s (408 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnzg86lkt/libwacom9_2.18.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libapt-pkg7.0 riscv64 3.1.16 [1173 kB] Fetched 1173 kB in 0s (9855 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd29vgugd/libapt-pkg7.0_3.1.16_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 init-system-helpers all 1.69 [39.3 kB] Fetched 39.3 kB in 0s (685 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpratdfmk0/init-system-helpers_1.69_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libopus0 riscv64 1.6.1-1 [3447 kB] Fetched 3447 kB in 0s (14.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6k1zklgd/libopus0_1.6.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 dh-python all 7.20260125 [119 kB] Fetched 119 kB in 0s (1920 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyobp32ws/dh-python_7.20260125_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmpc3 riscv64 1.3.1-2+b1 [56.8 kB] Fetched 56.8 kB in 0s (997 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkkl0klry/libmpc3_1.3.1-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libatomic1 riscv64 15.2.0-13 [8580 B] Fetched 8580 B in 0s (157 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphiv6xegr/libatomic1_15.2.0-13_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libglib2.0-0t64 riscv64 2.87.2-3 [1556 kB] Fetched 1556 kB in 0s (11.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplk4jf1sy/libglib2.0-0t64_2.87.2-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 liblz1 riscv64 1.16~rc1-3 [42.5 kB] Fetched 42.5 kB in 0s (752 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6g2rju7j/liblz1_1.16~rc1-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpangoft2-1.0-0 riscv64 1.57.0-1 [57.6 kB] Fetched 57.6 kB in 0s (1013 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjwepz2lq/libpangoft2-1.0-0_1.57.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libjpeg-dev riscv64 1:2.1.5-4 [72.2 kB] Fetched 72.2 kB in 0s (1259 kB/s) dpkg-name: info: moved 'libjpeg-dev_1%3a2.1.5-4_riscv64.deb' to '/srv/rebuilderd/tmp/tmpbufd50z4/libjpeg-dev_2.1.5-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 sed riscv64 4.9-2 [329 kB] Fetched 329 kB in 0s (4507 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpogkc1ilj/sed_4.9-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libblas-dev riscv64 3.12.1-7+b1 [291 kB] Fetched 291 kB in 0s (4111 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8zp0dgx2/libblas-dev_3.12.1-7+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhdf5-fortran-310 riscv64 1.14.6+repack-2 [110 kB] Fetched 110 kB in 0s (1835 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv1r8vhlp/libhdf5-fortran-310_1.14.6+repack-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmime-tools-perl all 5.517-1 [204 kB] Fetched 204 kB in 0s (3091 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa9sh58dm/libmime-tools-perl_5.517-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 findutils riscv64 4.10.0-3 [706 kB] Fetched 706 kB in 0s (7671 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprq88a_p4/findutils_4.10.0-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfile-listing-perl all 6.16-1 [12.4 kB] Fetched 12.4 kB in 0s (226 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfugvt749/libfile-listing-perl_6.16-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libgfortran-15-dev riscv64 15.2.0-13 [1311 kB] Fetched 1311 kB in 0s (9884 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr31jt_9r/libgfortran-15-dev_15.2.0-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfile-basedir-perl all 0.09-2 [15.1 kB] Fetched 15.1 kB in 0s (277 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6fvlt71t/libfile-basedir-perl_0.09-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 g++-15 riscv64 15.2.0-13 [26.0 kB] Fetched 26.0 kB in 0s (457 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyedf6q82/g++-15_15.2.0-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Fetched 14.0 kB in 0s (255 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_unhqsmb/libiterator-util-perl_0.02+ds1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsubunit-dev riscv64 1.4.4+1-1 [8748 B] Fetched 8748 B in 0s (162 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgur59equ/libsubunit-dev_1.4.4+1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libunicode-utf8-perl riscv64 0.63-1 [19.9 kB] Fetched 19.9 kB in 0s (362 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp002tfx39/libunicode-utf8-perl_0.63-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-render0 riscv64 1.17.0-2+b2 [115 kB] Fetched 115 kB in 0s (1847 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp64s68wei/libxcb-render0_1.17.0-2+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpng16-16t64 riscv64 1.6.55-1 [286 kB] Fetched 286 kB in 0s (4098 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi0_qlvhc/libpng16-16t64_1.6.55-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 gettext riscv64 0.23.2-1 [1684 kB] Fetched 1684 kB in 0s (11.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9bomomi4/gettext_0.23.2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libexporter-tiny-perl all 1.006003-1 [37.5 kB] Fetched 37.5 kB in 0s (658 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6guy30x9/libexporter-tiny-perl_1.006003-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcgraph8 riscv64 14.1.2-1 [57.2 kB] Fetched 57.2 kB in 0s (996 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe7k78u_j/libcgraph8_14.1.2-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 octave-common all 10.3.0-3 [6653 kB] Fetched 6653 kB in 0s (15.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp6y6qve2/octave-common_10.3.0-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 default-jdk-doc riscv64 2:1.21-76 [3264 B] Fetched 3264 B in 0s (59.7 kB/s) dpkg-name: info: moved 'default-jdk-doc_2%3a1.21-76_riscv64.deb' to '/srv/rebuilderd/tmp/tmpaexc75jj/default-jdk-doc_1.21-76_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 ca-certificates-java all 20240118 [11.6 kB] Fetched 11.6 kB in 0s (203 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpngyu9djp/ca-certificates-java_20240118_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 openjdk-21-jre-headless riscv64 21.0.10+7-1 [41.4 MB] Fetched 41.4 MB in 2s (17.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb_sa2zzy/openjdk-21-jre-headless_21.0.10+7-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3.13-minimal riscv64 3.13.12-1 [2172 kB] Fetched 2172 kB in 0s (12.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1wftzi3u/python3.13-minimal_3.13.12-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 librav1e0.8 riscv64 0.8.1-7 [655 kB] Fetched 655 kB in 0s (7129 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd6ywqh_3/librav1e0.8_0.8.1-7_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgraphicsmagick++-q16-12t64 riscv64 1.4+really1.3.46-2 [124 kB] Fetched 124 kB in 0s (1954 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmrdnvuvs/libgraphicsmagick++-q16-12t64_1.4+really1.3.46-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 zlib1g riscv64 1:1.3.dfsg+really1.3.1-3 [85.7 kB] Fetched 85.7 kB in 0s (1466 kB/s) dpkg-name: info: moved 'zlib1g_1%3a1.3.dfsg+really1.3.1-3_riscv64.deb' to '/srv/rebuilderd/tmp/tmp7v1zx0t_/zlib1g_1.3.dfsg+really1.3.1-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libproxy1v5 riscv64 0.5.12-1 [26.0 kB] Fetched 26.0 kB in 0s (472 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpob84cxao/libproxy1v5_0.5.12-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmousex-nativetraits-perl all 1.09-3 [53.5 kB] Fetched 53.5 kB in 0s (937 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgwnz21ch/libmousex-nativetraits-perl_1.09-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxau-dev riscv64 1:1.0.11-1+b1 [28.5 kB] Fetched 28.5 kB in 0s (509 kB/s) dpkg-name: info: moved 'libxau-dev_1%3a1.0.11-1+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmplro9cyzk/libxau-dev_1.0.11-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 cme all 1.044-2 [72.5 kB] Fetched 72.5 kB in 0s (1248 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr6nhursq/cme_1.044-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpcre2-32-0 riscv64 10.46-1+b1 [264 kB] Fetched 264 kB in 0s (3681 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphjh4tqf7/libpcre2-32-0_10.46-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-render-util0 riscv64 0.3.10-1+b1 [18.6 kB] Fetched 18.6 kB in 0s (298 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvt3a1ysc/libxcb-render-util0_0.3.10-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmro-compat-perl all 0.15-2 [11.8 kB] Fetched 11.8 kB in 0s (216 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvu37meve/libmro-compat-perl_0.15-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libppix-utils-perl all 0.003-2 [28.0 kB] Fetched 28.0 kB in 0s (492 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjriwp3n9/libppix-utils-perl_0.003-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libvorbisenc2 riscv64 1.3.7-3+b1 [70.0 kB] Fetched 70.0 kB in 0s (1197 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5f7wjs_u/libvorbisenc2_1.3.7-3+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libjack-jackd2-0 riscv64 1.9.22~dfsg-5+b1 [290 kB] Fetched 290 kB in 0s (4126 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppkjf686k/libjack-jackd2-0_1.9.22~dfsg-5+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsasl2-2 riscv64 2.1.28+dfsg1-10 [60.6 kB] Fetched 60.6 kB in 0s (1044 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjsvaqxo3/libsasl2-2_2.1.28+dfsg1-10_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtool all 2.5.4-9 [540 kB] Fetched 540 kB in 0s (6455 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvkl_t85t/libtool_2.5.4-9_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 pkgconf riscv64 2.5.1-4 [33.6 kB] Fetched 33.6 kB in 0s (593 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx34zvwez/pkgconf_2.5.1-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1 [319 kB] Fetched 319 kB in 0s (4288 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj8zai2bz/libjs-jquery_3.7.1+dfsg+~3.5.33-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 texinfo-lib riscv64 7.2-5 [808 kB] Fetched 808 kB in 0s (8171 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7k8vc7v4/texinfo-lib_7.2-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libnpth0t64 riscv64 1.8-3+b1 [22.9 kB] Fetched 22.9 kB in 0s (407 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp19h_adau/libnpth0t64_1.8-3+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libqt6network6 riscv64 6.9.2+dfsg-4 [806 kB] Fetched 806 kB in 0s (7978 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpukmwg7jk/libqt6network6_6.9.2+dfsg-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libsqlite3-0 riscv64 3.46.1-9 [910 kB] Fetched 910 kB in 0s (8858 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp393iyxyh/libsqlite3-0_3.46.1-9_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libzstd1 riscv64 1.5.7+dfsg-3+b1 [372 kB] Fetched 372 kB in 0s (4992 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7lyq9nmi/libzstd1_1.5.7+dfsg-3+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libwmflite-0.2-7 riscv64 0.2.13-2 [78.6 kB] Fetched 78.6 kB in 0s (1317 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkl4sm5nj/libwmflite-0.2-7_0.2.13-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Fetched 14.7 kB in 0s (268 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3_i_t06q/libhtml-tagset-perl_3.24-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libqhull-r8.0 riscv64 2020.2-8 [247 kB] Fetched 247 kB in 0s (3652 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7vvq_mjj/libqhull-r8.0_2020.2-8_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 rpcsvc-proto riscv64 1.4.3-1+b2 [62.3 kB] Fetched 62.3 kB in 0s (1088 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu6wwbfr9/rpcsvc-proto_1.4.3-1+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcamd3 riscv64 1:7.12.2+dfsg-1 [46.2 kB] Fetched 46.2 kB in 0s (811 kB/s) dpkg-name: info: moved 'libcamd3_1%3a7.12.2+dfsg-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpcj2r3vt2/libcamd3_7.12.2+dfsg-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libltdl7 riscv64 2.5.4-9 [416 kB] Fetched 416 kB in 0s (5372 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsz_vhlrz/libltdl7_2.5.4-9_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libssl-dev riscv64 3.5.5-1 [6304 kB] Fetched 6304 kB in 0s (15.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp_2xnacc/libssl-dev_3.5.5-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 shared-mime-info riscv64 2.4-5+b3 [756 kB] Fetched 756 kB in 0s (7960 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv4_w6tkm/shared-mime-info_2.4-5+b3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libstring-format-perl all 1.18-1 [9408 B] Fetched 9408 B in 0s (169 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi7_lcliu/libstring-format-perl_1.18-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxs-parse-sublike-perl riscv64 0.41-1 [50.4 kB] Fetched 50.4 kB in 0s (900 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7yvv1qj2/libxs-parse-sublike-perl_0.41-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libthai0 riscv64 0.1.30-1 [51.7 kB] Fetched 51.7 kB in 0s (924 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwwwv2e52/libthai0_0.1.30-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 icu-devtools riscv64 76.1-4+b1 [211 kB] Fetched 211 kB in 0s (3217 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp10i689jp/icu-devtools_76.1-4+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libngtcp2-16 riscv64 1.16.0-1 [141 kB] Fetched 141 kB in 0s (2240 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk1elcnfh/libngtcp2-16_1.16.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblog-any-perl all 1.718-1 [75.0 kB] Fetched 75.0 kB in 0s (1274 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_08xh__3/liblog-any-perl_1.718-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Fetched 19.1 kB in 0s (343 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9gwcna05/libhttp-cookies-perl_6.11-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libavif16 riscv64 1.3.0-1+b2 [138 kB] Fetched 138 kB in 0s (2219 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbe82h8g5/libavif16_1.3.0-1+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxau6 riscv64 1:1.0.11-1+b1 [20.7 kB] Fetched 20.7 kB in 0s (371 kB/s) dpkg-name: info: moved 'libxau6_1%3a1.0.11-1+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpg0lx35b6/libxau6_1.0.11-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libconfig-model-perl all 2.155-1 [398 kB] Fetched 398 kB in 0s (4875 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp05d9met_/libconfig-model-perl_2.155-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libheif-plugin-libde265 riscv64 1.21.2-2 [17.0 kB] Fetched 17.0 kB in 0s (298 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1zrdkmjc/libheif-plugin-libde265_1.21.2-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdrm2 riscv64 2.4.131-1 [40.4 kB] Fetched 40.4 kB in 0s (721 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg8hxazne/libdrm2_2.4.131-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libb2-1 riscv64 0.98.1-1.1+b3 [20.3 kB] Fetched 20.3 kB in 0s (370 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2k17ie4v/libb2-1_0.98.1-1.1+b3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 librtmp-dev riscv64 2.4+20151223.gitfa8646d.1-3+b1 [133 kB] Fetched 133 kB in 0s (2120 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwm1uqf9u/librtmp-dev_2.4+20151223.gitfa8646d.1-3+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 x11proto-dev all 2025.1-1 [605 kB] Fetched 605 kB in 0s (6953 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp34pdevcx/x11proto-dev_2025.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdata-validate-domain-perl all 0.15-1 [11.9 kB] Fetched 11.9 kB in 0s (214 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_qjoojd_/libdata-validate-domain-perl_0.15-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdynaloader-functions-perl all 0.004-2 [12.2 kB] Fetched 12.2 kB in 0s (223 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_51gcoa2/libdynaloader-functions-perl_0.004-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Fetched 250 kB in 0s (3656 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk2g59gkh/libjs-jquery-ui_1.13.2+dfsg-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxxhash0 riscv64 0.8.3-2+b1 [40.6 kB] Fetched 40.6 kB in 0s (690 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp09irvq9e/libxxhash0_0.8.3-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 x11-common all 1:7.7+26 [217 kB] Fetched 217 kB in 0s (3321 kB/s) dpkg-name: info: moved 'x11-common_1%3a7.7+26_all.deb' to '/srv/rebuilderd/tmp/tmp5pz7jomp/x11-common_7.7+26_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 sensible-utils all 0.0.26 [27.0 kB] Fetched 27.0 kB in 0s (488 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfkk886s2/sensible-utils_0.0.26_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libexception-class-perl all 1.45-1 [34.6 kB] Fetched 34.6 kB in 0s (611 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbczf4h1d/libexception-class-perl_1.45-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 hdf5-helpers riscv64 1.14.6+repack-2 [22.1 kB] Fetched 22.1 kB in 0s (397 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxctdy1vg/hdf5-helpers_1.14.6+repack-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgraphicsmagick-q16-3t64 riscv64 1.4+really1.3.46-2 [1202 kB] Fetched 1202 kB in 0s (9092 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgkl_3hxm/libgraphicsmagick-q16-3t64_1.4+really1.3.46-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 liblsan0 riscv64 15.2.0-13 [1326 kB] Fetched 1326 kB in 0s (10.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeq5z3nko/liblsan0_15.2.0-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libncurses-dev riscv64 6.6+20251231-1 [932 kB] Fetched 932 kB in 0s (8992 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpocq0bk6c/libncurses-dev_6.6+20251231-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libboolean-perl all 0.46-3 [9924 B] Fetched 9924 B in 0s (176 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppq_3r17p/libboolean-perl_0.46-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtest-exception-perl all 0.43-3 [16.9 kB] Fetched 16.9 kB in 0s (305 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpie0mbu6c/libtest-exception-perl_0.43-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxml2-dev riscv64 2.15.1+dfsg-2+b1 [1990 kB] Fetched 1990 kB in 0s (12.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpglt6__37/libxml2-dev_2.15.1+dfsg-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 r-base-core riscv64 4.5.2-1 [28.7 MB] Fetched 28.7 MB in 2s (17.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd6v9qvhv/r-base-core_4.5.2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhdf5-hl-cpp-310 riscv64 1.14.6+repack-2 [19.7 kB] Fetched 19.7 kB in 0s (350 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_rj9rap2/libhdf5-hl-cpp-310_1.14.6+repack-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liburi-perl all 5.34-2 [111 kB] Fetched 111 kB in 0s (1825 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfte9usno/liburi-perl_5.34-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpod-parser-perl all 1.67-1 [94.1 kB] Fetched 94.1 kB in 0s (1572 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps4723gdr/libpod-parser-perl_1.67-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libparams-util-perl riscv64 1.102-3+b1 [23.9 kB] Fetched 23.9 kB in 0s (432 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu3jsml0m/libparams-util-perl_1.102-3+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libgfortran5 riscv64 15.2.0-13 [420 kB] Fetched 420 kB in 0s (5488 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp637qi1fr/libgfortran5_15.2.0-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libppi-perl all 1.284-1 [300 kB] Fetched 300 kB in 0s (4274 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplyqkopun/libppi-perl_1.284-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhdf5-hl-310 riscv64 1.14.6+repack-2 [67.1 kB] Fetched 67.1 kB in 0s (1145 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0zvjoyo9/libhdf5-hl-310_1.14.6+repack-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libngtcp2-crypto-ossl-dev riscv64 1.16.0-1 [51.8 kB] Fetched 51.8 kB in 0s (921 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzfllw2gk/libngtcp2-crypto-ossl-dev_1.16.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtime-duration-perl all 1.21-2 [13.1 kB] Fetched 13.1 kB in 0s (238 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj2vt50us/libtime-duration-perl_1.21-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libyuv0 riscv64 0.0.1922.20260106-1 [113 kB] Fetched 113 kB in 0s (1853 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5fxj024l/libyuv0_0.0.1922.20260106-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libreadonly-perl all 2.050-3 [23.1 kB] Fetched 23.1 kB in 0s (426 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpecogu2_e/libreadonly-perl_2.050-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxss1 riscv64 1:1.2.3-1+b4 [16.9 kB] Fetched 16.9 kB in 0s (306 kB/s) dpkg-name: info: moved 'libxss1_1%3a1.2.3-1+b4_riscv64.deb' to '/srv/rebuilderd/tmp/tmp8g9r4gbi/libxss1_1.2.3-1+b4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libcap2 riscv64 1:2.75-10+b5 [29.1 kB] Fetched 29.1 kB in 0s (516 kB/s) dpkg-name: info: moved 'libcap2_1%3a2.75-10+b5_riscv64.deb' to '/srv/rebuilderd/tmp/tmpwt3btxna/libcap2_2.75-10+b5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libclone-perl riscv64 0.47-1+b2 [13.7 kB] Fetched 13.7 kB in 0s (244 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1efwyk7p/libclone-perl_0.47-1+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 octave-dev riscv64 10.3.0-3 [1068 kB] Fetched 1068 kB in 0s (9507 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt2w78isw/octave-dev_10.3.0-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 cpp-15 riscv64 15.2.0-13 [1272 B] Fetched 1272 B in 0s (23.5 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx8gtbrym/cpp-15_15.2.0-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libb-hooks-op-check-perl riscv64 0.22-3+b3 [10.5 kB] Fetched 10.5 kB in 0s (193 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwbnw805i/libb-hooks-op-check-perl_0.22-3+b3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libegl1 riscv64 1.7.0-3 [36.0 kB] Fetched 36.0 kB in 0s (641 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvt8r1s7z/libegl1_1.7.0-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmd0 riscv64 1.1.0-2+b2 [36.7 kB] Fetched 36.7 kB in 0s (649 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9feji9bn/libmd0_1.1.0-2+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libqt6core6t64 riscv64 6.9.2+dfsg-4 [1902 kB] Fetched 1902 kB in 0s (12.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkybujzqw/libqt6core6t64_6.9.2+dfsg-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dash riscv64 0.5.12-12 [101 kB] Fetched 101 kB in 0s (1694 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpme3__k8p/dash_0.5.12-12_riscv64.deb' Downloading dependency 487 of 747: libtext-autoformat-perl:riscv64=1.750000-2 Downloading dependency 488 of 747: debconf:riscv64=1.5.92 Downloading dependency 489 of 747: libsvtav1enc2:riscv64=2.3.0+dfsg-1 Downloading dependency 490 of 747: libhdf5-310:riscv64=1.14.6+repack-2 Downloading dependency 491 of 747: gfortran-riscv64-linux-gnu:riscv64=4:15.2.0-5 Downloading dependency 492 of 747: libwacom9:riscv64=2.18.0-1 Downloading dependency 493 of 747: libapt-pkg7.0:riscv64=3.1.16 Downloading dependency 494 of 747: init-system-helpers:riscv64=1.69 Downloading dependency 495 of 747: libopus0:riscv64=1.6.1-1 Downloading dependency 496 of 747: dh-python:riscv64=7.20260125 Downloading dependency 497 of 747: libmpc3:riscv64=1.3.1-2+b1 Downloading dependency 498 of 747: libatomic1:riscv64=15.2.0-13 Downloading dependency 499 of 747: libglib2.0-0t64:riscv64=2.87.2-3 Downloading dependency 500 of 747: liblz1:riscv64=1.16~rc1-3 Downloading dependency 501 of 747: libpangoft2-1.0-0:riscv64=1.57.0-1 Downloading dependency 502 of 747: libjpeg-dev:riscv64=1:2.1.5-4 Downloading dependency 503 of 747: sed:riscv64=4.9-2 Downloading dependency 504 of 747: libblas-dev:riscv64=3.12.1-7+b1 Downloading dependency 505 of 747: libhdf5-fortran-310:riscv64=1.14.6+repack-2 Downloading dependency 506 of 747: libmime-tools-perl:riscv64=5.517-1 Downloading dependency 507 of 747: findutils:riscv64=4.10.0-3 Downloading dependency 508 of 747: libfile-listing-perl:riscv64=6.16-1 Downloading dependency 509 of 747: libgfortran-15-dev:riscv64=15.2.0-13 Downloading dependency 510 of 747: libfile-basedir-perl:riscv64=0.09-2 Downloading dependency 511 of 747: g++-15:riscv64=15.2.0-13 Downloading dependency 512 of 747: libiterator-util-perl:riscv64=0.02+ds1-2 Downloading dependency 513 of 747: libsubunit-dev:riscv64=1.4.4+1-1 Downloading dependency 514 of 747: libunicode-utf8-perl:riscv64=0.63-1 Downloading dependency 515 of 747: libxcb-render0:riscv64=1.17.0-2+b2 Downloading dependency 516 of 747: libpng16-16t64:riscv64=1.6.55-1 Downloading dependency 517 of 747: gettext:riscv64=0.23.2-1 Downloading dependency 518 of 747: libexporter-tiny-perl:riscv64=1.006003-1 Downloading dependency 519 of 747: libcgraph8:riscv64=14.1.2-1 Downloading dependency 520 of 747: octave-common:riscv64=10.3.0-3 Downloading dependency 521 of 747: default-jdk-doc:riscv64=2:1.21-76 Downloading dependency 522 of 747: ca-certificates-java:riscv64=20240118 Downloading dependency 523 of 747: openjdk-21-jre-headless:riscv64=21.0.10+7-1 Downloading dependency 524 of 747: python3.13-minimal:riscv64=3.13.12-1 Downloading dependency 525 of 747: librav1e0.8:riscv64=0.8.1-7 Downloading dependency 526 of 747: libgraphicsmagick++-q16-12t64:riscv64=1.4+really1.3.46-2 Downloading dependency 527 of 747: zlib1g:riscv64=1:1.3.dfsg+really1.3.1-3 Downloading dependency 528 of 747: libproxy1v5:riscv64=0.5.12-1 Downloading dependency 529 of 747: libmousex-nativetraits-perl:riscv64=1.09-3 Downloading dependency 530 of 747: libxau-dev:riscv64=1:1.0.11-1+b1 Downloading dependency 531 of 747: cme:riscv64=1.044-2 Downloading dependency 532 of 747: libpcre2-32-0:riscv64=10.46-1+b1 Downloading dependency 533 of 747: libxcb-render-util0:riscv64=0.3.10-1+b1 Downloading dependency 534 of 747: libmro-compat-perl:riscv64=0.15-2 Downloading dependency 535 of 747: libppix-utils-perl:riscv64=0.003-2 Downloading dependency 536 of 747: libvorbisenc2:riscv64=1.3.7-3+b1 Downloading dependency 537 of 747: libjack-jackd2-0:riscv64=1.9.22~dfsg-5+b1 Downloading dependency 538 of 747: libsasl2-2:riscv64=2.1.28+dfsg1-10 Downloading dependency 539 of 747: libtool:riscv64=2.5.4-9 Downloading dependency 540 of 747: pkgconf:riscv64=2.5.1-4 Downloading dependency 541 of 747: libjs-jquery:riscv64=3.7.1+dfsg+~3.5.33-1 Downloading dependency 542 of 747: texinfo-lib:riscv64=7.2-5 Downloading dependency 543 of 747: libnpth0t64:riscv64=1.8-3+b1 Downloading dependency 544 of 747: libqt6network6:riscv64=6.9.2+dfsg-4 Downloading dependency 545 of 747: libsqlite3-0:riscv64=3.46.1-9 Downloading dependency 546 of 747: libzstd1:riscv64=1.5.7+dfsg-3+b1 Downloading dependency 547 of 747: libwmflite-0.2-7:riscv64=0.2.13-2 Downloading dependency 548 of 747: libhtml-tagset-perl:riscv64=3.24-1 Downloading dependency 549 of 747: libqhull-r8.0:riscv64=2020.2-8 Downloading dependency 550 of 747: rpcsvc-proto:riscv64=1.4.3-1+b2 Downloading dependency 551 of 747: libcamd3:riscv64=1:7.12.2+dfsg-1 Downloading dependency 552 of 747: libltdl7:riscv64=2.5.4-9 Downloading dependency 553 of 747: libssl-dev:riscv64=3.5.5-1 Downloading dependency 554 of 747: shared-mime-info:riscv64=2.4-5+b3 Downloading dependency 555 of 747: libstring-format-perl:riscv64=1.18-1 Downloading dependency 556 of 747: libxs-parse-sublike-perl:riscv64=0.41-1 Downloading dependency 557 of 747: libthai0:riscv64=0.1.30-1 Downloading dependency 558 of 747: icu-devtools:riscv64=76.1-4+b1 Downloading dependency 559 of 747: libngtcp2-16:riscv64=1.16.0-1 Downloading dependency 560 of 747: liblog-any-perl:riscv64=1.718-1 Downloading dependency 561 of 747: libhttp-cookies-perl:riscv64=6.11-1 Downloading dependency 562 of 747: libavif16:riscv64=1.3.0-1+b2 Downloading dependency 563 of 747: libxau6:riscv64=1:1.0.11-1+b1 Downloading dependency 564 of 747: libconfig-model-perl:riscv64=2.155-1 Downloading dependency 565 of 747: libheif-plugin-libde265:riscv64=1.21.2-2 Downloading dependency 566 of 747: libdrm2:riscv64=2.4.131-1 Downloading dependency 567 of 747: libb2-1:riscv64=0.98.1-1.1+b3 Downloading dependency 568 of 747: librtmp-dev:riscv64=2.4+20151223.gitfa8646d.1-3+b1 Downloading dependency 569 of 747: x11proto-dev:riscv64=2025.1-1 Downloading dependency 570 of 747: libdata-validate-domain-perl:riscv64=0.15-1 Downloading dependency 571 of 747: libdynaloader-functions-perl:riscv64=0.004-2 Downloading dependency 572 of 747: libjs-jquery-ui:riscv64=1.13.2+dfsg-1 Downloading dependency 573 of 747: libxxhash0:riscv64=0.8.3-2+b1 Downloading dependency 574 of 747: x11-common:riscv64=1:7.7+26 Downloading dependency 575 of 747: sensible-utils:riscv64=0.0.26 Downloading dependency 576 of 747: libexception-class-perl:riscv64=1.45-1 Downloading dependency 577 of 747: hdf5-helpers:riscv64=1.14.6+repack-2 Downloading dependency 578 of 747: libgraphicsmagick-q16-3t64:riscv64=1.4+really1.3.46-2 Downloading dependency 579 of 747: liblsan0:riscv64=15.2.0-13 Downloading dependency 580 of 747: libncurses-dev:riscv64=6.6+20251231-1 Downloading dependency 581 of 747: libboolean-perl:riscv64=0.46-3 Downloading dependency 582 of 747: libtest-exception-perl:riscv64=0.43-3 Downloading dependency 583 of 747: libxml2-dev:riscv64=2.15.1+dfsg-2+b1 Downloading dependency 584 of 747: r-base-core:riscv64=4.5.2-1 Downloading dependency 585 of 747: libhdf5-hl-cpp-310:riscv64=1.14.6+repack-2 Downloading dependency 586 of 747: liburi-perl:riscv64=5.34-2 Downloading dependency 587 of 747: libpod-parser-perl:riscv64=1.67-1 Downloading dependency 588 of 747: libparams-util-perl:riscv64=1.102-3+b1 Downloading dependency 589 of 747: libgfortran5:riscv64=15.2.0-13 Downloading dependency 590 of 747: libppi-perl:riscv64=1.284-1 Downloading dependency 591 of 747: libhdf5-hl-310:riscv64=1.14.6+repack-2 Downloading dependency 592 of 747: libngtcp2-crypto-ossl-dev:riscv64=1.16.0-1 Downloading dependency 593 of 747: libtime-duration-perl:riscv64=1.21-2 Downloading dependency 594 of 747: libyuv0:riscv64=0.0.1922.20260106-1 Downloading dependency 595 of 747: libreadonly-perl:riscv64=2.050-3 Downloading dependency 596 of 747: libxss1:riscv64=1:1.2.3-1+b4 Downloading dependency 597 of 747: libcap2:riscv64=1:2.75-10+b5 Downloading dependency 598 of 747: libclone-perl:riscv64=0.47-1+b2 Downloading dependency 599 of 747: octave-dev:riscv64=10.3.0-3 Downloading dependency 600 of 747: cpp-15:riscv64=15.2.0-13 Downloading dependency 601 of 747: libb-hooks-op-check-perl:riscv64=0.22-3+b3 Downloading dependency 602 of 747: libegl1:riscv64=1.7.0-3 Downloading dependency 603 of 747: libmd0:riscv64=1.1.0-2+b2 Downloading dependency 604 of 747: libqt6core6t64:riscv64=6.9.2+dfsg-4 Downloading dependency 605 of 747: dash:riscv64=0.5.12-12 Downloading dependency 606 of 747: libregexp-common-perl:riscv64=2024080801-1Get:1 http://deb.debian.org/debian unstable/main riscv64 libregexp-common-perl all 2024080801-1 [167 kB] Fetched 167 kB in 0s (2593 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnpvrlw5s/libregexp-common-perl_2024080801-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdata-validate-ip-perl all 0.31-1 [20.6 kB] Fetched 20.6 kB in 0s (340 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv5brb8ag/libdata-validate-ip-perl_0.31-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3.13-minimal riscv64 3.13.12-1 [862 kB] Fetched 862 kB in 0s (8655 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy0hcnxja/libpython3.13-minimal_3.13.12-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 liblz4-1 riscv64 1.10.0-6 [86.6 kB] Fetched 86.6 kB in 0s (1476 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_fkc7rl6/liblz4-1_1.10.0-6_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgvplugin-gd8 riscv64 14.1.2-1 [26.9 kB] Fetched 26.9 kB in 0s (475 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7ia2wdcw/libgvplugin-gd8_14.1.2-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libcurl4t64 riscv64 8.18.0-2 [418 kB] Fetched 418 kB in 0s (5464 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvfno3j3i/libcurl4t64_8.18.0-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 krb5-multidev riscv64 1.22.1-2 [127 kB] Fetched 127 kB in 0s (2121 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplo2ew61x/krb5-multidev_1.22.1-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgdbm-compat4t64 riscv64 1.26-1+b1 [53.1 kB] Fetched 53.1 kB in 0s (947 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp003eqodh/libgdbm-compat4t64_1.26-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-shape0 riscv64 1.17.0-2+b2 [105 kB] Fetched 105 kB in 0s (1771 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpio4mhkvb/libxcb-shape0_1.17.0-2+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libjson-perl all 4.10000-1 [87.5 kB] Fetched 87.5 kB in 0s (1482 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfd7y_vtp/libjson-perl_4.10000-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 licensecheck all 3.3.9-1 [50.1 kB] Fetched 50.1 kB in 0s (898 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4v36yyul/licensecheck_3.3.9-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libccolamd3 riscv64 1:7.12.2+dfsg-1 [47.5 kB] Fetched 47.5 kB in 0s (823 kB/s) dpkg-name: info: moved 'libccolamd3_1%3a7.12.2+dfsg-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpt4bgrlng/libccolamd3_7.12.2+dfsg-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsub-uplevel-perl all 0.2800-3 [14.0 kB] Fetched 14.0 kB in 0s (258 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjaywzewp/libsub-uplevel-perl_0.2800-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 gcc-15 riscv64 15.2.0-13 [524 kB] Fetched 524 kB in 0s (6379 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv_dqxzjx/gcc-15_15.2.0-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblist-someutils-perl all 0.59-1 [37.1 kB] Fetched 37.1 kB in 0s (658 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8ykhxgqs/liblist-someutils-perl_0.59-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 gcc-15-riscv64-linux-gnu riscv64 15.2.0-13 [28.6 MB] Fetched 28.6 MB in 2s (17.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprd37ni6b/gcc-15-riscv64-linux-gnu_15.2.0-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libclass-data-inheritable-perl all 0.10-1 [8632 B] Fetched 8632 B in 0s (157 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1oxjz4p1/libclass-data-inheritable-perl_0.10-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libspqr4 riscv64 1:7.12.2+dfsg-1 [139 kB] Fetched 139 kB in 0s (2250 kB/s) dpkg-name: info: moved 'libspqr4_1%3a7.12.2+dfsg-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpiivrdl0l/libspqr4_7.12.2+dfsg-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpcre2-dev riscv64 10.46-1+b1 [2138 kB] Fetched 2138 kB in 0s (12.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa6614nmu/libpcre2-dev_10.46-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libgpg-error0 riscv64 1.58-2 [90.6 kB] Fetched 90.6 kB in 0s (1511 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfor7m4xl/libgpg-error0_1.58-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libwww-mechanize-perl all 2.20-1 [117 kB] Fetched 117 kB in 0s (1945 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb474yw3g/libwww-mechanize-perl_2.20-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblzo2-2 riscv64 2.10-3+b2 [61.3 kB] Fetched 61.3 kB in 0s (1069 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpng3zc8mf/liblzo2-2_2.10-3+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-icccm4 riscv64 0.4.2-1+b1 [27.2 kB] Fetched 27.2 kB in 0s (491 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5_hr32af/libxcb-icccm4_0.4.2-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmagic1t64 riscv64 1:5.46-5+b1 [117 kB] Fetched 117 kB in 0s (1924 kB/s) dpkg-name: info: moved 'libmagic1t64_1%3a5.46-5+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpsl9zzfri/libmagic1t64_5.46-5+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libintl-perl all 1.37-1 [696 kB] Fetched 696 kB in 0s (7469 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv4ohro8f/libintl-perl_1.37-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libsmartcols1 riscv64 2.41.3-3 [155 kB] Fetched 155 kB in 0s (2504 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1x6psygo/libsmartcols1_2.41.3-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libgomp1 riscv64 15.2.0-13 [131 kB] Fetched 131 kB in 0s (2133 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1bc2uki1/libgomp1_15.2.0-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Fetched 18.0 kB in 0s (323 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp1z0css2/libclass-method-modifiers-perl_2.15-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtask-weaken-perl all 1.06-2 [9364 B] Fetched 9364 B in 0s (172 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2i8qmrm2/libtask-weaken-perl_1.06-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblua5.4-0 riscv64 5.4.8-1+b1 [147 kB] Fetched 147 kB in 0s (2382 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpniy1i7j2/liblua5.4-0_5.4.8-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdeflate0 riscv64 1.23-2+b1 [38.4 kB] Fetched 38.4 kB in 0s (684 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyymohv44/libdeflate0_1.23-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libpath-tiny-perl all 0.148-1 [56.7 kB] Fetched 56.7 kB in 0s (1002 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvzj3vd1w/libpath-tiny-perl_0.148-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblzma-dev riscv64 5.8.2-2 [520 kB] Fetched 520 kB in 0s (6344 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnfu1az9e/liblzma-dev_5.8.2-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsub-exporter-perl all 0.990-1 [50.6 kB] Fetched 50.6 kB in 0s (890 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm4znqhgy/libsub-exporter-perl_0.990-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpcre2-posix3 riscv64 10.46-1+b1 [63.9 kB] Fetched 63.9 kB in 0s (1108 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwdei3vwt/libpcre2-posix3_10.46-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 openjdk-21-jdk-headless riscv64 21.0.10+7-1 [82.3 MB] Fetched 82.3 MB in 5s (18.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6aehhfc_/openjdk-21-jdk-headless_21.0.10+7-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpcre2-8-0 riscv64 10.46-1+b1 [297 kB] Fetched 297 kB in 0s (3999 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn6nkr7nj/libpcre2-8-0_10.46-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 comerr-dev riscv64 2.1-1.47.2-3+b8 [60.9 kB] Fetched 60.9 kB in 0s (1041 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkw17lhqz/comerr-dev_2.1-1.47.2-3+b8_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libglx0 riscv64 1.7.0-3 [31.0 kB] Fetched 31.0 kB in 0s (551 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2_vos682/libglx0_1.7.0-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libduktape207 riscv64 2.7.0-2+b3 [138 kB] Fetched 138 kB in 0s (2240 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpauls3eqc/libduktape207_2.7.0-2+b3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfftw3-dev riscv64 3.3.10-2+b2 [1479 kB] Fetched 1479 kB in 0s (10.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps9yzujy_/libfftw3-dev_3.3.10-2+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdata-messagepack-perl riscv64 1.02-3 [33.3 kB] Fetched 33.3 kB in 0s (586 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvg2af2xg/libdata-messagepack-perl_1.02-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB] Fetched 21.0 kB in 0s (382 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuqfjhxfz/libhtml-html5-entities-perl_0.004-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Fetched 21.7 kB in 0s (392 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfqc8cs2w/libnet-ipv6addr-perl_1.02-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libparams-classify-perl riscv64 0.015-2+b5 [22.4 kB] Fetched 22.4 kB in 0s (398 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp492u5w8/libparams-classify-perl_0.015-2+b5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtirpc-common all 1.3.6+ds-1 [11.0 kB] Fetched 11.0 kB in 0s (203 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpna3341ze/libtirpc-common_1.3.6+ds-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libappstream5 riscv64 1.1.2-1 [220 kB] Fetched 220 kB in 0s (3323 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwtlk5dtv/libappstream5_1.1.2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgvc7 riscv64 14.1.2-1 [364 kB] Fetched 364 kB in 0s (4696 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgofhgbtv/libgvc7_14.1.2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtext-template-perl all 1.61-1 [54.4 kB] Fetched 54.4 kB in 0s (921 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0l1n8jf5/libtext-template-perl_1.61-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgvpr2 riscv64 14.1.2-1 [123 kB] Fetched 123 kB in 0s (1929 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpio1vo22b/libgvpr2_14.1.2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libwacom-common all 2.18.0-1 [117 kB] Fetched 117 kB in 0s (1917 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptzi49a9w/libwacom-common_2.18.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblingua-en-inflect-perl all 1.905-2 [52.7 kB] Fetched 52.7 kB in 0s (922 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5gad0kzk/liblingua-en-inflect-perl_1.905-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsereal-encoder-perl riscv64 5.004+ds-1+b3 [108 kB] Fetched 108 kB in 0s (1780 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbvpqg7yo/libsereal-encoder-perl_5.004+ds-1+b3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libexpat1-dev riscv64 2.7.4-1 [338 kB] Fetched 338 kB in 0s (4632 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy08zgb7g/libexpat1-dev_2.7.4-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libgetopt-long-descriptive-perl all 0.116-2 [27.7 kB] Fetched 27.7 kB in 0s (500 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvastneyl/libgetopt-long-descriptive-perl_0.116-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libconvert-binhex-perl all 1.125-3 [27.4 kB] Fetched 27.4 kB in 0s (491 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2bohss4n/libconvert-binhex-perl_1.125-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libuv1t64 riscv64 1.51.0-2+b1 [156 kB] Fetched 156 kB in 0s (2500 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbtcof_hf/libuv1t64_1.51.0-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libasound2-data all 1.2.15.3-1 [21.2 kB] Fetched 21.2 kB in 0s (389 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_1s4m60n/libasound2-data_1.2.15.3-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libexpat1 riscv64 2.7.4-1 [111 kB] Fetched 111 kB in 0s (1853 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuglruxcv/libexpat1_2.7.4-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 gfortran-15 riscv64 15.2.0-13 [18.5 kB] Fetched 18.5 kB in 0s (319 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpokcy13oi/gfortran-15_15.2.0-13_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 gpgconf riscv64 2.4.8-5 [128 kB] Fetched 128 kB in 0s (2087 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6jhtstfy/gpgconf_2.4.8-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb1 riscv64 1.17.0-2+b2 [145 kB] Fetched 145 kB in 0s (1980 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp55sjtk9k/libxcb1_1.17.0-2+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfftw3-double3 riscv64 3.3.10-2+b2 [376 kB] Fetched 376 kB in 0s (5039 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4_y50bz0/libfftw3-double3_3.3.10-2+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libc6 riscv64 2.42-13 [1422 kB] Fetched 1422 kB in 0s (10.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmc0ta7zy/libc6_2.42-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtk8.6 riscv64 8.6.17-1+b1 [802 kB] Fetched 802 kB in 0s (8159 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7ryz0u2w/libtk8.6_8.6.17-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgmpxx4ldbl riscv64 2:6.3.0+dfsg-5+b1 [329 kB] Fetched 329 kB in 0s (4630 kB/s) dpkg-name: info: moved 'libgmpxx4ldbl_2%3a6.3.0+dfsg-5+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmph4uf5w59/libgmpxx4ldbl_6.3.0+dfsg-5+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 librtmp1 riscv64 2.4+20151223.gitfa8646d.1-3+b1 [59.2 kB] Fetched 59.2 kB in 0s (1033 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc0fpnrt_/librtmp1_2.4+20151223.gitfa8646d.1-3+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libset-intspan-perl all 1.19-3 [25.3 kB] Fetched 25.3 kB in 0s (456 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgrg_fzd8/libset-intspan-perl_1.19-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmousex-strictconstructor-perl all 0.02-3 [5304 B] Fetched 5304 B in 0s (98.0 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2100eu34/libmousex-strictconstructor-perl_0.02-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3.13-stdlib riscv64 3.13.12-1 [1936 kB] Fetched 1936 kB in 0s (12.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3_7nqo_5/libpython3.13-stdlib_3.13.12-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libngtcp2-dev riscv64 1.16.0-1 [452 kB] Fetched 452 kB in 0s (5410 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyijz8rei/libngtcp2-dev_1.16.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libnet-ssleay-perl riscv64 1.94-3+b1 [339 kB] Fetched 339 kB in 0s (4657 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps3339k89/libnet-ssleay-perl_1.94-3+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtinfo6 riscv64 6.6+20251231-1 [352 kB] Fetched 352 kB in 0s (4681 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgc2x7z7i/libtinfo6_6.6+20251231-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libperl-critic-perl all 1.156-1 [685 kB] Fetched 685 kB in 0s (7407 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx8obuy3h/libperl-critic-perl_1.156-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Fetched 26.8 kB in 0s (473 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph7ja6gfz/libipc-system-simple-perl_1.30-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 xkb-data all 2.46-2 [830 kB] Fetched 830 kB in 0s (8291 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnu6eq47u/xkb-data_2.46-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblog-log4perl-perl all 1.57-1 [367 kB] Fetched 367 kB in 0s (4881 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnlona78r/liblog-log4perl-perl_1.57-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfftw3-long3 riscv64 3.3.10-2+b2 [701 kB] Fetched 701 kB in 0s (7631 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4im01um_/libfftw3-long3_3.3.10-2+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libqt6help6 riscv64 6.9.2-5 [191 kB] Fetched 191 kB in 0s (2950 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplu752cxc/libqt6help6_6.9.2-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libppix-regexp-perl all 0.091-1 [248 kB] Fetched 248 kB in 0s (3671 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph7ar2whd/libppix-regexp-perl_0.091-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 gcc riscv64 4:15.2.0-5 [5156 B] Fetched 5156 B in 0s (95.5 kB/s) dpkg-name: info: moved 'gcc_4%3a15.2.0-5_riscv64.deb' to '/srv/rebuilderd/tmp/tmpbd4v3cj0/gcc_15.2.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libselinux1 riscv64 3.9-4+b1 [89.1 kB] Fetched 89.1 kB in 0s (1507 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg1ifrcj9/libselinux1_3.9-4+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libperlio-gzip-perl riscv64 0.20-1+b3 [17.6 kB] Fetched 17.6 kB in 0s (319 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp67hiytjq/libperlio-gzip-perl_0.20-1+b3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 default-jre-headless riscv64 2:1.21-76 [3196 B] Fetched 3196 B in 0s (59.5 kB/s) dpkg-name: info: moved 'default-jre-headless_2%3a1.21-76_riscv64.deb' to '/srv/rebuilderd/tmp/tmplhb4ej5_/default-jre-headless_1.21-76_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpod-spell-perl all 1.27-1 [32.0 kB] Fetched 32.0 kB in 0s (576 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc24sgkad/libpod-spell-perl_1.27-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsuitesparseconfig7 riscv64 1:7.12.2+dfsg-1 [33.4 kB] Fetched 33.4 kB in 0s (589 kB/s) dpkg-name: info: moved 'libsuitesparseconfig7_1%3a7.12.2+dfsg-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp8z5kbo2o/libsuitesparseconfig7_7.12.2+dfsg-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libnet-smtp-ssl-perl all 1.04-2 [6548 B] Fetched 6548 B in 0s (112 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpljbr117c/libnet-smtp-ssl-perl_1.04-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libxapian30 riscv64 1.4.29-3+b1 [1136 kB] Fetched 1136 kB in 0s (9909 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw9ypob47/libxapian30_1.4.29-3+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcups2t64 riscv64 2.4.16-1 [252 kB] Fetched 252 kB in 0s (3674 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp94_6t99i/libcups2t64_2.4.16-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 liblerc4 riscv64 4.0.0+ds-5+b1 [177 kB] Fetched 177 kB in 0s (2709 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuqyxco4s/liblerc4_4.0.0+ds-5+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 dpkg riscv64 1.23.5 [1528 kB] Fetched 1528 kB in 0s (11.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnjfk2_e2/dpkg_1.23.5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdeflate-dev riscv64 1.23-2+b1 [90.0 kB] Fetched 90.0 kB in 0s (1494 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb87dmt1f/libdeflate-dev_1.23-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libstdc++-15-dev riscv64 15.2.0-13 [6162 kB] Fetched 6162 kB in 0s (15.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo0loa9u0/libstdc++-15-dev_15.2.0-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libjs-sphinxdoc all 8.2.3-12 [27.9 kB] Fetched 27.9 kB in 0s (496 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppgt5qh8d/libjs-sphinxdoc_8.2.3-12_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dh-exec riscv64 0.31 [25.3 kB] Fetched 25.3 kB in 0s (430 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9gc8lkv_/dh-exec_0.31_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libassuan9 riscv64 3.0.2-2+b1 [61.4 kB] Fetched 61.4 kB in 0s (1070 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiw7lz5gz/libassuan9_3.0.2-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libc-gconv-modules-extra riscv64 2.42-13 [1125 kB] Fetched 1125 kB in 0s (9870 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbuxoaq2w/libc-gconv-modules-extra_2.42-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxext6 riscv64 2:1.3.4-1+b4 [51.1 kB] Fetched 51.1 kB in 0s (904 kB/s) dpkg-name: info: moved 'libxext6_2%3a1.3.4-1+b4_riscv64.deb' to '/srv/rebuilderd/tmp/tmp0tzm5nva/libxext6_1.3.4-1+b4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 man-db riscv64 2.13.1-1 [1458 kB] Fetched 1458 kB in 0s (10.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5_z1ovwm/man-db_2.13.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhdf5-cpp-310 riscv64 1.14.6+repack-2 [126 kB] Fetched 126 kB in 0s (2061 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc6wceqc4/libhdf5-cpp-310_1.14.6+repack-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libc-bin riscv64 2.42-13 [610 kB] Fetched 610 kB in 0s (6991 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp66kxb5nx/libc-bin_2.42-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtext-markdown-discount-perl riscv64 0.18-1 [13.0 kB] Fetched 13.0 kB in 0s (237 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnpk473ar/libtext-markdown-discount-perl_0.18-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libjsoncpp26 riscv64 1.9.6-5 [79.0 kB] Fetched 79.0 kB in 0s (1358 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1223rqae/libjsoncpp26_1.9.6-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 doxygen riscv64 1.15.0+ds1-1+b1 [5364 kB] Fetched 5364 kB in 0s (15.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0xe3m3f_/doxygen_1.15.0+ds1-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxshmfence1 riscv64 1.3.3-1+b1 [11.1 kB] Fetched 11.1 kB in 0s (204 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpft70_hvn/libxshmfence1_1.3.3-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 cpp riscv64 4:15.2.0-5 [1572 B] Fetched 1572 B in 0s (25.5 kB/s) dpkg-name: info: moved 'cpp_4%3a15.2.0-5_riscv64.deb' to '/srv/rebuilderd/tmp/tmp54mp9q4_/cpp_15.2.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpangocairo-1.0-0 riscv64 1.57.0-1 [35.1 kB] Fetched 35.1 kB in 0s (601 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmcop149r/libpangocairo-1.0-0_1.57.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsndfile1 riscv64 1.2.2-4 [207 kB] Fetched 207 kB in 0s (3139 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb9txc28j/libsndfile1_1.2.2-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 media-types all 14.0.0 [30.8 kB] Fetched 30.8 kB in 0s (532 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz3uq4a7k/media-types_14.0.0_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Fetched 14.1 kB in 0s (254 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpedcooaon/libregexp-wildcards-perl_1.05-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libqt6gui6 riscv64 6.9.2+dfsg-4 [3257 kB] Fetched 3257 kB in 0s (13.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8c33g8q2/libqt6gui6_6.9.2+dfsg-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 pkgconf-bin riscv64 2.5.1-4 [35.1 kB] Fetched 35.1 kB in 0s (607 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcgtaukqk/pkgconf-bin_2.5.1-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 g++ riscv64 4:15.2.0-5 [1332 B] Fetched 1332 B in 0s (24.8 kB/s) dpkg-name: info: moved 'g++_4%3a15.2.0-5_riscv64.deb' to '/srv/rebuilderd/tmp/tmpdmi4n431/g++_15.2.0-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libngtcp2-crypto-ossl0 riscv64 1.16.0-1 [27.7 kB] Fetched 27.7 kB in 0s (500 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3kc4f61f/libngtcp2-crypto-ossl0_1.16.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 unzip riscv64 6.0-29 [173 kB] Fetched 173 kB in 0s (2731 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmiq5li6q/unzip_6.0-29_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 cmake riscv64 4.2.3-2 [12.1 MB] Fetched 12.1 MB in 1s (16.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyj0o54kt/cmake_4.2.3-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libogg0 riscv64 1.3.6-2 [24.0 kB] Fetched 24.0 kB in 0s (420 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpndke2144/libogg0_1.3.6-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libssl3t64 riscv64 3.5.5-1 [2211 kB] Fetched 2211 kB in 0s (12.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp216l6tpm/libssl3t64_3.5.5-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdebconfclient0 riscv64 0.282+b2 [11.0 kB] Fetched 11.0 kB in 0s (203 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa_h9je0y/libdebconfclient0_0.282+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libaudit-common all 1:4.1.2-1 [14.3 kB] Fetched 14.3 kB in 0s (254 kB/s) dpkg-name: info: moved 'libaudit-common_1%3a4.1.2-1_all.deb' to '/srv/rebuilderd/tmp/tmp3ng0m4jb/libaudit-common_4.1.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 base-passwd riscv64 3.6.8 [54.8 kB] Fetched 54.8 kB in 0s (957 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7hptf26q/base-passwd_3.6.8_riscv64.deb' Downloading dependency 607 of 747: libdata-validate-ip-perl:riscv64=0.31-1 Downloading dependency 608 of 747: libpython3.13-minimal:riscv64=3.13.12-1 Downloading dependency 609 of 747: liblz4-1:riscv64=1.10.0-6 Downloading dependency 610 of 747: libgvplugin-gd8:riscv64=14.1.2-1 Downloading dependency 611 of 747: libcurl4t64:riscv64=8.18.0-2 Downloading dependency 612 of 747: krb5-multidev:riscv64=1.22.1-2 Downloading dependency 613 of 747: libgdbm-compat4t64:riscv64=1.26-1+b1 Downloading dependency 614 of 747: libxcb-shape0:riscv64=1.17.0-2+b2 Downloading dependency 615 of 747: libjson-perl:riscv64=4.10000-1 Downloading dependency 616 of 747: licensecheck:riscv64=3.3.9-1 Downloading dependency 617 of 747: libccolamd3:riscv64=1:7.12.2+dfsg-1 Downloading dependency 618 of 747: libsub-uplevel-perl:riscv64=0.2800-3 Downloading dependency 619 of 747: gcc-15:riscv64=15.2.0-13 Downloading dependency 620 of 747: liblist-someutils-perl:riscv64=0.59-1 Downloading dependency 621 of 747: gcc-15-riscv64-linux-gnu:riscv64=15.2.0-13 Downloading dependency 622 of 747: libclass-data-inheritable-perl:riscv64=0.10-1 Downloading dependency 623 of 747: libspqr4:riscv64=1:7.12.2+dfsg-1 Downloading dependency 624 of 747: libpcre2-dev:riscv64=10.46-1+b1 Downloading dependency 625 of 747: libgpg-error0:riscv64=1.58-2 Downloading dependency 626 of 747: libwww-mechanize-perl:riscv64=2.20-1 Downloading dependency 627 of 747: liblzo2-2:riscv64=2.10-3+b2 Downloading dependency 628 of 747: libxcb-icccm4:riscv64=0.4.2-1+b1 Downloading dependency 629 of 747: libmagic1t64:riscv64=1:5.46-5+b1 Downloading dependency 630 of 747: libintl-perl:riscv64=1.37-1 Downloading dependency 631 of 747: libsmartcols1:riscv64=2.41.3-3 Downloading dependency 632 of 747: libgomp1:riscv64=15.2.0-13 Downloading dependency 633 of 747: libclass-method-modifiers-perl:riscv64=2.15-1 Downloading dependency 634 of 747: libtask-weaken-perl:riscv64=1.06-2 Downloading dependency 635 of 747: liblua5.4-0:riscv64=5.4.8-1+b1 Downloading dependency 636 of 747: libdeflate0:riscv64=1.23-2+b1 Downloading dependency 637 of 747: libpath-tiny-perl:riscv64=0.148-1 Downloading dependency 638 of 747: liblzma-dev:riscv64=5.8.2-2 Downloading dependency 639 of 747: libsub-exporter-perl:riscv64=0.990-1 Downloading dependency 640 of 747: libpcre2-posix3:riscv64=10.46-1+b1 Downloading 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Downloading dependency 670 of 747: libtk8.6:riscv64=8.6.17-1+b1 Downloading dependency 671 of 747: libgmpxx4ldbl:riscv64=2:6.3.0+dfsg-5+b1 Downloading dependency 672 of 747: librtmp1:riscv64=2.4+20151223.gitfa8646d.1-3+b1 Downloading dependency 673 of 747: libset-intspan-perl:riscv64=1.19-3 Downloading dependency 674 of 747: libmousex-strictconstructor-perl:riscv64=0.02-3 Downloading dependency 675 of 747: libpython3.13-stdlib:riscv64=3.13.12-1 Downloading dependency 676 of 747: libngtcp2-dev:riscv64=1.16.0-1 Downloading dependency 677 of 747: libnet-ssleay-perl:riscv64=1.94-3+b1 Downloading dependency 678 of 747: libtinfo6:riscv64=6.6+20251231-1 Downloading dependency 679 of 747: libperl-critic-perl:riscv64=1.156-1 Downloading dependency 680 of 747: libipc-system-simple-perl:riscv64=1.30-2 Downloading dependency 681 of 747: xkb-data:riscv64=2.46-2 Downloading dependency 682 of 747: liblog-log4perl-perl:riscv64=1.57-1 Downloading dependency 683 of 747: libfftw3-long3:riscv64=3.3.10-2+b2 Downloading dependency 684 of 747: libqt6help6:riscv64=6.9.2-5 Downloading dependency 685 of 747: libppix-regexp-perl:riscv64=0.091-1 Downloading dependency 686 of 747: gcc:riscv64=4:15.2.0-5 Downloading dependency 687 of 747: libselinux1:riscv64=3.9-4+b1 Downloading dependency 688 of 747: libperlio-gzip-perl:riscv64=0.20-1+b3 Downloading dependency 689 of 747: default-jre-headless:riscv64=2:1.21-76 Downloading dependency 690 of 747: libpod-spell-perl:riscv64=1.27-1 Downloading dependency 691 of 747: libsuitesparseconfig7:riscv64=1:7.12.2+dfsg-1 Downloading dependency 692 of 747: libnet-smtp-ssl-perl:riscv64=1.04-2 Downloading dependency 693 of 747: libxapian30:riscv64=1.4.29-3+b1 Downloading dependency 694 of 747: libcups2t64:riscv64=2.4.16-1 Downloading dependency 695 of 747: liblerc4:riscv64=4.0.0+ds-5+b1 Downloading dependency 696 of 747: dpkg:riscv64=1.23.5 Downloading dependency 697 of 747: libdeflate-dev:riscv64=1.23-2+b1 Downloading dependency 698 of 747: libstdc++-15-dev:riscv64=15.2.0-13 Downloading dependency 699 of 747: libjs-sphinxdoc:riscv64=8.2.3-12 Downloading dependency 700 of 747: dh-exec:riscv64=0.31 Downloading dependency 701 of 747: libassuan9:riscv64=3.0.2-2+b1 Downloading dependency 702 of 747: libc-gconv-modules-extra:riscv64=2.42-13 Downloading dependency 703 of 747: libxext6:riscv64=2:1.3.4-1+b4 Downloading dependency 704 of 747: man-db:riscv64=2.13.1-1 Downloading dependency 705 of 747: libhdf5-cpp-310:riscv64=1.14.6+repack-2 Downloading dependency 706 of 747: libc-bin:riscv64=2.42-13 Downloading dependency 707 of 747: libtext-markdown-discount-perl:riscv64=0.18-1 Downloading dependency 708 of 747: libjsoncpp26:riscv64=1.9.6-5 Downloading dependency 709 of 747: doxygen:riscv64=1.15.0+ds1-1+b1 Downloading dependency 710 of 747: libxshmfence1:riscv64=1.3.3-1+b1 Downloading dependency 711 of 747: cpp:riscv64=4:15.2.0-5 Downloading dependency 712 of 747: libpangocairo-1.0-0:riscv64=1.57.0-1 Downloading dependency 713 of 747: libsndfile1:riscv64=1.2.2-4 Downloading dependency 714 of 747: media-types:riscv64=14.0.0 Downloading dependency 715 of 747: libregexp-wildcards-perl:riscv64=1.05-3 Downloading dependency 716 of 747: libqt6gui6:riscv64=6.9.2+dfsg-4 Downloading dependency 717 of 747: pkgconf-bin:riscv64=2.5.1-4 Downloading dependency 718 of 747: g++:riscv64=4:15.2.0-5 Downloading dependency 719 of 747: libngtcp2-crypto-ossl0:riscv64=1.16.0-1 Downloading dependency 720 of 747: unzip:riscv64=6.0-29 Downloading dependency 721 of 747: cmake:riscv64=4.2.3-2 Downloading dependency 722 of 747: libogg0:riscv64=1.3.6-2 Downloading dependency 723 of 747: libssl3t64:riscv64=3.5.5-1 Downloading dependency 724 of 747: libdebconfclient0:riscv64=0.282+b2 Downloading dependency 725 of 747: libaudit-common:riscv64=1:4.1.2-1 Downloading dependency 726 of 747: base-passwd:riscv64=3.6.8 Downloading dependency 727 of 747: gettext-base:riscv64=0.23.2-1Get:1 http://deb.debian.org/debian unstable/main riscv64 gettext-base riscv64 0.23.2-1 [244 kB] Fetched 244 kB in 0s (3624 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdlheh5aq/gettext-base_0.23.2-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 dh-autoreconf all 21+nmu1 [11.7 kB] Fetched 11.7 kB in 0s (210 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgl6il3y4/dh-autoreconf_21+nmu1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libde265-0 riscv64 1.0.16-1+b1 [173 kB] Fetched 173 kB in 0s (2726 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwm3a3a8g/libde265-0_1.0.16-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 mesa-libgallium riscv64 26.0.0-1 [9789 kB] Fetched 9789 kB in 1s (16.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx47l68t3/mesa-libgallium_26.0.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libppix-quotelike-perl all 0.023-1 [74.6 kB] Fetched 74.6 kB in 0s (1297 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjncqd30x/libppix-quotelike-perl_0.023-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 netbase all 6.5 [12.4 kB] Fetched 12.4 kB in 0s (231 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0y28ocl0/netbase_6.5_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-keysyms1 riscv64 0.4.1-1+b1 [16.8 kB] Fetched 16.8 kB in 0s (299 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdpwtb_me/libxcb-keysyms1_0.4.1-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmarkdown2 riscv64 2.2.7-2.1+b1 [35.9 kB] Fetched 35.9 kB in 0s (636 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl5wtt_qx/libmarkdown2_2.2.7-2.1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfile-homedir-perl all 1.006-2 [42.4 kB] Fetched 42.4 kB in 0s (744 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9ylzofee/libfile-homedir-perl_1.006-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libmoox-aliases-perl all 0.001006-2 [7156 B] Fetched 7156 B in 0s (133 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn4o5k7bz/libmoox-aliases-perl_0.001006-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libregexp-pattern-perl all 0.2.14-3 [18.3 kB] Fetched 18.3 kB in 0s (334 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpucbi0bhu/libregexp-pattern-perl_0.2.14-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libharfbuzz0b riscv64 12.3.2-2 [566 kB] Fetched 566 kB in 0s (6673 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8df8bkm9/libharfbuzz0b_12.3.2-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libemail-address-xs-perl riscv64 1.05-1+b3 [29.4 kB] Fetched 29.4 kB in 0s (525 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprxcq5c57/libemail-address-xs-perl_1.05-1+b3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260219T084350Z unstable/main riscv64 libgnutls28-dev riscv64 3.8.12-2 [2899 kB] Fetched 2899 kB in 0s (13.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx_ypcr_c/libgnutls28-dev_3.8.12-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgssapi-krb5-2 riscv64 1.22.1-2 [141 kB] Fetched 141 kB in 0s (2106 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg9q8x1hy/libgssapi-krb5-2_1.22.1-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhdf5-dev riscv64 1.14.6+repack-2 [7343 kB] Fetched 7343 kB in 0s (15.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4k_y1pq8/libhdf5-dev_1.14.6+repack-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libldap2 riscv64 2.6.10+dfsg-1+b1 [196 kB] Fetched 196 kB in 0s (2878 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp1p8exfj/libldap2_2.6.10+dfsg-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libzstd-dev riscv64 1.5.7+dfsg-3+b1 [1653 kB] Fetched 1653 kB in 0s (11.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3npgd9ox/libzstd-dev_1.5.7+dfsg-3+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfile-sharedir-perl all 1.118-3 [16.0 kB] Fetched 16.0 kB in 0s (293 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7ufr_vqd/libfile-sharedir-perl_1.118-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libyaml-pp-perl all 0.39.0-1 [111 kB] Fetched 111 kB in 0s (1837 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_cl69cux/libyaml-pp-perl_0.39.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libumfpack6 riscv64 1:7.12.2+dfsg-1 [262 kB] Fetched 262 kB in 0s (3415 kB/s) dpkg-name: info: moved 'libumfpack6_1%3a7.12.2+dfsg-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpchnveou5/libumfpack6_7.12.2+dfsg-1_riscv64.deb' dpkg-buildpackage: info: source package debootsnap-dummy dpkg-buildpackage: info: source version 1.0 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Equivs Dummy Package Generator dpkg-source --before-build . dpkg-buildpackage: info: host architecture riscv64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/debootsnap-dummy/ dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'debootsnap-dummy' in '../debootsnap-dummy_1.0_all.deb'. dpkg-genbuildinfo --build=binary -O../debootsnap-dummy_1.0_riscv64.buildinfo dpkg-genchanges --build=binary -O../debootsnap-dummy_1.0_riscv64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) The package has been created. Attention, the package has been created in the /srv/rebuilderd/tmp/tmpb9kv0851/cache directory, not in ".." as indicated by the message above! I: automatically chosen mode: unshare I: chroot architecture riscv64 is equal to the host's architecture I: using /srv/rebuilderd/tmp/mmdebstrap.dCKh5d0Kgx as tempdir I: running --setup-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/setup00.sh /srv/rebuilderd/tmp/mmdebstrap.dCKh5d0Kgx 127.0.0.1 - - [22/Mar/2026 14:28:18] code 404, message File not found 127.0.0.1 - - [22/Mar/2026 14:28:18] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:33819 ./ InRelease 127.0.0.1 - - [22/Mar/2026 14:28:18] "GET /./Release HTTP/1.1" 200 - Get:2 http://localhost:33819 ./ Release [462 B] 127.0.0.1 - - [22/Mar/2026 14:28:18] code 404, message File not found 127.0.0.1 - - [22/Mar/2026 14:28:18] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:33819 ./ Release.gpg 127.0.0.1 - - [22/Mar/2026 14:28:18] "GET /./Packages HTTP/1.1" 200 - Get:4 http://localhost:33819 ./ Packages [927 kB] Fetched 928 kB in 0s (4996 kB/s) Reading package lists... usr-is-merged found but not real -- not running merged-usr setup hook I: skipping apt-get update because it was already run I: downloading packages with apt... 127.0.0.1 - - [22/Mar/2026 14:28:19] "GET /./gcc-15-base_15.2.0-13_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [22/Mar/2026 14:28:19] "GET /./libc-gconv-modules-extra_2.42-13_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [22/Mar/2026 14:28:19] "GET /./libc6_2.42-13_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [22/Mar/2026 14:28:19] "GET /./libgcc-s1_15.2.0-13_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [22/Mar/2026 14:28:19] "GET /./mawk_1.3.4.20260129-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [22/Mar/2026 14:28:19] "GET /./base-files_14_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [22/Mar/2026 14:28:19] "GET /./libtinfo6_6.6%2b20251231-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [22/Mar/2026 14:28:19] "GET /./debianutils_5.23.2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [22/Mar/2026 14:28:19] "GET /./bash_5.3-2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [22/Mar/2026 14:28:19] "GET /./libacl1_2.3.2-3_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [22/Mar/2026 14:28:19] "GET /./libattr1_2.5.2-4_riscv64.deb HTTP/1.1" 200 - 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127.0.0.1 - - [22/Mar/2026 14:29:47] "GET /./debootsnap-dummy_1.0_all.deb HTTP/1.1" 200 - I: running --customize-hook directly: /srv/rebuilderd/tmp/tmpb9kv0851/apt_install.sh /srv/rebuilderd/tmp/mmdebstrap.dCKh5d0Kgx Reading package lists... Building dependency tree... Reading state information... libc-dev-bin is already the newest version (2.42-13). libc-dev-bin set to manually installed. libxml-sax-perl is already the newest version (1.02+dfsg-4). libxml-sax-perl set to manually installed. hostname is already the newest version (3.25). libgl-dev is already the newest version (1.7.0-3). libgl-dev set to manually installed. libegl-mesa0 is already the newest version (26.0.0-1). libegl-mesa0 set to manually installed. libavahi-common3 is already the newest version (0.8-18). libavahi-common3 set to manually installed. libconfig-model-dpkg-perl is already the newest version (3.017). libconfig-model-dpkg-perl set to manually installed. t1utils is already the newest version (1.41-4+b1). t1utils set to manually installed. libcdt6 is already the newest version (14.1.2-1). libcdt6 set to manually installed. gcc-riscv64-linux-gnu is already the newest version (4:15.2.0-5). gcc-riscv64-linux-gnu set to manually installed. g++-riscv64-linux-gnu is already the newest version (4:15.2.0-5). g++-riscv64-linux-gnu set to manually installed. libicu76 is already the newest version (76.1-4+b1). libicu76 set to manually installed. libqt6dbus6 is already the newest version (6.9.2+dfsg-4). libqt6dbus6 set to manually installed. zip is already the newest version (3.0-15). zip set to manually installed. python3-dev is already the newest version (3.13.9-3). python3-dev set to manually installed. libx11-dev is already the newest version (2:1.8.12-1+b1). libx11-dev set to manually installed. liblist-utilsby-perl is already the newest version (0.12-2). liblist-utilsby-perl set to manually installed. libgvplugin-pango8 is already the newest version (14.1.2-1). libgvplugin-pango8 set to manually installed. libyaml-tiny-perl is already the newest version (1.76-1). libyaml-tiny-perl set to manually installed. libcpanel-json-xs-perl is already the newest version (4.40-1). libcpanel-json-xs-perl set to manually installed. libtcl8.6 is already the newest version (8.6.17+dfsg-1+b1). libtcl8.6 set to manually installed. debianutils is already the newest version (5.23.2). libxinerama1 is already the newest version (2:1.1.4-3+b5). libxinerama1 set to manually installed. libpython3-stdlib is already the newest version (3.13.9-3). libpython3-stdlib set to manually installed. libkrb5-3 is already the newest version (1.22.1-2). libkrb5-3 set to manually installed. libfeature-compat-try-perl is already the newest version (0.05-1). libfeature-compat-try-perl set to manually installed. libssh2-1t64 is already the newest version (1.11.1-1+b1). libssh2-1t64 set to manually installed. libsoftware-license-perl is already the newest version (0.104007-1). libsoftware-license-perl set to manually installed. libxmlb2 is already the newest version (0.3.24-2). libxmlb2 set to manually installed. libglx-dev is already the newest version (1.7.0-3). libglx-dev set to manually installed. liberror-perl is already the newest version (0.17030-1). liberror-perl set to manually installed. libcurl3t64-gnutls is already the newest version (8.18.0-2). libcurl3t64-gnutls set to manually installed. base-files is already the newest version (14). liblist-moreutils-perl is already the newest version (0.430-2). liblist-moreutils-perl set to manually installed. libxpm4 is already the newest version (1:3.5.17-1+b4). libxpm4 set to manually installed. bsdextrautils is already the newest version (2.41.3-3). bsdextrautils set to manually installed. file is already the newest version (1:5.46-5+b1). file set to manually installed. libnet-http-perl is already the newest version (6.24-1). libnet-http-perl set to manually installed. libctf0 is already the newest version (2.46-1). libctf0 set to manually installed. libimagequant0 is already the newest version (4.4.1-1+b1). libimagequant0 set to manually installed. librole-tiny-perl is already the newest version (2.002004-1). librole-tiny-perl set to manually installed. autotools-dev is already the newest version (20240727.1). autotools-dev set to manually installed. libbrotli1 is already the newest version (1.2.0-3). libbrotli1 set to manually installed. libstemmer0d is already the newest version (3.0.1-1+b1). libstemmer0d set to manually installed. coreutils is already the newest version (9.7-3). autopoint is already the newest version (0.23.2-1). autopoint set to manually installed. libencode-locale-perl is already the newest version (1.05-3). libencode-locale-perl set to manually installed. libmodule-implementation-perl is already the newest version (0.09-2). libmodule-implementation-perl set to manually installed. libxcb-sync1 is already the newest version (1.17.0-2+b2). libxcb-sync1 set to manually installed. libxcb-xkb1 is already the newest version (1.17.0-2+b2). libxcb-xkb1 set to manually installed. libkadm5clnt-mit12 is already the newest version (1.22.1-2). libkadm5clnt-mit12 set to manually installed. libdb5.3t64 is already the newest version (5.3.28+dfsg2-11). ncurses-bin is already the newest version (6.6+20251231-1). mawk is already the newest version (1.3.4.20260129-1). libjson-maybexs-perl is already the newest version (1.004008-1). libjson-maybexs-perl set to manually installed. libxcb-image0 is already the newest version (0.4.0-2+b3). libxcb-image0 set to manually installed. libicu-dev is already the newest version (76.1-4+b1). libicu-dev set to manually installed. libcurl4-openssl-dev is already the newest version (8.18.0-2). libcurl4-openssl-dev set to manually installed. liblog-any-adapter-screen-perl is already the newest version (0.141-2). liblog-any-adapter-screen-perl set to manually installed. libnet-domain-tld-perl is already the newest version (1.75-4). libnet-domain-tld-perl set to manually installed. libngtcp2-crypto-gnutls8 is already the newest version (1.16.0-1). libngtcp2-crypto-gnutls8 set to manually installed. libhttp-message-perl is already the newest version (7.01-1). libhttp-message-perl set to manually installed. libxcursor1 is already the newest version (1:1.2.3-1+b1). libxcursor1 set to manually installed. liblwp-mediatypes-perl is already the newest version (6.04-2). liblwp-mediatypes-perl set to manually installed. libpam-modules-bin is already the newest version (1.7.0-5+b1). libisl23 is already the newest version (0.27-1+b1). libisl23 set to manually installed. gcc-15-base is already the newest version (15.2.0-13). perl is already the newest version (5.40.1-7). perl set to manually installed. libglx-mesa0 is already the newest version (26.0.0-1). libglx-mesa0 set to manually installed. libxml-libxml-perl is already the newest version (2.0207+dfsg+really+2.0134-7). libxml-libxml-perl set to manually installed. java-common is already the newest version (0.76). java-common set to manually installed. libqt6openglwidgets6 is already the newest version (6.9.2+dfsg-4). libqt6openglwidgets6 set to manually installed. libpsl5t64 is already the newest version (0.21.2-1.1+b2). libpsl5t64 set to manually installed. libpod-constants-perl is already the newest version (0.19-2). libpod-constants-perl set to manually installed. libarray-intspan-perl is already the newest version (2.004-2). libarray-intspan-perl set to manually installed. libvariable-magic-perl is already the newest version (0.64-1+b1). libvariable-magic-perl set to manually installed. libgl1 is already the newest version (1.7.0-3). libgl1 set to manually installed. libalgorithm-c3-perl is already the newest version (0.11-2). libalgorithm-c3-perl set to manually installed. libfontconfig1 is already the newest version (2.17.1-5). libfontconfig1 set to manually installed. openssl is already the newest version (3.5.5-1). openssl set to manually installed. automake is already the newest version (1:1.18.1-3). automake set to manually installed. libxs-parse-keyword-perl is already the newest version (0.49-1). libxs-parse-keyword-perl set to manually installed. libdevel-callchecker-perl is already the newest version (0.009-3). libdevel-callchecker-perl set to manually installed. libcholmod5 is already the newest version (1:7.12.2+dfsg-1). libcholmod5 set to manually installed. libtasn1-6 is already the newest version (4.21.0-2). libtasn1-6 set to manually installed. libcxsparse4 is already the newest version (1:7.12.2+dfsg-1). libcxsparse4 set to manually installed. tar is already the newest version (1.35+dfsg-3.1). libxcb1-dev is already the newest version (1.17.0-2+b2). libxcb1-dev set to manually installed. libproc2-0 is already the newest version (2:4.0.4-9+b1). libproc2-0 set to manually installed. libsframe3 is already the newest version (2.46-1). libsframe3 set to manually installed. libmodule-pluggable-perl is already the newest version (5.2-5). libmodule-pluggable-perl set to manually installed. fontconfig is already the newest version (2.17.1-5). fontconfig set to manually installed. libnss3 is already the newest version (2:3.120-1). libnss3 set to manually installed. libfile-libmagic-perl is already the newest version (1.23-2+b2). libfile-libmagic-perl set to manually installed. libvorbis0a is already the newest version (1.3.7-3+b1). libvorbis0a set to manually installed. libdav1d7 is already the newest version (1.5.3-1+b1). libdav1d7 set to manually installed. libxmuu1 is already the newest version (2:1.1.3-4). libxmuu1 set to manually installed. libidn2-dev is already the newest version (2.3.8-4+b1). libidn2-dev set to manually installed. libinput-bin is already the newest version (1.31.0-1). libinput-bin set to manually installed. libnet-netmask-perl is already the newest version (2.0003-1). libnet-netmask-perl set to manually installed. libreadline8t64 is already the newest version (8.3-4). libreadline8t64 set to manually installed. libfribidi0 is already the newest version (1.0.16-5). libfribidi0 set to manually installed. libwebpmux3 is already the newest version (1.5.0-0.1+b1). libwebpmux3 set to manually installed. libwww-perl is already the newest version (6.81-1). libwww-perl set to manually installed. dwz is already the newest version (0.16-2). dwz set to manually installed. libberkeleydb-perl is already the newest version (0.66-2). libberkeleydb-perl set to manually installed. libsamplerate0 is already the newest version (0.2.2-4+b3). libsamplerate0 set to manually installed. libconfig-tiny-perl is already the newest version (2.30-1). libconfig-tiny-perl set to manually installed. binutils is already the newest version (2.46-1). binutils set to manually installed. libp11-kit0 is already the newest version (0.25.10-1+b1). libp11-kit0 set to manually installed. libjxl0.11 is already the newest version (0.11.1-6). libjxl0.11 set to manually installed. libjpeg62-turbo is already the newest version (1:2.1.5-4). libjpeg62-turbo set to manually installed. librhash1 is already the newest version (1.4.6-1.1). librhash1 set to manually installed. libxcb-randr0 is already the newest version (1.17.0-2+b2). libxcb-randr0 set to manually installed. libdata-dpath-perl is already the newest version (0.60-1). libdata-dpath-perl set to manually installed. nettle-dev is already the newest version (3.10.2-1). nettle-dev set to manually installed. ncurses-base is already the newest version (6.6+20251231-1). libxml-namespacesupport-perl is already the newest version (1.12-2). libxml-namespacesupport-perl set to manually installed. libevdev2 is already the newest version (1.13.6+dfsg-1). libevdev2 set to manually installed. libkrb5-dev is already the newest version (1.22.1-2). libkrb5-dev set to manually installed. libbinutils is already the newest version (2.46-1). libbinutils set to manually installed. libstring-rewriteprefix-perl is already the newest version (0.009-1). libstring-rewriteprefix-perl set to manually installed. libtext-levenshtein-damerau-perl is already the newest version (0.41-3). libtext-levenshtein-damerau-perl set to manually installed. libxcb-dri3-0 is already the newest version (1.17.0-2+b2). libxcb-dri3-0 set to manually installed. gnuplot-nox is already the newest version (6.0.3+dfsg1-1). gnuplot-nox set to manually installed. libsoftware-copyright-perl is already the newest version (0.015-1). libsoftware-copyright-perl set to manually installed. libqt6xml6 is already the newest version (6.9.2+dfsg-4). libqt6xml6 set to manually installed. linux-libc-dev is already the newest version (6.18.12-1). linux-libc-dev set to manually installed. libclass-tiny-perl is already the newest version (1.008-2). libclass-tiny-perl set to manually installed. libcapture-tiny-perl is already the newest version (0.50-1). libcapture-tiny-perl set to manually installed. libctf-nobfd0 is already the newest version (2.46-1). libctf-nobfd0 set to manually installed. libdevel-stacktrace-perl is already the newest version (2.0500-1). libdevel-stacktrace-perl set to manually installed. libclass-c3-perl is already the newest version (0.35-2). libclass-c3-perl set to manually installed. libelf1t64 is already the newest version (0.194-1). libelf1t64 set to manually installed. libevent-2.1-7t64 is already the newest version (2.1.12-stable-10+b2). libevent-2.1-7t64 set to manually installed. libarchive-zip-perl is already the newest version (1.68-1). libarchive-zip-perl set to manually installed. libipc-run3-perl is already the newest version (0.049-1). libipc-run3-perl set to manually installed. m4 is already the newest version (1.4.21-1). m4 set to manually installed. libgprofng0 is already the newest version (2.46-1). libgprofng0 set to manually installed. libpkgconf7 is already the newest version (2.5.1-4). libpkgconf7 set to manually installed. libgav1-2 is already the newest version (0.20.0-2). libgav1-2 set to manually installed. libaom3 is already the newest version (3.13.1-2). libaom3 set to manually installed. libglvnd0 is already the newest version (1.7.0-3). libglvnd0 set to manually installed. swig is already the newest version (4.4.0-1). swig set to manually installed. libconst-fast-perl is already the newest version (0.014-2). libconst-fast-perl set to manually installed. libdebhelper-perl is already the newest version (13.30). libdebhelper-perl set to manually installed. libarchive13t64 is already the newest version (3.8.5-1). libarchive13t64 set to manually installed. libfftw3-bin is already the newest version (3.3.10-2+b2). libfftw3-bin set to manually installed. libsm6 is already the newest version (2:1.2.6-1+b1). libsm6 set to manually installed. libx11-6 is already the newest version (2:1.8.12-1+b1). libx11-6 set to manually installed. libfile-find-rule-perl is already the newest version (0.35-1). libfile-find-rule-perl set to manually installed. dpkg-dev is already the newest version (1.23.5). dpkg-dev set to manually installed. libxdot4 is already the newest version (14.1.2-1). libxdot4 set to manually installed. tzdata is already the newest version (2025c-3). tzdata set to manually installed. libmount1 is already the newest version (2.41.3-3). libparse-debcontrol-perl is already the newest version (2.005-6). libparse-debcontrol-perl set to manually installed. libclang-cpp21 is already the newest version (1:21.1.8-3). libclang-cpp21 set to manually installed. libamd3 is already the newest version (1:7.12.2+dfsg-1). libamd3 set to manually installed. libasan8 is already the newest version (15.2.0-13). libasan8 set to manually installed. libnumber-compare-perl is already the newest version (0.03-3). libnumber-compare-perl set to manually installed. libsoftware-licensemoreutils-perl is already the newest version (1.009-1). libsoftware-licensemoreutils-perl set to manually installed. perl-modules-5.40 is already the newest version (5.40.1-7). perl-modules-5.40 set to manually installed. libhash-merge-perl is already the newest version (0.302-1). libhash-merge-perl set to manually installed. libsafe-isa-perl is already the newest version (1.000010-1). libsafe-isa-perl set to manually installed. libimport-into-perl is already the newest version (1.002005-2). libimport-into-perl set to manually installed. libksba8 is already the newest version (1.6.7-2+b2). libksba8 set to manually installed. libp11-kit-dev is already the newest version (0.25.10-1+b1). libp11-kit-dev set to manually installed. libfyaml0 is already the newest version (0.9.4-1). libfyaml0 set to manually installed. libxft2 is already the newest version (2.3.6-1+b5). libxft2 set to manually installed. libxcb-glx0 is already the newest version (1.17.0-2+b2). libxcb-glx0 set to manually installed. libmodule-runtime-perl is already the newest version (0.018-1). libmodule-runtime-perl set to manually installed. perl-openssl-defaults is already the newest version (7+b2). perl-openssl-defaults set to manually installed. libcolamd3 is already the newest version (1:7.12.2+dfsg-1). libcolamd3 set to manually installed. libxrender1 is already the newest version (1:0.9.12-1+b1). libxrender1 set to manually installed. libxml-sax-base-perl is already the newest version (1.09-3). libxml-sax-base-perl set to manually installed. libcairo2 is already the newest version (1.18.4-3). libcairo2 set to manually installed. libpath-iterator-rule-perl is already the newest version (1.015-2). libpath-iterator-rule-perl set to manually installed. libnghttp3-9 is already the newest version (1.12.0-1). libnghttp3-9 set to manually installed. patchutils is already the newest version (0.4.3-1). patchutils set to manually installed. libuuid1 is already the newest version (2.41.3-3). xdg-utils is already the newest version (1.2.1-2). xdg-utils set to manually installed. libapp-cmd-perl is already the newest version (0.338-1). libapp-cmd-perl set to manually installed. libdrm-amdgpu1 is already the newest version (2.4.131-1). libdrm-amdgpu1 set to manually installed. libpam-modules is already the newest version (1.7.0-5+b1). cmake-data is already the newest version (4.2.3-2). cmake-data set to manually installed. groff-base is already the newest version (1.23.0-10). groff-base set to manually installed. libattr1 is already the newest version (1:2.5.2-4). libterm-readkey-perl is already the newest version (2.38-2+b3). libterm-readkey-perl set to manually installed. libcgi-pm-perl is already the newest version (4.71-1). libcgi-pm-perl set to manually installed. gpg is already the newest version (2.4.8-5). gpg set to manually installed. libsz2 is already the newest version (1.1.5-1). libsz2 set to manually installed. default-jdk-headless is already the newest version (2:1.21-76). default-jdk-headless set to manually installed. libaec0 is already the newest version (1.1.5-1). libaec0 set to manually installed. libhdf5-hl-fortran-310 is already the newest version (1.14.6+repack-2). libhdf5-hl-fortran-310 set to manually installed. libk5crypto3 is already the newest version (1.22.1-2). libk5crypto3 set to manually installed. libncurses6 is already the newest version (6.6+20251231-1). libncurses6 set to manually installed. libqscintilla2-qt6-15 is already the newest version (2.14.1+dfsg-2). libqscintilla2-qt6-15 set to manually installed. libdata-section-perl is already the newest version (0.200008-1). libdata-section-perl set to manually installed. libtimedate-perl is already the newest version (2.3300-2). libtimedate-perl set to manually installed. diffutils is already the newest version (1:3.12-1). python3-minimal is already the newest version (3.13.9-3). python3-minimal set to manually installed. aglfn is already the newest version (1.7+git20191031.4036a9c-2). aglfn set to manually installed. libiterator-perl is already the newest version (0.03+ds1-2). libiterator-perl set to manually installed. libstdc++6 is already the newest version (15.2.0-13). libstdc++6 set to manually installed. libgnutls30t64 is already the newest version (3.8.12-2). libgnutls30t64 set to manually installed. libxxf86vm1 is already the newest version (1:1.1.4-2). libxxf86vm1 set to manually installed. libconfig-inifiles-perl is already the newest version (3.000003-4). libconfig-inifiles-perl set to manually installed. libio-html-perl is already the newest version (1.004-3). libio-html-perl set to manually installed. libyaml-libyaml-perl is already the newest version (0.904.0+ds-1). libyaml-libyaml-perl set to manually installed. python3.13 is already the newest version (3.13.12-1). python3.13 set to manually installed. libpipeline1 is already the newest version (1.5.8-2). libpipeline1 set to manually installed. perl-base is already the newest version (5.40.1-7). liblapack3 is already the newest version (3.12.1-7+b1). liblapack3 set to manually installed. libpython3-dev is already the newest version (3.13.9-3). libpython3-dev set to manually installed. xtrans-dev is already the newest version (1.6.0-1). xtrans-dev set to manually installed. libdbus-1-3 is already the newest version (1.16.2-3). libdbus-1-3 set to manually installed. libnghttp2-14 is already the newest version (1.68.0-1). libnghttp2-14 set to manually installed. libtirpc3t64 is already the newest version (1.3.6+ds-1). libtirpc3t64 set to manually installed. readline-common is already the newest version (8.3-4). readline-common set to manually installed. libfeature-compat-class-perl is already the newest version (0.08-1). libfeature-compat-class-perl set to manually installed. libtext-unidecode-perl is already the newest version (1.30-3). libtext-unidecode-perl set to manually installed. libxml2-16 is already the newest version (2.15.1+dfsg-2+b1). libxml2-16 set to manually installed. libpam0g is already the newest version (1.7.0-5+b1). libsort-versions-perl is already the newest version (1.62-3). libsort-versions-perl set to manually installed. libmtdev1t64 is already the newest version (1.1.7-1+b1). libmtdev1t64 set to manually installed. libtext-levenshteinxs-perl is already the newest version (0.03-5+b3). libtext-levenshteinxs-perl set to manually installed. libqt6widgets6 is already the newest version (6.9.2+dfsg-4). libqt6widgets6 set to manually installed. libhtml-form-perl is already the newest version (6.13-1). libhtml-form-perl set to manually installed. libsereal-decoder-perl is already the newest version (5.004+ds-1+b4). libsereal-decoder-perl set to manually installed. libpython3.13-dev is already the newest version (3.13.12-1). libpython3.13-dev set to manually installed. appstream is already the newest version (1.1.2-1). appstream set to manually installed. libdouble-conversion3 is already the newest version (3.4.0-1). libdouble-conversion3 set to manually installed. libxcb-util1 is already the newest version (0.4.1-1+b1). libxcb-util1 set to manually installed. libstring-copyright-perl is already the newest version (0.003014-1). libstring-copyright-perl set to manually installed. libperl5.40 is already the newest version (5.40.1-7). libperl5.40 set to manually installed. libc6-dev is already the newest version (2.42-13). libc6-dev set to manually installed. libio-string-perl is already the newest version (1.08-4). libio-string-perl set to manually installed. diffstat is already the newest version (1.68-1). diffstat set to manually installed. libgcc-s1 is already the newest version (15.2.0-13). libgnutls-openssl27t64 is already the newest version (3.8.12-2). libgnutls-openssl27t64 set to manually installed. libqt6opengl6 is already the newest version (6.9.2+dfsg-4). libqt6opengl6 set to manually installed. libtoml-tiny-perl is already the newest version (0.20-1). libtoml-tiny-perl set to manually installed. libxfixes3 is already the newest version (1:6.0.0-2+b5). libxfixes3 set to manually installed. libhogweed6t64 is already the newest version (3.10.2-1). libhogweed6t64 set to manually installed. procps is already the newest version (2:4.0.4-9+b1). procps set to manually installed. libbsd0 is already the newest version (0.12.2-2+b1). libbsd0 set to manually installed. libjansson4 is already the newest version (2.14-2+b4). libjansson4 set to manually installed. libcap-ng0 is already the newest version (0.8.5-4+b2). libgssrpc4t64 is already the newest version (1.22.1-2). libgssrpc4t64 set to manually installed. libice6 is already the newest version (2:1.1.1-1+b1). libice6 set to manually installed. libtiff6 is already the newest version (4.7.1-1). libtiff6 set to manually installed. graphviz is already the newest version (14.1.2-1). graphviz set to manually installed. liblzma5 is already the newest version (5.8.2-2). xz-utils is already the newest version (5.8.2-2). xz-utils set to manually installed. ca-certificates is already the newest version (20250419). ca-certificates set to manually installed. libnamespace-clean-perl is already the newest version (0.27-2). libnamespace-clean-perl set to manually installed. libreadline-dev is already the newest version (8.3-4). libreadline-dev set to manually installed. libb-hooks-endofscope-perl is already the newest version (0.28-2). libb-hooks-endofscope-perl set to manually installed. libbrotli-dev is already the newest version (1.2.0-3). libbrotli-dev set to manually installed. libdevel-size-perl is already the newest version (0.86-1). libdevel-size-perl set to manually installed. libblkid1 is already the newest version (2.41.3-3). libapt-pkg-perl is already the newest version (0.1.43). libapt-pkg-perl set to manually installed. libb-keywords-perl is already the newest version (1.29-1). libb-keywords-perl set to manually installed. octave is already the newest version (10.3.0-3). octave set to manually installed. libpng-dev is already the newest version (1.6.55-1). libpng-dev set to manually installed. libtext-wrapi18n-perl is already the newest version (0.06-10). libtext-wrapi18n-perl set to manually installed. liblcms2-2 is already the newest version (2.17-1). liblcms2-2 set to manually installed. libxdmcp-dev is already the newest version (1:1.1.5-2). libxdmcp-dev set to manually installed. libvulkan1 is already the newest version (1.4.341.0-1). libvulkan1 set to manually installed. lzop is already the newest version (1.04-2+b1). lzop set to manually installed. libmpfr6 is already the newest version (4.2.2-2+b1). libmpfr6 set to manually installed. libxcb-xfixes0 is already the newest version (1.17.0-2+b2). libxcb-xfixes0 set to manually installed. libparams-validate-perl is already the newest version (1.31-2+b4). libparams-validate-perl set to manually installed. libpython3.13 is already the newest version (3.13.12-1). libpython3.13 set to manually installed. libxcb-present0 is already the newest version (1.17.0-2+b2). libxcb-present0 set to manually installed. libaudit1 is already the newest version (1:4.1.2-1+b1). libgcrypt20 is already the newest version (1.11.2-3+b1). libgcrypt20 set to manually installed. libxdmcp6 is already the newest version (1:1.1.5-2). libxdmcp6 set to manually installed. libpcre2-16-0 is already the newest version (10.46-1+b1). libpcre2-16-0 set to manually installed. libfftw3-single3 is already the newest version (3.3.10-2+b2). libfftw3-single3 set to manually installed. autoconf is already the newest version (2.72-3.1). autoconf set to manually installed. libdatrie1 is already the newest version (0.2.14-1). libdatrie1 set to manually installed. libfile-stripnondeterminism-perl is already the newest version (1.15.0-1). libfile-stripnondeterminism-perl set to manually installed. perltidy is already the newest version (20250105-1). perltidy set to manually installed. python3.13-dev is already the newest version (3.13.12-1). python3.13-dev set to manually installed. libmagic-mgc is already the newest version (1:5.46-5+b1). libmagic-mgc set to manually installed. r-base-dev is already the newest version (4.5.2-1). r-base-dev set to manually installed. libsub-quote-perl is already the newest version (2.006009-1). libsub-quote-perl set to manually installed. libavahi-client3 is already the newest version (0.8-18). libavahi-client3 set to manually installed. libgcc-15-dev is already the newest version (15.2.0-13). libgcc-15-dev set to manually installed. libgdbm6t64 is already the newest version (1.26-1+b1). libgdbm6t64 set to manually installed. libitm1 is already the newest version (15.2.0-13). libitm1 set to manually installed. libmd4c0 is already the newest version (0.5.2-2+b2). libmd4c0 set to manually installed. libqt6printsupport6 is already the newest version (6.9.2+dfsg-4). libqt6printsupport6 set to manually installed. rdfind is already the newest version (1.6.0-1+b2). rdfind set to manually installed. libtasn1-6-dev is already the newest version (4.21.0-2). libtasn1-6-dev set to manually installed. libproc-processtable-perl is already the newest version (0.637-1+b1). libproc-processtable-perl set to manually installed. libtsan2 is already the newest version (15.2.0-13). libtsan2 set to manually installed. libgudev-1.0-0 is already the newest version (238-7+b1). libgudev-1.0-0 set to manually installed. liblist-moreutils-xs-perl is already the newest version (0.430-4+b2). liblist-moreutils-xs-perl set to manually installed. libtext-reform-perl is already the newest version (1.20-5). libtext-reform-perl set to manually installed. libindirect-perl is already the newest version (0.39-2+b3). libindirect-perl set to manually installed. python3 is already the newest version (3.13.9-3). python3 set to manually installed. libaec-dev is already the newest version (1.1.5-1). libaec-dev set to manually installed. libclass-load-perl is already the newest version (0.25-2). libclass-load-perl set to manually installed. libobject-pad-perl is already the newest version (0.823-2). libobject-pad-perl set to manually installed. libdata-optlist-perl is already the newest version (0.114-1). libdata-optlist-perl set to manually installed. dh-strip-nondeterminism is already the newest version (1.15.0-1). dh-strip-nondeterminism set to manually installed. cpp-15-riscv64-linux-gnu is already the newest version (15.2.0-13). cpp-15-riscv64-linux-gnu set to manually installed. libpaper-utils is already the newest version (2.2.5-0.3+b3). libpaper-utils set to manually installed. libaliased-perl is already the newest version (0.34-3). libaliased-perl set to manually installed. xorg-sgml-doctools is already the newest version (1:1.11-1.1). xorg-sgml-doctools set to manually installed. libtry-tiny-perl is already the newest version (0.32-1). libtry-tiny-perl set to manually installed. openssl-provider-legacy is already the newest version (3.5.5-1). libparse-recdescent-perl is already the newest version (1.967015+dfsg-4). libparse-recdescent-perl set to manually installed. libssh2-1-dev is already the newest version (1.11.1-1+b1). libssh2-1-dev set to manually installed. libsharpyuv0 is already the newest version (1.5.0-0.1+b1). libsharpyuv0 set to manually installed. libconfig-model-backend-yaml-perl is already the newest version (2.134-2). libconfig-model-backend-yaml-perl set to manually installed. libsensors-config is already the newest version (1:3.6.2-2). libsensors-config set to manually installed. libxcb-xinput0 is already the newest version (1.17.0-2+b2). libxcb-xinput0 set to manually installed. libjs-jquery-ui-theme-base is already the newest version (1.14.1+dfsg-1). libjs-jquery-ui-theme-base set to manually installed. libhtml-tokeparser-simple-perl is already the newest version (3.16-4). libhtml-tokeparser-simple-perl set to manually installed. libflac14 is already the newest version (1.5.0+ds-5). libflac14 set to manually installed. make is already the newest version (4.4.1-3). make set to manually installed. libcarp-assert-more-perl is already the newest version (2.9.0-1). libcarp-assert-more-perl set to manually installed. xauth is already the newest version (1:1.1.2-1.1). xauth set to manually installed. gzip is already the newest version (1.13-1). libsubunit0 is already the newest version (1.4.4+1-1). libsubunit0 set to manually installed. libunistring5 is already the newest version (1.3-2+b1). libunistring5 set to manually installed. libspdlog1.15 is already the newest version (1:1.15.3+ds-1+b1). libspdlog1.15 set to manually installed. libfmt10 is already the newest version (10.1.1+ds1-4+b1). libfmt10 set to manually installed. libuchardet0 is already the newest version (0.0.8-2+b1). libuchardet0 set to manually installed. plzip is already the newest version (1.13~rc1-3). plzip set to manually installed. libsasl2-modules-db is already the newest version (2.1.28+dfsg1-10). libsasl2-modules-db set to manually installed. libclang1-21 is already the newest version (1:21.1.8-3). libclang1-21 set to manually installed. libbz2-1.0 is already the newest version (1.0.8-6+b1). libdpkg-perl is already the newest version (1.23.5). libdpkg-perl set to manually installed. libexporter-lite-perl is already the newest version (0.09-2). libexporter-lite-perl set to manually installed. libclone-choose-perl is already the newest version (0.010-2). libclone-choose-perl set to manually installed. libwww-robotrules-perl is already the newest version (6.02-1). libwww-robotrules-perl set to manually installed. grep is already the newest version (3.12-1). libgmp10 is already the newest version (2:6.3.0+dfsg-5+b1). libhttp-negotiate-perl is already the newest version (6.01-2). libhttp-negotiate-perl set to manually installed. libportaudio2 is already the newest version (19.7.0-1). libportaudio2 set to manually installed. libhttp-date-perl is already the newest version (6.06-1). libhttp-date-perl set to manually installed. liblapack-dev is already the newest version (3.12.1-7+b1). liblapack-dev set to manually installed. libabsl20240722 is already the newest version (20240722.0-4). libabsl20240722 set to manually installed. libglpk40 is already the newest version (5.0-2+b1). libglpk40 set to manually installed. build-essential is already the newest version (12.12). build-essential set to manually installed. libinput10 is already the newest version (1.31.0-1). libinput10 set to manually installed. ucf is already the newest version (3.0052). ucf set to manually installed. libunbound8 is already the newest version (1.24.2-1). libunbound8 set to manually installed. intltool-debian is already the newest version (0.35.0+20060710.6). intltool-debian set to manually installed. libxt6t64 is already the newest version (1:1.2.1-1.3+b1). libxt6t64 set to manually installed. dh-octave is already the newest version (1.14.1). dh-octave set to manually installed. libmp3lame0 is already the newest version (3.101~svn6525+dfsg-2). libmp3lame0 set to manually installed. libmoo-perl is already the newest version (2.005005-1). libmoo-perl set to manually installed. libmpg123-0t64 is already the newest version (1.33.3-2). libmpg123-0t64 set to manually installed. libarpack2t64 is already the newest version (3.9.1-6+b1). libarpack2t64 set to manually installed. libpango-1.0-0 is already the newest version (1.57.0-1). libpango-1.0-0 set to manually installed. sysvinit-utils is already the newest version (3.15-6). libqrupdate1 is already the newest version (1.1.5-3). libqrupdate1 set to manually installed. libyaml-0-2 is already the newest version (0.2.5-2+b1). libyaml-0-2 set to manually installed. libldap-dev is already the newest version (2.6.10+dfsg-1+b1). libldap-dev set to manually installed. libmailtools-perl is already the newest version (2.22-1). libmailtools-perl set to manually installed. libgd3 is already the newest version (2.3.3-13+b1). libgd3 set to manually installed. libperlio-utf8-strict-perl is already the newest version (0.010-1+b3). libperlio-utf8-strict-perl set to manually installed. libpathplan4 is already the newest version (14.1.2-1). libpathplan4 set to manually installed. libnettle8t64 is already the newest version (3.10.2-1). libnettle8t64 set to manually installed. fonts-freefont-otf is already the newest version (20211204+svn4273-4). fonts-freefont-otf set to manually installed. bzip2 is already the newest version (1.0.8-6+b1). bzip2 set to manually installed. libts0t64 is already the newest version (1.22-1.1+b2). libts0t64 set to manually installed. libblas3 is already the newest version (3.12.1-7+b1). libblas3 set to manually installed. patch is already the newest version (2.8-2). patch set to manually installed. libdrm-common is already the newest version (2.4.131-1). libdrm-common set to manually installed. libstring-license-perl is already the newest version (0.0.11-1). libstring-license-perl set to manually installed. libheif1 is already the newest version (1.21.2-2). libheif1 set to manually installed. libgbm1 is already the newest version (26.0.0-1). libgbm1 set to manually installed. libfltk-gl1.3t64 is already the newest version (1.3.11-3). libfltk-gl1.3t64 set to manually installed. libfreetype6 is already the newest version (2.14.1+dfsg-2). libfreetype6 set to manually installed. libxcb-shm0 is already the newest version (1.17.0-2+b2). libxcb-shm0 set to manually installed. gnuplot-data is already the newest version (6.0.3+dfsg1-1). gnuplot-data set to manually installed. libgraphite2-3 is already the newest version (1.3.14-11+b1). libgraphite2-3 set to manually installed. liblwp-protocol-https-perl is already the newest version (6.14-1). liblwp-protocol-https-perl set to manually installed. libopengl0 is already the newest version (1.7.0-3). libopengl0 set to manually installed. libkrb5support0 is already the newest version (1.22.1-2). libkrb5support0 set to manually installed. libcrypt1 is already the newest version (1:4.5.1-1). bash is already the newest version (5.3-2). libbz2-dev is already the newest version (1.0.8-6+b1). libbz2-dev set to manually installed. libqt6core5compat6 is already the newest version (6.9.2-3). libqt6core5compat6 set to manually installed. libubsan1 is already the newest version (15.2.0-13). libubsan1 set to manually installed. libclass-xsaccessor-perl is already the newest version (1.19-4+b4). libclass-xsaccessor-perl set to manually installed. libnspr4 is already the newest version (2:4.38.2-1). libnspr4 set to manually installed. libjbig0 is already the newest version (2.1-6.1+b3). libjbig0 set to manually installed. libxcb-cursor0 is already the newest version (0.1.6-1). libxcb-cursor0 set to manually installed. libxkbcommon-x11-0 is already the newest version (1.13.1-1). libxkbcommon-x11-0 set to manually installed. libncursesw6 is already the newest version (6.6+20251231-1). libncursesw6 set to manually installed. gfortran is already the newest version (4:15.2.0-5). gfortran set to manually installed. fontconfig-config is already the newest version (2.17.1-5). fontconfig-config set to manually installed. check is already the newest version (0.15.2-3). check set to manually installed. libregexp-pattern-license-perl is already the newest version (3.11.2-1). libregexp-pattern-license-perl set to manually installed. iso-codes is already the newest version (4.20.1-1). iso-codes set to manually installed. libpixman-1-0 is already the newest version (0.46.4-1+b1). libpixman-1-0 set to manually installed. libfont-ttf-perl is already the newest version (1.06-2). libfont-ttf-perl set to manually installed. libsub-name-perl is already the newest version (0.28-1+b1). libsub-name-perl set to manually installed. libstring-escape-perl is already the newest version (2010.002-3). libstring-escape-perl set to manually installed. libxkbcommon0 is already the newest version (1.13.1-1). libxkbcommon0 set to manually installed. libcc1-0 is already the newest version (15.2.0-13). libcc1-0 set to manually installed. libsub-identify-perl is already the newest version (0.14-4). libsub-identify-perl set to manually installed. tex-common is already the newest version (6.20). tex-common set to manually installed. libmldbm-perl is already the newest version (2.05-4). libmldbm-perl set to manually installed. libhtml-parser-perl is already the newest version (3.83-1+b3). libhtml-parser-perl set to manually installed. libsub-install-perl is already the newest version (0.929-1). libsub-install-perl set to manually installed. openjdk-21-doc is already the newest version (21.0.10+7-1). openjdk-21-doc set to manually installed. libqscintilla2-qt6-l10n is already the newest version (2.14.1+dfsg-2). libqscintilla2-qt6-l10n set to manually installed. libperl-dev is already the newest version (5.40.1-7). libperl-dev set to manually installed. libjpeg62-turbo-dev is already the newest version (1:2.1.5-4). libjpeg62-turbo-dev set to manually installed. libio-stringy-perl is already the newest version (2.113-2). libio-stringy-perl set to manually installed. libsub-exporter-progressive-perl is already the newest version (0.001013-3). libsub-exporter-progressive-perl set to manually installed. po-debconf is already the newest version (1.0.22). po-debconf set to manually installed. libfile-which-perl is already the newest version (1.27-2). libfile-which-perl set to manually installed. libkdb5-10t64 is already the newest version (1.22.1-2). libkdb5-10t64 set to manually installed. libstrictures-perl is already the newest version (2.000006-1). libstrictures-perl set to manually installed. libgmp-dev is already the newest version (2:6.3.0+dfsg-5+b1). libgmp-dev set to manually installed. libidn2-0 is already the newest version (2.3.8-4+b1). libidn2-0 set to manually installed. texinfo is already the newest version (7.2-5). texinfo set to manually installed. libio-interactive-perl is already the newest version (1.027-1). libio-interactive-perl set to manually installed. libfltk1.3t64 is already the newest version (1.3.11-3). libfltk1.3t64 set to manually installed. libgl2ps1.4 is already the newest version (1.4.2+dfsg1-4). libgl2ps1.4 set to manually installed. libwebp7 is already the newest version (1.5.0-0.1+b1). libwebp7 set to manually installed. libtext-xslate-perl is already the newest version (3.5.9-2+b2). libtext-xslate-perl set to manually installed. libgnutls-dane0t64 is already the newest version (3.8.12-2). libgnutls-dane0t64 set to manually installed. libclass-inspector-perl is already the newest version (1.36-3). libclass-inspector-perl set to manually installed. libsystemd0 is already the newest version (259.1-1). libglu1-mesa is already the newest version (9.0.2-1.1+b4). libglu1-mesa set to manually installed. libx11-data is already the newest version (2:1.8.12-1). libx11-data set to manually installed. libsensors5 is already the newest version (1:3.6.2-2+b1). libsensors5 set to manually installed. libthai-data is already the newest version (0.1.30-1). libthai-data set to manually installed. libheif-plugin-dav1d is already the newest version (1.21.2-2). libheif-plugin-dav1d set to manually installed. util-linux is already the newest version (2.41.3-3). libllvm21 is already the newest version (1:21.1.8-3). libllvm21 set to manually installed. libhtml-tree-perl is already the newest version (5.07-3). libhtml-tree-perl set to manually installed. lintian is already the newest version (2.129.0). lintian set to manually installed. libnghttp2-dev is already the newest version (1.68.0-1). libnghttp2-dev set to manually installed. liblist-compare-perl is already the newest version (0.55-2). liblist-compare-perl set to manually installed. debhelper is already the newest version (13.30). debhelper set to manually installed. libpackage-stash-perl is already the newest version (0.40-1). libpackage-stash-perl set to manually installed. libffi8 is already the newest version (3.5.2-3+b1). libffi8 set to manually installed. zlib1g-dev is already the newest version (1:1.3.dfsg+really1.3.1-3). zlib1g-dev set to manually installed. libacl1 is already the newest version (2.3.2-3). libcom-err2 is already the newest version (1.47.2-3+b8). libcom-err2 set to manually installed. libnetaddr-ip-perl is already the newest version (4.079+dfsg-2+b4). libnetaddr-ip-perl set to manually installed. libcrypt-dev is already the newest version (1:4.5.1-1). libcrypt-dev set to manually installed. libsyntax-keyword-try-perl is already the newest version (0.31-1). libsyntax-keyword-try-perl set to manually installed. libtirpc-dev is already the newest version (1.3.6+ds-1). libtirpc-dev set to manually installed. libio-socket-ssl-perl is already the newest version (2.098-1). libio-socket-ssl-perl set to manually installed. libavahi-common-data is already the newest version (0.8-18). libavahi-common-data set to manually installed. libnghttp3-dev is already the newest version (1.12.0-1). libnghttp3-dev set to manually installed. libpaper2 is already the newest version (2.2.5-0.3+b3). libpaper2 set to manually installed. libpcsclite1 is already the newest version (2.4.1-1). libpcsclite1 set to manually installed. libedit2 is already the newest version (3.1-20251016-1). libedit2 set to manually installed. gfortran-15-riscv64-linux-gnu is already the newest version (15.2.0-13). gfortran-15-riscv64-linux-gnu set to manually installed. libio-tiecombine-perl is already the newest version (1.005-3). libio-tiecombine-perl set to manually installed. libz3-4 is already the newest version (4.13.3-1+b1). libz3-4 set to manually installed. libmouse-perl is already the newest version (2.6.1-1). libmouse-perl set to manually installed. libudev1 is already the newest version (259.1-1). g++-15-riscv64-linux-gnu is already the newest version (15.2.0-13). g++-15-riscv64-linux-gnu set to manually installed. binutils-common is already the newest version (2.46-1). binutils-common set to manually installed. libtext-glob-perl is already the newest version (0.11-3). libtext-glob-perl set to manually installed. dh-octave-autopkgtest is already the newest version (1.14.1). dh-octave-autopkgtest set to manually installed. libtext-wrapper-perl is already the newest version (1.05-4). libtext-wrapper-perl set to manually installed. cpp-riscv64-linux-gnu is already the newest version (4:15.2.0-5). cpp-riscv64-linux-gnu set to manually installed. libkeyutils1 is already the newest version 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installed. libxcb-render0 is already the newest version (1.17.0-2+b2). libxcb-render0 set to manually installed. libpng16-16t64 is already the newest version (1.6.55-1). libpng16-16t64 set to manually installed. gettext is already the newest version (0.23.2-1). gettext set to manually installed. libexporter-tiny-perl is already the newest version (1.006003-1). libexporter-tiny-perl set to manually installed. libcgraph8 is already the newest version (14.1.2-1). libcgraph8 set to manually installed. octave-common is already the newest version (10.3.0-3). octave-common set to manually installed. default-jdk-doc is already the newest version (2:1.21-76). default-jdk-doc set to manually installed. ca-certificates-java is already the newest version (20240118). ca-certificates-java set to manually installed. openjdk-21-jre-headless is already the newest version (21.0.10+7-1). openjdk-21-jre-headless set to manually installed. python3.13-minimal is already the newest version (3.13.12-1). python3.13-minimal set to manually installed. librav1e0.8 is already the newest version (0.8.1-7). librav1e0.8 set to manually installed. libgraphicsmagick++-q16-12t64 is already the newest version (1.4+really1.3.46-2). libgraphicsmagick++-q16-12t64 set to manually installed. zlib1g is already the newest version (1:1.3.dfsg+really1.3.1-3). libproxy1v5 is already the newest version (0.5.12-1). libproxy1v5 set to manually installed. libmousex-nativetraits-perl is already the newest version (1.09-3). libmousex-nativetraits-perl set to manually installed. libxau-dev is already the newest version (1:1.0.11-1+b1). libxau-dev set to manually installed. cme is already the newest version (1.044-2). cme set to manually installed. libpcre2-32-0 is already the newest version (10.46-1+b1). libpcre2-32-0 set to manually installed. libxcb-render-util0 is already the newest version (0.3.10-1+b1). libxcb-render-util0 set to manually installed. libmro-compat-perl is already the newest version (0.15-2). libmro-compat-perl set to manually installed. libppix-utils-perl is already the newest version (0.003-2). libppix-utils-perl set to manually installed. libvorbisenc2 is already the newest version (1.3.7-3+b1). libvorbisenc2 set to manually installed. libjack-jackd2-0 is already the newest version (1.9.22~dfsg-5+b1). libjack-jackd2-0 set to manually installed. libsasl2-2 is already the newest version (2.1.28+dfsg1-10). libsasl2-2 set to manually installed. libtool is already the newest version (2.5.4-9). libtool set to manually installed. pkgconf is already the newest version (2.5.1-4). pkgconf set to manually installed. libjs-jquery is already the newest version (3.7.1+dfsg+~3.5.33-1). libjs-jquery set to manually installed. texinfo-lib is already the newest version (7.2-5). texinfo-lib set to manually installed. libnpth0t64 is already the newest version (1.8-3+b1). libnpth0t64 set to manually installed. libqt6network6 is already the newest version (6.9.2+dfsg-4). libqt6network6 set to manually installed. libsqlite3-0 is already the newest version (3.46.1-9). libsqlite3-0 set to manually installed. libzstd1 is already the newest version (1.5.7+dfsg-3+b1). libwmflite-0.2-7 is already the newest version (0.2.13-2). libwmflite-0.2-7 set to manually installed. libhtml-tagset-perl is already the newest version (3.24-1). libhtml-tagset-perl set to manually installed. libqhull-r8.0 is already the newest version (2020.2-8). libqhull-r8.0 set to manually installed. rpcsvc-proto is already the newest version (1.4.3-1+b2). rpcsvc-proto set to manually installed. libcamd3 is already the newest version (1:7.12.2+dfsg-1). libcamd3 set to manually installed. libltdl7 is already the newest version (2.5.4-9). libltdl7 set to manually installed. libssl-dev is already the newest version (3.5.5-1). libssl-dev set to manually installed. shared-mime-info is already the newest version (2.4-5+b3). shared-mime-info set to manually installed. libstring-format-perl is already the newest 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newest version (1.21.2-2). libheif-plugin-libde265 set to manually installed. libdrm2 is already the newest version (2.4.131-1). libdrm2 set to manually installed. libb2-1 is already the newest version (0.98.1-1.1+b3). libb2-1 set to manually installed. librtmp-dev is already the newest version (2.4+20151223.gitfa8646d.1-3+b1). librtmp-dev set to manually installed. x11proto-dev is already the newest version (2025.1-1). x11proto-dev set to manually installed. libdata-validate-domain-perl is already the newest version (0.15-1). libdata-validate-domain-perl set to manually installed. libdynaloader-functions-perl is already the newest version (0.004-2). libdynaloader-functions-perl set to manually installed. libjs-jquery-ui is already the newest version (1.13.2+dfsg-1). libjs-jquery-ui set to manually installed. libxxhash0 is already the newest version (0.8.3-2+b1). libxxhash0 set to manually installed. x11-common is already the newest version (1:7.7+26). x11-common set to manually 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installed. libyuv0 is already the newest version (0.0.1922.20260106-1). libyuv0 set to manually installed. libreadonly-perl is already the newest version (2.050-3). libreadonly-perl set to manually installed. libxss1 is already the newest version (1:1.2.3-1+b4). libxss1 set to manually installed. libcap2 is already the newest version (1:2.75-10+b5). libclone-perl is already the newest version (0.47-1+b2). libclone-perl set to manually installed. octave-dev is already the newest version (10.3.0-3). octave-dev set to manually installed. cpp-15 is already the newest version (15.2.0-13). cpp-15 set to manually installed. libb-hooks-op-check-perl is already the newest version (0.22-3+b3). libb-hooks-op-check-perl set to manually installed. libegl1 is already the newest version (1.7.0-3). libegl1 set to manually installed. libmd0 is already the newest version (1.1.0-2+b2). libqt6core6t64 is already the newest version (6.9.2+dfsg-4). libqt6core6t64 set to manually installed. dash is already the newest version (0.5.12-12). libregexp-common-perl is already the newest version (2024080801-1). libregexp-common-perl set to manually installed. libdata-validate-ip-perl is already the newest version (0.31-1). libdata-validate-ip-perl set to manually installed. libpython3.13-minimal is already the newest version (3.13.12-1). libpython3.13-minimal set to manually installed. liblz4-1 is already the newest version (1.10.0-6). liblz4-1 set to manually installed. libgvplugin-gd8 is already the newest version (14.1.2-1). libgvplugin-gd8 set to manually installed. libcurl4t64 is already the newest version (8.18.0-2). libcurl4t64 set to manually installed. krb5-multidev is already the newest version (1.22.1-2). krb5-multidev set to manually installed. libgdbm-compat4t64 is already the newest version (1.26-1+b1). libgdbm-compat4t64 set to manually installed. libxcb-shape0 is already the newest version (1.17.0-2+b2). libxcb-shape0 set to manually installed. libjson-perl is already the newest version (4.10000-1). libjson-perl set to manually installed. licensecheck is already the newest version (3.3.9-1). licensecheck set to manually installed. libccolamd3 is already the newest version (1:7.12.2+dfsg-1). libccolamd3 set to manually installed. libsub-uplevel-perl is already the newest version (0.2800-3). libsub-uplevel-perl set to manually installed. gcc-15 is already the newest version (15.2.0-13). gcc-15 set to manually installed. liblist-someutils-perl is already the newest version (0.59-1). liblist-someutils-perl set to manually installed. gcc-15-riscv64-linux-gnu is already the newest version (15.2.0-13). gcc-15-riscv64-linux-gnu set to manually installed. libclass-data-inheritable-perl is already the newest version (0.10-1). libclass-data-inheritable-perl set to manually installed. libspqr4 is already the newest version (1:7.12.2+dfsg-1). libspqr4 set to manually installed. libpcre2-dev is already the newest version (10.46-1+b1). libpcre2-dev set to manually installed. 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already the newest version (14.1.2-1). libgvpr2 set to manually installed. libwacom-common is already the newest version (2.18.0-1). libwacom-common set to manually installed. liblingua-en-inflect-perl is already the newest version (1.905-2). liblingua-en-inflect-perl set to manually installed. libsereal-encoder-perl is already the newest version (5.004+ds-1+b3). libsereal-encoder-perl set to manually installed. libexpat1-dev is already the newest version (2.7.4-1). libexpat1-dev set to manually installed. libgetopt-long-descriptive-perl is already the newest version (0.116-2). libgetopt-long-descriptive-perl set to manually installed. libconvert-binhex-perl is already the newest version (1.125-3). libconvert-binhex-perl set to manually installed. libuv1t64 is already the newest version (1.51.0-2+b1). libuv1t64 set to manually installed. libasound2-data is already the newest version (1.2.15.3-1). libasound2-data set to manually installed. libexpat1 is already the newest version (2.7.4-1). libexpat1 set to manually installed. gfortran-15 is already the newest version (15.2.0-13). gfortran-15 set to manually installed. gpgconf is already the newest version (2.4.8-5). gpgconf set to manually installed. libxcb1 is already the newest version (1.17.0-2+b2). libxcb1 set to manually installed. libfftw3-double3 is already the newest version (3.3.10-2+b2). libfftw3-double3 set to manually installed. libc6 is already the newest version (2.42-13). libtk8.6 is already the newest version (8.6.17-1+b1). libtk8.6 set to manually installed. libgmpxx4ldbl is already the newest version (2:6.3.0+dfsg-5+b1). libgmpxx4ldbl set to manually installed. librtmp1 is already the newest version (2.4+20151223.gitfa8646d.1-3+b1). librtmp1 set to manually installed. libset-intspan-perl is already the newest version (1.19-3). libset-intspan-perl set to manually installed. libmousex-strictconstructor-perl is already the newest version (0.02-3). libmousex-strictconstructor-perl set to manually installed. libpython3.13-stdlib is already the newest version (3.13.12-1). libpython3.13-stdlib set to manually installed. libngtcp2-dev is already the newest version (1.16.0-1). libngtcp2-dev set to manually installed. libnet-ssleay-perl is already the newest version (1.94-3+b1). libnet-ssleay-perl set to manually installed. libtinfo6 is already the newest version (6.6+20251231-1). libperl-critic-perl is already the newest version (1.156-1). libperl-critic-perl set to manually installed. libipc-system-simple-perl is already the newest version (1.30-2). libipc-system-simple-perl set to manually installed. xkb-data is already the newest version (2.46-2). xkb-data set to manually installed. liblog-log4perl-perl is already the newest version (1.57-1). liblog-log4perl-perl set to manually installed. libfftw3-long3 is already the newest version (3.3.10-2+b2). libfftw3-long3 set to manually installed. libqt6help6 is already the newest version (6.9.2-5). libqt6help6 set to manually installed. libppix-regexp-perl is already the newest version (0.091-1). libppix-regexp-perl set to manually installed. gcc is already the newest version (4:15.2.0-5). gcc set to manually installed. libselinux1 is already the newest version (3.9-4+b1). libperlio-gzip-perl is already the newest version (0.20-1+b3). libperlio-gzip-perl set to manually installed. default-jre-headless is already the newest version (2:1.21-76). default-jre-headless set to manually installed. libpod-spell-perl is already the newest version (1.27-1). libpod-spell-perl set to manually installed. libsuitesparseconfig7 is already the newest version (1:7.12.2+dfsg-1). libsuitesparseconfig7 set to manually installed. libnet-smtp-ssl-perl is already the newest version (1.04-2). libnet-smtp-ssl-perl set to manually installed. libxapian30 is already the newest version (1.4.29-3+b1). libxapian30 set to manually installed. libcups2t64 is already the newest version (2.4.16-1). libcups2t64 set to manually installed. liblerc4 is already the newest version (4.0.0+ds-5+b1). liblerc4 set to manually installed. dpkg is already the newest version (1.23.5). libdeflate-dev is already the newest version (1.23-2+b1). libdeflate-dev set to manually installed. libstdc++-15-dev is already the newest version (15.2.0-13). libstdc++-15-dev set to manually installed. libjs-sphinxdoc is already the newest version (8.2.3-12). libjs-sphinxdoc set to manually installed. dh-exec is already the newest version (0.31). dh-exec set to manually installed. libassuan9 is already the newest version (3.0.2-2+b1). libassuan9 set to manually installed. libc-gconv-modules-extra is already the newest version (2.42-13). libxext6 is already the newest version (2:1.3.4-1+b4). libxext6 set to manually installed. man-db is already the newest version (2.13.1-1). man-db set to manually installed. libhdf5-cpp-310 is already the newest version (1.14.6+repack-2). libhdf5-cpp-310 set to manually installed. libc-bin is already the newest version 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installed. pkgconf-bin is already the newest version (2.5.1-4). pkgconf-bin set to manually installed. g++ is already the newest version (4:15.2.0-5). g++ set to manually installed. libngtcp2-crypto-ossl0 is already the newest version (1.16.0-1). libngtcp2-crypto-ossl0 set to manually installed. unzip is already the newest version (6.0-29). unzip set to manually installed. cmake is already the newest version (4.2.3-2). cmake set to manually installed. libogg0 is already the newest version (1.3.6-2). libogg0 set to manually installed. libssl3t64 is already the newest version (3.5.5-1). libdebconfclient0 is already the newest version (0.282+b2). libaudit-common is already the newest version (1:4.1.2-1). base-passwd is already the newest version (3.6.8). gettext-base is already the newest version (0.23.2-1). gettext-base set to manually installed. dh-autoreconf is already the newest version (21+nmu1). dh-autoreconf set to manually installed. libde265-0 is already the newest version (1.0.16-1+b1). libde265-0 set to manually installed. mesa-libgallium is already the newest version (26.0.0-1). mesa-libgallium set to manually installed. libppix-quotelike-perl is already the newest version (0.023-1). libppix-quotelike-perl set to manually installed. netbase is already the newest version (6.5). netbase set to manually installed. libxcb-keysyms1 is already the newest version (0.4.1-1+b1). libxcb-keysyms1 set to manually installed. libmarkdown2 is already the newest version (2.2.7-2.1+b1). libmarkdown2 set to manually installed. libfile-homedir-perl is already the newest version (1.006-2). libfile-homedir-perl set to manually installed. libmoox-aliases-perl is already the newest version (0.001006-2). libmoox-aliases-perl set to manually installed. libregexp-pattern-perl is already the newest version (0.2.14-3). libregexp-pattern-perl set to manually installed. libharfbuzz0b is already the newest version (12.3.2-2). libharfbuzz0b set to manually installed. libemail-address-xs-perl is already the newest version (1.05-1+b3). libemail-address-xs-perl set to manually installed. libgnutls28-dev is already the newest version (3.8.12-2). libgnutls28-dev set to manually installed. libgssapi-krb5-2 is already the newest version (1.22.1-2). libgssapi-krb5-2 set to manually installed. libhdf5-dev is already the newest version (1.14.6+repack-2). libhdf5-dev set to manually installed. libldap2 is already the newest version (2.6.10+dfsg-1+b1). libldap2 set to manually installed. libzstd-dev is already the newest version (1.5.7+dfsg-3+b1). libzstd-dev set to manually installed. libfile-sharedir-perl is already the newest version (1.118-3). libfile-sharedir-perl set to manually installed. libyaml-pp-perl is already the newest version (0.39.0-1). libyaml-pp-perl set to manually installed. libumfpack6 is already the newest version (1:7.12.2+dfsg-1). libumfpack6 set to manually installed. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg -r debootsnap-dummy' exec /srv/rebuilderd/tmp/mmdebstrap.dCKh5d0Kgx (Reading database ... 55081 files and directories currently installed.) Removing debootsnap-dummy (1.0) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg-query --showformat '${binary:Package}=${Version}\n' --show > "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.dCKh5d0Kgx I: running special hook: download /pkglist ./pkglist I: running --customize-hook in shell: sh -c 'rm "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.dCKh5d0Kgx I: running special hook: upload sources.list /etc/apt/sources.list I: waiting for background processes to finish... I: cleaning package lists and apt cache... I: skipping cleanup/reproducible as requested I: creating tarball... I: done I: removing tempdir /srv/rebuilderd/tmp/mmdebstrap.dCKh5d0Kgx... I: success in 529.2998 seconds Downloading dependency 728 of 747: dh-autoreconf:riscv64=21+nmu1 Downloading dependency 729 of 747: libde265-0:riscv64=1.0.16-1+b1 Downloading dependency 730 of 747: mesa-libgallium:riscv64=26.0.0-1 Downloading dependency 731 of 747: libppix-quotelike-perl:riscv64=0.023-1 Downloading dependency 732 of 747: netbase:riscv64=6.5 Downloading dependency 733 of 747: libxcb-keysyms1:riscv64=0.4.1-1+b1 Downloading dependency 734 of 747: libmarkdown2:riscv64=2.2.7-2.1+b1 Downloading dependency 735 of 747: libfile-homedir-perl:riscv64=1.006-2 Downloading dependency 736 of 747: libmoox-aliases-perl:riscv64=0.001006-2 Downloading dependency 737 of 747: libregexp-pattern-perl:riscv64=0.2.14-3 Downloading dependency 738 of 747: libharfbuzz0b:riscv64=12.3.2-2 Downloading dependency 739 of 747: libemail-address-xs-perl:riscv64=1.05-1+b3 Downloading dependency 740 of 747: libgnutls28-dev:riscv64=3.8.12-2 Downloading dependency 741 of 747: libgssapi-krb5-2:riscv64=1.22.1-2 Downloading dependency 742 of 747: libhdf5-dev:riscv64=1.14.6+repack-2 Downloading dependency 743 of 747: libldap2:riscv64=2.6.10+dfsg-1+b1 Downloading dependency 744 of 747: libzstd-dev:riscv64=1.5.7+dfsg-3+b1 Downloading dependency 745 of 747: libfile-sharedir-perl:riscv64=1.118-3 Downloading dependency 746 of 747: libyaml-pp-perl:riscv64=0.39.0-1 Downloading dependency 747 of 747: libumfpack6:riscv64=1:7.12.2+dfsg-1 env --chdir=/srv/rebuilderd/tmp/rebuilderdLDozCh/out DEB_BUILD_OPTIONS=parallel=4 LANG=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 SOURCE_DATE_EPOCH=1771430100 SBUILD_CONFIG=/srv/rebuilderd/tmp/debrebuildhDjhtp/debrebuild.sbuildrc.xLDwM93eR_VA sbuild --build=riscv64 --host=riscv64 --arch-any --no-arch-all --chroot=/srv/rebuilderd/tmp/debrebuildhDjhtp/debrebuild.tar.aRNjETM_Ozst --chroot-mode=unshare --dist=unstable --no-run-lintian --no-run-piuparts --no-run-autopkgtest --no-apt-update --no-apt-upgrade --no-apt-distupgrade --no-source --verbose --nolog --bd-uninstallable-explainer= --build-path=/build/reproducible-path --dsc-dir=libsbml-5.20.5+dfsg /srv/rebuilderd/tmp/rebuilderdLDozCh/inputs/libsbml_5.20.5+dfsg-3.dsc I: consider moving your ~/.sbuildrc to /srv/rebuilderd/.config/sbuild/config.pl The Debian buildds switched to the "unshare" backend and sbuild will default to it in the future. To start using "unshare" add this to your `~/.config/sbuild/config.pl`: $chroot_mode = "unshare"; If you want to keep the old "schroot" mode even in the future, add the following to your `~/.config/sbuild/config.pl`: $chroot_mode = "schroot"; $schroot = "schroot"; sbuild (Debian sbuild) 0.89.3+deb13u4 (28 December 2025) on localhost +==============================================================================+ | libsbml 5.20.5+dfsg-3 (riscv64) Sun, 22 Mar 2026 06:37:10 +0000 | +==============================================================================+ Package: libsbml Version: 5.20.5+dfsg-3 Source Version: 5.20.5+dfsg-3 Distribution: unstable Machine Architecture: riscv64 Host Architecture: riscv64 Build Architecture: riscv64 Build Type: any I: No tarballs found in /srv/rebuilderd/.cache/sbuild I: Unpacking /srv/rebuilderd/tmp/debrebuildhDjhtp/debrebuild.tar.aRNjETM_Ozst to /srv/rebuilderd/tmp/tmp.sbuild.l9beFNekLe... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Fetch source files Sun, 22 Mar 2026 06:38:36 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/rebuilderd/tmp/rebuilderdLDozCh/inputs/libsbml_5.20.5+dfsg-3.dsc exists in /srv/rebuilderd/tmp/rebuilderdLDozCh/inputs; copying to chroot +------------------------------------------------------------------------------+ | Install package build dependencies Sun, 22 Mar 2026 06:38:47 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 13), dh-sequence-python3, cmake, dh-exec, doxygen, swig, libxml2-dev, python3-dev, perl, libperl-dev, default-jdk-headless, default-jdk-doc, dh-octave, r-base-dev, r-base-core, graphviz, zlib1g-dev, libbz2-dev, check, rdfind, build-essential Filtered Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 13), dh-sequence-python3, cmake, dh-exec, doxygen, swig, libxml2-dev, python3-dev, perl, libperl-dev, default-jdk-headless, default-jdk-doc, dh-octave, r-base-dev, r-base-core, graphviz, zlib1g-dev, libbz2-dev, check, rdfind, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-KbOQxL/apt_archive/sbuild-build-depends-main-dummy.deb'. Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies +------------------------------------------------------------------------------+ | Check architectures Sun, 22 Mar 2026 06:39:12 +0000 | +------------------------------------------------------------------------------+ Arch check ok (riscv64 included in any all) +------------------------------------------------------------------------------+ | Build environment Sun, 22 Mar 2026 06:39:14 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.74+deb13+1-riscv64 #1 SMP Debian 6.12.74-2 (2026-03-08) riscv64 (riscv64) Toolchain package versions: binutils_2.46-1 dpkg-dev_1.23.5 g++-15_15.2.0-13 gcc-15_15.2.0-13 libc6-dev_2.42-13 libstdc++-15-dev_15.2.0-13 libstdc++6_15.2.0-13 linux-libc-dev_6.18.12-1 Package versions: aglfn_1.7+git20191031.4036a9c-2 appstream_1.1.2-1 autoconf_2.72-3.1 automake_1:1.18.1-3 autopoint_0.23.2-1 autotools-dev_20240727.1 base-files_14 base-passwd_3.6.8 bash_5.3-2 binutils_2.46-1 binutils-common_2.46-1 binutils-riscv64-linux-gnu_2.46-1 bsdextrautils_2.41.3-3 build-essential_12.12 bzip2_1.0.8-6+b1 ca-certificates_20250419 ca-certificates-java_20240118 check_0.15.2-3 cmake_4.2.3-2 cmake-data_4.2.3-2 cme_1.044-2 comerr-dev_2.1-1.47.2-3+b8 coreutils_9.7-3 cpp_4:15.2.0-5 cpp-15_15.2.0-13 cpp-15-riscv64-linux-gnu_15.2.0-13 cpp-riscv64-linux-gnu_4:15.2.0-5 dash_0.5.12-12 debconf_1.5.92 debhelper_13.30 debianutils_5.23.2 default-jdk-doc_2:1.21-76 default-jdk-headless_2:1.21-76 default-jre-headless_2:1.21-76 dh-autoreconf_21+nmu1 dh-exec_0.31 dh-octave_1.14.1 dh-octave-autopkgtest_1.14.1 dh-python_7.20260125 dh-strip-nondeterminism_1.15.0-1 diffstat_1.68-1 diffutils_1:3.12-1 doxygen_1.15.0+ds1-1+b1 dpkg_1.23.5 dpkg-dev_1.23.5 dwz_0.16-2 file_1:5.46-5+b1 findutils_4.10.0-3 fontconfig_2.17.1-5 fontconfig-config_2.17.1-5 fonts-freefont-otf_20211204+svn4273-4 g++_4:15.2.0-5 g++-15_15.2.0-13 g++-15-riscv64-linux-gnu_15.2.0-13 g++-riscv64-linux-gnu_4:15.2.0-5 gcc_4:15.2.0-5 gcc-15_15.2.0-13 gcc-15-base_15.2.0-13 gcc-15-riscv64-linux-gnu_15.2.0-13 gcc-riscv64-linux-gnu_4:15.2.0-5 gettext_0.23.2-1 gettext-base_0.23.2-1 gfortran_4:15.2.0-5 gfortran-15_15.2.0-13 gfortran-15-riscv64-linux-gnu_15.2.0-13 gfortran-riscv64-linux-gnu_4:15.2.0-5 gnuplot-data_6.0.3+dfsg1-1 gnuplot-nox_6.0.3+dfsg1-1 gpg_2.4.8-5 gpgconf_2.4.8-5 graphviz_14.1.2-1 grep_3.12-1 groff-base_1.23.0-10 gzip_1.13-1 hdf5-helpers_1.14.6+repack-2 hostname_3.25 icu-devtools_76.1-4+b1 init-system-helpers_1.69 intltool-debian_0.35.0+20060710.6 iso-codes_4.20.1-1 java-common_0.76 krb5-multidev_1.22.1-2 libabsl20240722_20240722.0-4 libacl1_2.3.2-3 libaec-dev_1.1.5-1 libaec0_1.1.5-1 libalgorithm-c3-perl_0.11-2 libaliased-perl_0.34-3 libamd3_1:7.12.2+dfsg-1 libaom3_3.13.1-2 libapp-cmd-perl_0.338-1 libappstream5_1.1.2-1 libapt-pkg-perl_0.1.43 libapt-pkg7.0_3.1.16 libarchive-zip-perl_1.68-1 libarchive13t64_3.8.5-1 libarpack2t64_3.9.1-6+b1 libarray-intspan-perl_2.004-2 libasan8_15.2.0-13 libasound2-data_1.2.15.3-1 libasound2t64_1.2.15.3-1 libassuan9_3.0.2-2+b1 libatomic1_15.2.0-13 libattr1_1:2.5.2-4 libaudit-common_1:4.1.2-1 libaudit1_1:4.1.2-1+b1 libavahi-client3_0.8-18 libavahi-common-data_0.8-18 libavahi-common3_0.8-18 libavif16_1.3.0-1+b2 libb-hooks-endofscope-perl_0.28-2 libb-hooks-op-check-perl_0.22-3+b3 libb-keywords-perl_1.29-1 libb2-1_0.98.1-1.1+b3 libberkeleydb-perl_0.66-2 libbinutils_2.46-1 libblas-dev_3.12.1-7+b1 libblas3_3.12.1-7+b1 libblkid1_2.41.3-3 libboolean-perl_0.46-3 libbrotli-dev_1.2.0-3 libbrotli1_1.2.0-3 libbsd0_0.12.2-2+b1 libbz2-1.0_1.0.8-6+b1 libbz2-dev_1.0.8-6+b1 libc-bin_2.42-13 libc-dev-bin_2.42-13 libc-gconv-modules-extra_2.42-13 libc6_2.42-13 libc6-dev_2.42-13 libcairo2_1.18.4-3 libcamd3_1:7.12.2+dfsg-1 libcap-ng0_0.8.5-4+b2 libcap2_1:2.75-10+b5 libcapture-tiny-perl_0.50-1 libcarp-assert-more-perl_2.9.0-1 libcc1-0_15.2.0-13 libccolamd3_1:7.12.2+dfsg-1 libcdt6_14.1.2-1 libcgi-pm-perl_4.71-1 libcgraph8_14.1.2-1 libcholmod5_1:7.12.2+dfsg-1 libclang-cpp21_1:21.1.8-3 libclang1-21_1:21.1.8-3 libclass-c3-perl_0.35-2 libclass-data-inheritable-perl_0.10-1 libclass-inspector-perl_1.36-3 libclass-load-perl_0.25-2 libclass-method-modifiers-perl_2.15-1 libclass-tiny-perl_1.008-2 libclass-xsaccessor-perl_1.19-4+b4 libclone-choose-perl_0.010-2 libclone-perl_0.47-1+b2 libcolamd3_1:7.12.2+dfsg-1 libcom-err2_1.47.2-3+b8 libconfig-inifiles-perl_3.000003-4 libconfig-model-backend-yaml-perl_2.134-2 libconfig-model-dpkg-perl_3.017 libconfig-model-perl_2.155-1 libconfig-tiny-perl_2.30-1 libconst-fast-perl_0.014-2 libconvert-binhex-perl_1.125-3 libcpanel-json-xs-perl_4.40-1 libcrypt-dev_1:4.5.1-1 libcrypt1_1:4.5.1-1 libctf-nobfd0_2.46-1 libctf0_2.46-1 libcups2t64_2.4.16-1 libcurl3t64-gnutls_8.18.0-2 libcurl4-openssl-dev_8.18.0-2 libcurl4t64_8.18.0-2 libcxsparse4_1:7.12.2+dfsg-1 libdata-dpath-perl_0.60-1 libdata-messagepack-perl_1.02-3 libdata-optlist-perl_0.114-1 libdata-section-perl_0.200008-1 libdata-validate-domain-perl_0.15-1 libdata-validate-ip-perl_0.31-1 libdata-validate-uri-perl_0.07-3 libdatrie1_0.2.14-1 libdav1d7_1.5.3-1+b1 libdb5.3t64_5.3.28+dfsg2-11 libdbus-1-3_1.16.2-3 libde265-0_1.0.16-1+b1 libdebconfclient0_0.282+b2 libdebhelper-perl_13.30 libdeflate-dev_1.23-2+b1 libdeflate0_1.23-2+b1 libdevel-callchecker-perl_0.009-3 libdevel-size-perl_0.86-1 libdevel-stacktrace-perl_2.0500-1 libdouble-conversion3_3.4.0-1 libdpkg-perl_1.23.5 libdrm-amdgpu1_2.4.131-1 libdrm-common_2.4.131-1 libdrm2_2.4.131-1 libduktape207_2.7.0-2+b3 libdynaloader-functions-perl_0.004-2 libedit2_3.1-20251016-1 libegl-mesa0_26.0.0-1 libegl1_1.7.0-3 libelf1t64_0.194-1 libemail-address-xs-perl_1.05-1+b3 libencode-locale-perl_1.05-3 liberror-perl_0.17030-1 libevdev2_1.13.6+dfsg-1 libevent-2.1-7t64_2.1.12-stable-10+b2 libexception-class-perl_1.45-1 libexpat1_2.7.4-1 libexpat1-dev_2.7.4-1 libexporter-lite-perl_0.09-2 libexporter-tiny-perl_1.006003-1 libfeature-compat-class-perl_0.08-1 libfeature-compat-try-perl_0.05-1 libffi8_3.5.2-3+b1 libfftw3-bin_3.3.10-2+b2 libfftw3-dev_3.3.10-2+b2 libfftw3-double3_3.3.10-2+b2 libfftw3-long3_3.3.10-2+b2 libfftw3-single3_3.3.10-2+b2 libfile-basedir-perl_0.09-2 libfile-find-rule-perl_0.35-1 libfile-homedir-perl_1.006-2 libfile-libmagic-perl_1.23-2+b2 libfile-listing-perl_6.16-1 libfile-sharedir-perl_1.118-3 libfile-stripnondeterminism-perl_1.15.0-1 libfile-which-perl_1.27-2 libflac14_1.5.0+ds-5 libfltk-gl1.3t64_1.3.11-3 libfltk1.3t64_1.3.11-3 libfmt10_10.1.1+ds1-4+b1 libfont-ttf-perl_1.06-2 libfontconfig1_2.17.1-5 libfreetype6_2.14.1+dfsg-2 libfribidi0_1.0.16-5 libfyaml0_0.9.4-1 libgav1-2_0.20.0-2 libgbm1_26.0.0-1 libgcc-15-dev_15.2.0-13 libgcc-s1_15.2.0-13 libgcrypt20_1.11.2-3+b1 libgd3_2.3.3-13+b1 libgdbm-compat4t64_1.26-1+b1 libgdbm6t64_1.26-1+b1 libgetopt-long-descriptive-perl_0.116-2 libgfortran-15-dev_15.2.0-13 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+0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libsbml Binary: libsbml5-dev, libsbml5t64, python3-sbml5, libsbml5-java, libsbml5-perl, libsbml5-octave, libsbml5-examples, libsbml5-doc, libsbml5-perl-doc, python3-sbml5-doc Architecture: any all Version: 5.20.5+dfsg-3 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://www.sbml.org/ Standards-Version: 4.7.3 Vcs-Browser: https://salsa.debian.org/med-team/libsbml Vcs-Git: https://salsa.debian.org/med-team/libsbml.git Testsuite: autopkgtest Testsuite-Triggers: python3 Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 13), dh-sequence-python3, cmake, dh-exec, doxygen , swig, libxml2-dev, python3-dev, perl, libperl-dev, default-jdk-headless, default-jdk-doc, dh-octave, r-base-dev, r-base-core, graphviz , zlib1g-dev, libbz2-dev, check, rdfind Package-List: libsbml5-dev deb libdevel optional arch=any libsbml5-doc deb doc optional arch=all profile=!nodoc profile:v1=!nodoc libsbml5-examples deb doc optional arch=all profile=!nodoc profile:v1=!nodoc libsbml5-java deb java optional arch=any libsbml5-octave deb math optional arch=any libsbml5-perl deb perl optional arch=any libsbml5-perl-doc deb doc optional arch=all profile=!nodoc profile:v1=!nodoc libsbml5t64 deb libs optional arch=any python3-sbml5 deb python optional arch=any python3-sbml5-doc deb doc optional arch=all profile=!nodoc profile:v1=!nodoc Checksums-Sha1: 75c64a46d9a769f6891f43356fda3b39672ad3d0 15814028 libsbml_5.20.5+dfsg.orig.tar.xz e7fc2c533f36b5a34dbda05b648009e1eecc0431 24968 libsbml_5.20.5+dfsg-3.debian.tar.xz Checksums-Sha256: 230fcddf7d1212d0795bec5254b43839cc828c5786f12c52e7d63168a7574e32 15814028 libsbml_5.20.5+dfsg.orig.tar.xz acb05ff464d19280a246d245416ff71df813746549534a0d2e2e20b10faf5b97 24968 libsbml_5.20.5+dfsg-3.debian.tar.xz Files: ce53728e0d5eda7a6432cf22164047de 15814028 libsbml_5.20.5+dfsg.orig.tar.xz 507c087d27e1bb0c98a03a6ef394d097 24968 libsbml_5.20.5+dfsg-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJCBAEBCgAsFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmmWLBAOHHRpbGxlYUBy a2kuZGUACgkQV4oElNHGRtGx4w//TiGwZYD0ntx4mNiUrNkB9dKHo6Y0RIyqcw9e JsY0JovaGcUChZA0IP8NPT42P7nHSmHnjU++u8tJKqBgrz5ZzbEtkPt+aho3QpNS LBLTSXU19Yniw3uZ0eNPnZX8LsDYra3zk5LZ1EhXPw1BJmTwjqKxgbtXRw9/JcIh WYsUa/3WuPCJ7o/zLFZc2SFR53yVDHW2B5mY6morMCt6bsPOsMudgpa1eJO3+mkD OZxF+RaI8Qb6pbsgvaNSVAIexChTrlqsZNHhlQ2ePV8EvUjLpe+Za+UYDK4TkuvL md+qhQ0wx17r0KOAVoV6q2tYoHsxcLvJ8MKbBnVb7lv9rerO3RCh1Z9OxmxJjycI zDYY+PRkGSW3JUSOEKMUFdUjnr+w+YhmolEoTCPSlkHy2gu6jH8V7VC930ZCwRpG F1UUU0dde20BILo+ywkh3VGrTN2E+54PUlICBjGRwKoEUkl7S4mOkxKfVjVIhc8l 6dQWfyNXxmbU0/nTHD2OsJvmKjejcL6kXnARhvbXC+wEqqh87AaL1TMAFm8Es/at ppGmoL8CO3WkJGKKwKCf23jIlN/xNPCbXuBh3YQ1UGpuA3h9mwo2NGi+2vpXrcYy sNjrBT0ydK7aNKUaH6tDgrq4nXf7Fkpj04Ie2KB6EHd6DwWTtTmuTKirc+/86kK3 dZUUCQc= =eTdc -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./libsbml_5.20.5+dfsg-3.dsc: missing OpenPGP keyrings dpkg-source: info: verifying ./libsbml_5.20.5+dfsg-3.dsc dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-keyring.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-tag2upload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-nonupload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-maintainers.pgp dpkg-source: info: extracting libsbml in /build/reproducible-path/libsbml-5.20.5+dfsg dpkg-source: info: unpacking libsbml_5.20.5+dfsg.orig.tar.xz dpkg-source: info: unpacking libsbml_5.20.5+dfsg-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying perl-installdirs.patch dpkg-source: info: applying hardening.patch dpkg-source: info: applying swig-3.x.patch dpkg-source: info: applying mips-compile-with-O1.patch dpkg-source: info: applying javadoc_java9.patch dpkg-source: info: applying javadoc.patch dpkg-source: info: applying remove_SBMLDoclet.patch dpkg-source: info: applying fix_python_interpreter.patch dpkg-source: info: applying missing_header.patch dpkg-source: info: applying doxygen_mathjax_path.patch dpkg-source: info: applying gcc-15.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh SOURCE_DATE_EPOCH=1771430100 USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -B dpkg-buildpackage: info: source package libsbml dpkg-buildpackage: info: source version 5.20.5+dfsg-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture riscv64 dpkg-source: info: using options from libsbml-5.20.5+dfsg/debian/source/options: --extend-diff-ignore=(^|/)(src/sbml/validator/constraints/.*|src/bindings/csharp/csharp-files.*|src/sbml/extension/SBMLExtensionRegistry.*|src/sbml/packages/comp/validator/constraints/CompIdBase.cpp|src/bindings/java/java-files/org/sbml/libsbml/SBMLExtensionRegistry.java|src/sbml/xml/XMLErrorLog.cpp|docs/src/doxygen-config-common.txt)$ debian/rules clean dh clean --builddir=build --buildsystem=cmake --without autoreconf --no-parallel dh_auto_clean -O--builddir=build -O--buildsystem=cmake -O--no-parallel debian/rules execute_after_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg' ### the clean target of the libsbml makefile is highly b0rken ### ### the switch to cmake didn't result in great approvements ### ### still inline changes of files ### ### very ugly ### rm -rf build docs/formatted docs/src/doxygen-version-specific.txt docs/src/doxygen-config-cpp.txt \ docs/src/doxygen-config-csharp.txt docs/src/doxygen-config-perl.txt docs/src/doxygen-config-python.txt \ docs/src/java-substitutions/libsbmlConstants.java docs/src/libsbml-installation.html docs/src/perlmod/DoxyDocs.pm \ docs/src/perlmod/DoxyStructure.pm docs/src/perlmod/Makefile docs/src/perlmod/doxyrules.make \ src/bindings/matlab/runTests.log docs/src/doxygen-config-c.txt src/bindings/matlab/*.mex* docs/src/perlmod \ docs/src/doxygen_sqlite3.db docs/src/libsbml.py docs/src/common-text/libsbml-version.html find src/bindings -name "*.pyc" -delete make[1]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg' dh_clean -O--builddir=build -O--buildsystem=cmake -O--no-parallel debian/rules binary-arch dh binary-arch --builddir=build --buildsystem=cmake --without autoreconf --no-parallel dh_update_autotools_config -a -O--builddir=build -O--buildsystem=cmake -O--no-parallel debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg' dh_auto_configure -- -DENABLE_COMP:BOOL=ON -DENABLE_FBC:BOOL=ON -DENABLE_GROUPS:BOOL=ON -DENABLE_LAYOUT:BOOL=ON -DENABLE_QUAL:BOOL=ON -DENABLE_RENDER:BOOL=ON -DWITH_BZIP2:BOOL=ON -DWITH_CPP_NAMESPACE:BOOL=OFF -DWITH_EXAMPLES:BOOL=OFF -DWITH_EXPAT:BOOL=OFF -DWITH_JAVA:BOOL=ON -DWITH_LIBXML:BOOL=ON -DWITH_OCTAVE:BOOL=ON -DWITH_PERL:BOOL=ON -DWITH_PYTHON:BOOL=ON -DWITH_R:BOOL=OFF -DWITH_RUBY:BOOL=OFF -DWITH_SWIG:BOOL=ON -DWITH_WALL:BOOL=ON -DWITH_XERCES:BOOL=OFF -DWITH_ZLIB:BOOL=ON -DJDK_PATH:STRING=/usr/lib/jvm/default-java -DJAVA_INCLUDE_PATH:STRING=/usr/lib/jvm/default-java/include -DWITH_DOXYGEN:BOOL=ON -DWITH_CHECK:BOOL=ON -DPYTHON_EXECUTABLE=/usr/bin/python3.13 -DWITH_CSHARP:BOOL=OFF cd build && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/riscv64-linux-gnu -DENABLE_COMP:BOOL=ON -DENABLE_FBC:BOOL=ON -DENABLE_GROUPS:BOOL=ON -DENABLE_LAYOUT:BOOL=ON -DENABLE_QUAL:BOOL=ON -DENABLE_RENDER:BOOL=ON -DWITH_BZIP2:BOOL=ON -DWITH_CPP_NAMESPACE:BOOL=OFF -DWITH_EXAMPLES:BOOL=OFF -DWITH_EXPAT:BOOL=OFF -DWITH_JAVA:BOOL=ON -DWITH_LIBXML:BOOL=ON -DWITH_OCTAVE:BOOL=ON -DWITH_PERL:BOOL=ON -DWITH_PYTHON:BOOL=ON -DWITH_R:BOOL=OFF -DWITH_RUBY:BOOL=OFF -DWITH_SWIG:BOOL=ON -DWITH_WALL:BOOL=ON -DWITH_XERCES:BOOL=OFF -DWITH_ZLIB:BOOL=ON -DJDK_PATH:STRING=/usr/lib/jvm/default-java -DJAVA_INCLUDE_PATH:STRING=/usr/lib/jvm/default-java/include -DWITH_DOXYGEN:BOOL=ON -DWITH_CHECK:BOOL=ON -DPYTHON_EXECUTABLE=/usr/bin/python3.13 -DWITH_CSHARP:BOOL=OFF .. -- The C compiler identification is GNU 15.2.0 -- The CXX compiler identification is GNU 15.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Found SWIG: /usr/bin/swig (found version "4.4.0") -- Found PkgConfig: /usr/bin/pkg-config (found version "2.5.1") CMake Warning at CMakeModules/FindZLIB.cmake:89 (message): The chosen zlib library does not appear to be valid because it is missing certain required symbols. Please check that is the correct zlib library. For details about the error, please see /CMakeFiles/CMakeError.log Call Stack (most recent call first): CMakeModules/FindLIBXML.cmake:69 (find_package) CMakeLists.txt:460 (find_package) -- Looking for sin in m -- Looking for sin in m - found -- Performing Test LIBXML_LIBXML_TEST -- Performing Test LIBXML_LIBXML_TEST - Success -- LIBXML_LIBXML_TEST = 1 -- Found LIBXML: /usr/lib/riscv64-linux-gnu/libxml2.so (found version "2.15.1") -- Looking for BZ2_bzCompressInit in /usr/lib/riscv64-linux-gnu/libbz2.so -- Looking for BZ2_bzCompressInit in /usr/lib/riscv64-linux-gnu/libbz2.so - found -- Found BZ2: /usr/lib/riscv64-linux-gnu/libbz2.so (found version "1.0.8") -- Found ZLIB: /usr/lib/riscv64-linux-gnu/libz.so (found version "1.3.1") -- Performing Test CHECK_CHECK_TEST -- Performing Test CHECK_CHECK_TEST - Failed -- Performing Test CHECK_CHECK_TEST2 -- Performing Test CHECK_CHECK_TEST2 - Success -- Found CHECK: /usr/lib/riscv64-linux-gnu/libcheck.a (found version "0.2") -- Looking for include file check.h -- Looking for include file check.h - found -- Looking for include file expat.h -- Looking for include file expat.h - found -- Looking for include file errno.h -- Looking for include file errno.h - found -- Looking for include file ieeefp.h -- Looking for include file ieeefp.h - not found -- Looking for include file math.h -- Looking for include file math.h - found -- Looking for include file sys/types.h -- Looking for include file sys/types.h - found -- Looking for include file float.h -- Looking for include file float.h - found -- Looking for sqrt in m -- Looking for sqrt in m - found -- Could NOT find JNI (missing: AWT) -- Found Java: /usr/bin/java (found version "21.0.10") found components: Development CMake Warning (dev) at src/bindings/java/CMakeLists.txt:37 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Found PythonInterp: /usr/bin/python3.13 (found version "3.13.12") CMake Warning (dev) at src/bindings/perl/CMakeLists.txt:36 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Found Perl: /usr/bin/perl (found version "5.40.1") -- Found PerlLibs: /usr/lib/riscv64-linux-gnu/libperl.so.5.40 (found version "5.40.1") CMake Warning (dev) at src/bindings/octave/FindOctave.cmake:83: Syntax Warning in cmake code at column 32 Argument not separated from preceding token by whitespace. Call Stack (most recent call first): src/bindings/octave/CMakeLists.txt:36 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at src/bindings/octave/FindOctave.cmake:88: Syntax Warning in cmake code at column 32 Argument not separated from preceding token by whitespace. Call Stack (most recent call first): src/bindings/octave/CMakeLists.txt:36 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at src/bindings/octave/FindOctave.cmake:93: Syntax Warning in cmake code at column 32 Argument not separated from preceding token by whitespace. Call Stack (most recent call first): src/bindings/octave/CMakeLists.txt:36 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. mkoctfile: unknown variable 'LFLAGS' CMake Warning (dev) at src/bindings/python/CMakeLists.txt:36 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at src/bindings/python/CMakeLists.txt:41 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Found PythonLibs: /usr/lib/riscv64-linux-gnu/libpython3.13.so (found version "3.13.12") -- Found Doxygen: /usr/bin/doxygen (found version "1.15.0") found components: doxygen dot CMake Warning (dev) at docs/CMakeLists.txt:36 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- ---------------------------------------------------------------------- libSBML version 5.20.5 ---------------------------------------------------------------------- More information and the latest version are available online at https://sbml.org/software/libsbml/ Please report problems using the issue tracker at https://github.com/sbmlteam/libsbml/issues To contact the developers directly, email libsbml-team@googlegroups.com Configured on host 'sbuild' host type = Linux host operating system = Linux 6.12.74+deb13+1-riscv64 host CPU architecture = riscv64 General build flags: CC = /usr/bin/cc CXX = /usr/bin/c++ CPPFLAGS = -DLINUX CFLAGS = -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC CXXFLAGS = -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC LDFLAGS = -Wl,-z,relro -Wl,-z,now XML parser library configuration: XML library = libxml2 CPPFLAGS for XML = -I/usr/include/libxml2 LIBS for XML = /usr/lib/riscv64-linux-gnu/libxml2.so Other libSBML configuration settings: Installation $prefix = /usr -- Value of $LD_LIBRARY_PATH = -- Using SWIG = /usr/bin/swig (Version 4.4.0) -- Using Java = /usr/bin/java -- Using Python = /usr/bin/python3.13 -- Using Perl = /usr/bin/perl -- Using Octave = /usr/bin/mkoctfile -- Using libcheck = /usr/lib/riscv64-linux-gnu/libcheck.a -- Using C++ namespace ('libsbml') = no -- -- Build examples = no -- -- -- Support for SBML Level 3 Packages: -- SBML 'arrays' package = OFF -- SBML 'comp' package = ON -- SBML 'distrib' package = OFF -- SBML 'dyn' package = OFF -- SBML 'fbc' package = ON -- SBML 'groups' package = ON -- SBML 'l3v2extendedmath' package = ON -- SBML 'layout' package = ON -- SBML 'multi' package = OFF -- SBML 'qual' package = ON -- SBML 'render' package = ON -- SBML 'req' package = OFF -- SBML 'spatial' package = OFF -- -- Other potentially important settings: -- Compression support is enabled for .zip and .gz files -- Compression support is enabled for .bz2 files -- ---------------------------------------------------------------------- -- Configuring done (24.0s) -- Generating done (3.6s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/libsbml-5.20.5+dfsg/build ### The following command is a hack to get around Bug#1125648. ### For some unkown reason, the value the LIBDIR installation directory ### is wrong after the invokation of cmake. It is set to: ### /<>/debian/tmp/<>/build/lib/<> ### but should actually be: ### /<>/debian/tmp/lib/<> sed -i build/CMakeCache.txt \ -e "s;^CMAKE_INSTALL_LIBDIR.*;CMAKE_INSTALL_LIBDIR:PATH=lib/$DEB_BUILD_MULTIARCH;" make[1]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg' dh_auto_build -a -O--builddir=build -O--buildsystem=cmake -O--no-parallel cd build && make -j1 INSTALL="install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' /usr/bin/cmake -S/build/reproducible-path/libsbml-5.20.5+dfsg -B/build/reproducible-path/libsbml-5.20.5+dfsg/build --check-build-system CMakeFiles/Makefile.cmake 0 Re-run cmake file: Makefile older than: CMakeCache.txt -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done CMake Warning at CMakeModules/FindZLIB.cmake:89 (message): The chosen zlib library does not appear to be valid because it is missing certain required symbols. Please check that is the correct zlib library. For details about the error, please see /CMakeFiles/CMakeError.log Call Stack (most recent call first): CMakeModules/FindLIBXML.cmake:69 (find_package) CMakeLists.txt:460 (find_package) -- LIBXML_LIBXML_TEST = 1 -- Performing Test CHECK_CHECK_TEST -- Performing Test CHECK_CHECK_TEST - Failed -- Performing Test CHECK_CHECK_TEST2 -- Performing Test CHECK_CHECK_TEST2 - Success -- Could NOT find JNI (missing: AWT) CMake Warning (dev) at src/bindings/java/CMakeLists.txt:37 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at src/bindings/perl/CMakeLists.txt:36 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at src/bindings/octave/FindOctave.cmake:83: Syntax Warning in cmake code at column 32 Argument not separated from preceding token by whitespace. Call Stack (most recent call first): src/bindings/octave/CMakeLists.txt:36 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at src/bindings/octave/FindOctave.cmake:88: Syntax Warning in cmake code at column 32 Argument not separated from preceding token by whitespace. Call Stack (most recent call first): src/bindings/octave/CMakeLists.txt:36 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at src/bindings/octave/FindOctave.cmake:93: Syntax Warning in cmake code at column 32 Argument not separated from preceding token by whitespace. Call Stack (most recent call first): src/bindings/octave/CMakeLists.txt:36 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. mkoctfile: unknown variable 'LFLAGS' CMake Warning (dev) at src/bindings/python/CMakeLists.txt:36 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at src/bindings/python/CMakeLists.txt:41 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at docs/CMakeLists.txt:36 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- ---------------------------------------------------------------------- libSBML version 5.20.5 ---------------------------------------------------------------------- More information and the latest version are available online at https://sbml.org/software/libsbml/ Please report problems using the issue tracker at https://github.com/sbmlteam/libsbml/issues To contact the developers directly, email libsbml-team@googlegroups.com Configured on host 'sbuild' host type = Linux host operating system = Linux 6.12.74+deb13+1-riscv64 host CPU architecture = riscv64 General build flags: CC = /usr/bin/cc CXX = /usr/bin/c++ CPPFLAGS = -DLINUX CFLAGS = -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC CXXFLAGS = -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC LDFLAGS = -Wl,-z,relro -Wl,-z,now XML parser library configuration: XML library = libxml2 CPPFLAGS for XML = -I/usr/include/libxml2 LIBS for XML = /usr/lib/riscv64-linux-gnu/libxml2.so Other libSBML configuration settings: Installation $prefix = /usr -- Value of $LD_LIBRARY_PATH = -- Using SWIG = /usr/bin/swig (Version 4.4.0) -- Using Java = /usr/bin/java -- Using Python = /usr/bin/python3.13 -- Using Perl = /usr/bin/perl -- Using Octave = /usr/bin/mkoctfile -- Using libcheck = /usr/lib/riscv64-linux-gnu/libcheck.a -- Using C++ namespace ('libsbml') = no -- -- Build examples = no -- -- -- Support for SBML Level 3 Packages: -- SBML 'arrays' package = OFF -- SBML 'comp' package = ON -- SBML 'distrib' package = OFF -- SBML 'dyn' package = OFF -- SBML 'fbc' package = ON -- SBML 'groups' package = ON -- SBML 'l3v2extendedmath' package = ON -- SBML 'layout' package = ON -- SBML 'multi' package = OFF -- SBML 'qual' package = ON -- SBML 'render' package = ON -- SBML 'req' package = OFF -- SBML 'spatial' package = OFF -- -- Other potentially important settings: -- Compression support is enabled for .zip and .gz files -- Compression support is enabled for .bz2 files -- ---------------------------------------------------------------------- -- Configuring done (7.5s) -- Generating done (3.5s) -- Build files have been written to: /build/reproducible-path/libsbml-5.20.5+dfsg/build /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/libsbml-5.20.5+dfsg/build/CMakeFiles /build/reproducible-path/libsbml-5.20.5+dfsg/build//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/CMakeFiles/sbml.dir/build.make src/CMakeFiles/sbml.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/CMakeFiles/sbml.dir/DependInfo.cmake "--color=" sbml make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/CMakeFiles/sbml.dir/build.make src/CMakeFiles/sbml.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 0%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompExtension.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompExtension.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegister.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.cpp:36: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 0%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:67: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:77: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.cpp: In member function ‘Submodel* CompModelPlugin::createSubmodel()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.cpp:314:3: note: in expansion of macro ‘COMP_CREATE_NS’ 314 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.cpp: In member function ‘Port* CompModelPlugin::createPort()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.cpp:451:3: note: in expansion of macro ‘COMP_CREATE_NS’ 451 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 0%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:72: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ModelDefinition.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:84: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:75: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp: In member function ‘ModelDefinition* CompSBMLDocumentPlugin::createModelDefinition()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:401:3: note: in expansion of macro ‘COMP_CREATE_NS’ 401 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp: In member function ‘ExternalModelDefinition* CompSBMLDocumentPlugin::createExternalModelDefinition()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:538:3: note: in expansion of macro ‘COMP_CREATE_NS’ 538 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 0%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:72: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function ‘virtual SBase* CompSBasePlugin::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:175:7: note: in expansion of macro ‘COMP_CREATE_NS’ 175 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function ‘ReplacedElement* CompSBasePlugin::createReplacedElement()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:374:3: note: in expansion of macro ‘COMP_CREATE_NS’ 374 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function ‘ReplacedBy* CompSBasePlugin::createReplacedBy()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:444:3: note: in expansion of macro ‘COMP_CREATE_NS’ 444 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function ‘virtual void CompSBasePlugin::createListOfReplacedElements()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:551:5: note: in expansion of macro ‘COMP_CREATE_NS’ 551 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 0%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/CompBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/CompBase.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/CompBase.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/CompBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:52, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.cpp:38: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 0%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Deletion.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Deletion.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Deletion.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Deletion.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Deletion.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Deletion.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Deletion.h:104, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Deletion.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Deletion.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ModelDefinition.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:84, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfDeletions.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfDeletions.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Deletion.h:104, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfDeletions.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfDeletions.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfDeletions.cpp: In member function ‘virtual SBase* ListOfDeletions::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfDeletions.cpp:167:5: note: in expansion of macro ‘COMP_CREATE_NS’ 167 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:122, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp: In member function ‘virtual SBase* ListOfExternalModelDefinitions::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp:160:5: note: in expansion of macro ‘COMP_CREATE_NS’ 160 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ModelDefinition.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfModelDefinitions.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp: In member function ‘virtual SBase* ListOfModelDefinitions::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp:160:5: note: in expansion of macro ‘COMP_CREATE_NS’ 160 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfPorts.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfPorts.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Port.h:85, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfPorts.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfPorts.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfPorts.cpp: In member function ‘virtual SBase* ListOfPorts::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfPorts.cpp:159:5: note: in expansion of macro ‘COMP_CREATE_NS’ 159 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp: In member function ‘virtual SBase* ListOfReplacedElements::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp:123:5: note: in expansion of macro ‘COMP_CREATE_NS’ 123 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:118, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp: In member function ‘virtual SBase* ListOfSubmodels::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp:159:5: note: in expansion of macro ‘COMP_CREATE_NS’ 159 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ModelDefinition.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ModelDefinition.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ModelDefinition.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ModelDefinition.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ModelDefinition.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Port.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Port.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Port.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Port.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Port.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Port.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Port.h:85, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Port.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ReplacedBy.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ReplacedBy.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ReplacedBy.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ReplacedBy.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedBy.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedBy.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedBy.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedBy.h:62: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedBy.h:65: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedBy.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Replacing.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Replacing.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Replacing.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Replacing.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:77, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.cpp: In member function ‘SBaseRef* SBaseRef::createSBaseRef()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.cpp:553:5: note: in expansion of macro ‘COMP_CREATE_NS’ 553 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.cpp: In member function ‘virtual SBase* SBaseRef::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.cpp:672:7: note: in expansion of macro ‘COMP_CREATE_NS’ 672 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.cpp:683:7: note: in expansion of macro ‘COMP_CREATE_NS’ 683 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Submodel.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Submodel.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Submodel.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Submodel.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/L3Parser.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Rule.h:147, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/RateRule.h:154, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.cpp:40: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ModelDefinition.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:84, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.cpp: In member function ‘Deletion* Submodel::createDeletion()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.cpp:498:3: note: in expansion of macro ‘COMP_CREATE_NS’ 498 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/CompFlatteningConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/CompFlatteningConverter.h:492, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/CompFlatteningConverter.cpp:38: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:67: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:77: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/CompFlatteningConverter.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/SBMLFileResolver.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/SBMLFileResolver.cpp:38: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolver.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolver.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolver.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolver.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/SBMLResolver.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/SBMLResolver.cpp:38: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/SBMLResolverRegistry.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/SBMLResolverRegistry.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLUri.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLUri.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLUri.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLUri.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/SBMLUri.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/SBMLUri.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/CompConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompConsistencyConstraints.cpp:39, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/CompConsistencyValidator.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:58: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompConsistencyConstraints.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdentifierConsistencyConstraints.cpp:39, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:58: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueModelIds.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdentifierConsistencyConstraints.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompUnitConsistencyConstraints.cpp:39, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:58: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UnitReplacementCheck.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompUnitConsistencyConstraints.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/CompValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/CompValidator.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:58: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/CompValidator.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ClassReplacements.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ClassReplacements.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ClassReplacements.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ClassReplacements.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/ClassReplacements.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/ClassReplacements.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/FunctionDefinition.h:140, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:454: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/ClassReplacements.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/ClassReplacements.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:58: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/FunctionDefinition.h:140, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:454: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:77, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp:40: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp: In member function ‘void ExtModelReferenceCycles::logCycle(const Model&, std::string, std::string)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp:290:3: note: in expansion of macro ‘COMP_CREATE_NS’ 290 | COMP_CREATE_NS(compns, m.getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/FunctionDefinition.h:140, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:454: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/FunctionDefinition.h:140, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:454: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:77, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp:40: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp: In member function ‘void SubmodelReferenceCycles::logCycle(const Model&, std::string, std::string)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp:329:3: note: in expansion of macro ‘COMP_CREATE_NS’ 329 | COMP_CREATE_NS(compns, m.getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/FunctionDefinition.h:140, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:454: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueComponentIds.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp:38: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/FunctionDefinition.h:140, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:454: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueModelIds.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp:38: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniquePortIds.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniquePortIds.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniquePortIds.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniquePortIds.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniquePortIds.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniquePortIds.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/FunctionDefinition.h:140, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:454: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniquePortIds.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniquePortIds.cpp:38: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/FunctionDefinition.h:140, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:454: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniquePortReferences.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp:38: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/FunctionDefinition.h:140, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:454: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/FunctionDefinition.h:140, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:454: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UnitReplacementCheck.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcExtension.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcExtension.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegister.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.cpp:38: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.h:146, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.h:150: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function ‘FluxBound* FbcModelPlugin::createFluxBound()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:683:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 683 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function ‘Objective* FbcModelPlugin::createObjective()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:944:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 944 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function ‘GeneProduct* FbcModelPlugin::createGeneProduct()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1120:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1120 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function ‘GeneAssociation* FbcModelPlugin::createGeneAssociation()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1323:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1323 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function ‘UserDefinedConstraint* FbcModelPlugin::createUserDefinedConstraint()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1558:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1558 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function ‘virtual SBase* FbcModelPlugin::createChildObject(const std::string&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:2029:10: warning: unused variable ‘obj’ [-Wunused-variable] 2029 | SBase* obj = NULL; | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function ‘virtual unsigned int FbcModelPlugin::getNumObjects(const std::string&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:2132:16: warning: unused variable ‘n’ [-Wunused-variable] 2132 | unsigned int n = 0; | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function ‘virtual SBase* FbcModelPlugin::getObject(const std::string&, unsigned int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:2166:10: warning: unused variable ‘obj’ [-Wunused-variable] 2166 | SBase* obj = NULL; | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function ‘virtual SBase* FbcModelPlugin::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:2388:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 2388 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:70, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcReactionPlugin.h:70, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:73: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp: In member function ‘virtual SBase* FbcReactionPlugin::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:153:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 153 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp: In member function ‘GeneProductAssociation* FbcReactionPlugin::createGeneProductAssociation()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:447:3: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 447 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp: In member function ‘virtual SBase* FbcReactionPlugin::createChildObject(const std::string&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:896:10: warning: unused variable ‘obj’ [-Wunused-variable] 896 | SBase* obj = NULL; | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp: In member function ‘virtual unsigned int FbcReactionPlugin::getNumObjects(const std::string&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:918:16: warning: unused variable ‘n’ [-Wunused-variable] 918 | unsigned int n = 0; | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp: In member function ‘virtual SBase* FbcReactionPlugin::getObject(const std::string&, unsigned int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:944:10: warning: unused variable ‘obj’ [-Wunused-variable] 944 | SBase* obj = NULL; | ^~~ [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLDocumentPlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp:35: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSBasePlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSBasePlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSBasePlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSBasePlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcSBasePlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:70, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcSBasePlugin.h:52, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcSBasePlugin.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:73: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcSBasePlugin.cpp: In member function ‘KeyValuePair* FbcSBasePlugin::createKeyValuePair()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcSBasePlugin.cpp:229:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 229 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcSpeciesPlugin.h:90, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Association.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Association.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Association.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Association.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/Association.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/Association.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/Association.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function ‘FbcAnd* FbcAnd::createAnd()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.cpp:301:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 301 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function ‘FbcOr* FbcAnd::createOr()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.cpp:338:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 338 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function ‘GeneProductRef* FbcAnd::createGeneProductRef()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.cpp:375:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 375 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.h:110, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function ‘FbcAnd* ListOfFbcAssociations::createAnd()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:953:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 953 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function ‘FbcOr* ListOfFbcAssociations::createOr()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:990:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 990 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function ‘GeneProductRef* ListOfFbcAssociations::createGeneProductRef()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1027:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1027 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function ‘virtual SBase* ListOfFbcAssociations::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1123:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1123 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1131:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1131 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1139:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1139 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1147:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1147 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcOr.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcOr.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcOr.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function ‘FbcAnd* FbcOr::createAnd()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcOr.cpp:313:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 313 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function ‘FbcOr* FbcOr::createOr()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcOr.cpp:350:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 350 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function ‘GeneProductRef* FbcOr::createGeneProductRef()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcOr.cpp:387:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 387 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FluxBound.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FluxBound.h:131, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FluxBound.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FluxBound.cpp: In member function ‘virtual SBase* ListOfFluxBounds::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FluxBound.cpp:1189:7: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1189 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FluxObjective.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FluxObjective.h:98, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FluxObjective.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FluxObjective.cpp: In member function ‘FluxObjective* ListOfFluxObjectives::createFluxObjective()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FluxObjective.cpp:1385:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1385 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FluxObjective.cpp: In member function ‘virtual SBase* ListOfFluxObjectives::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FluxObjective.cpp:1481:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1481 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneAssociation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneAssociation.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneAssociation.cpp: In member function ‘Association* GeneAssociation::createAssociation()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:355:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 355 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneAssociation.cpp: In member function ‘virtual SBase* ListOfGeneAssociations::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:700:7: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 700 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:94, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.cpp: In member function ‘GeneProduct* ListOfGeneProducts::createGeneProduct()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.cpp:1112:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1112 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.cpp: In member function ‘virtual SBase* ListOfGeneProducts::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.cpp:1208:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1208 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:101, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function ‘virtual FbcAnd* GeneProductAssociation::createAnd()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:218:3: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 218 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function ‘virtual FbcOr* GeneProductAssociation::createOr()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:233:3: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 233 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function ‘virtual GeneProductRef* GeneProductAssociation::createGeneProductRef()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:248:3: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 248 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function ‘virtual SBase* GeneProductAssociation::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:994:3: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 994 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProductRef.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.h:146, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProductRef.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/KeyValuePair.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/KeyValuePair.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/KeyValuePair.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/KeyValuePair.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/KeyValuePair.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/KeyValuePair.h:58, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/KeyValuePair.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/KeyValuePair.cpp: In member function ‘virtual void KeyValuePair::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/KeyValuePair.cpp:879:8: warning: unused variable ‘assigned’ [-Wunused-variable] 879 | bool assigned = false; | ^~~~~~~~ [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfKeyValuePairs.h:58, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp: In member function ‘KeyValuePair* ListOfKeyValuePairs::createKeyValuePair()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp:320:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 320 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp: In member function ‘virtual SBase* ListOfKeyValuePairs::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp:404:3: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 404 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp: In member function ‘virtual void ListOfKeyValuePairs::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp:449:8: warning: unused variable ‘assigned’ [-Wunused-variable] 449 | bool assigned = false; | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp: In member function ‘void ListOfKeyValuePairs::readL3V1V3Attributes(const XMLAttributes&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp:499:16: warning: unused variable ‘pkgVersion’ [-Wunused-variable] 499 | unsigned int pkgVersion = getPackageVersion(); | ^~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp:500:17: warning: unused variable ‘log’ [-Wunused-variable] 500 | SBMLErrorLog* log = getErrorLog(); | ^~~ [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/ListOfUserDefinedConstraintComponents.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/ListOfUserDefinedConstraintComponents.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/ListOfUserDefinedConstraintComponents.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/ListOfUserDefinedConstraintComponents.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraintComponents.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraintComponents.h:59, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraintComponents.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraintComponents.cpp: In member function ‘UserDefinedConstraintComponent* ListOfUserDefinedConstraintComponents::createUserDefinedConstraintComponent()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraintComponents.cpp:270:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 270 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraintComponents.cpp: In member function ‘virtual SBase* ListOfUserDefinedConstraintComponents::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraintComponents.cpp:380:3: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 380 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/ListOfUserDefinedConstraints.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/ListOfUserDefinedConstraints.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/ListOfUserDefinedConstraints.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/ListOfUserDefinedConstraints.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraints.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraints.h:58, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraints.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraints.cpp: In member function ‘UserDefinedConstraint* ListOfUserDefinedConstraints::createUserDefinedConstraint()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraints.cpp:260:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 260 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraints.cpp: In member function ‘virtual SBase* ListOfUserDefinedConstraints::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraints.cpp:405:3: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 405 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Objective.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Objective.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Objective.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Objective.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/Objective.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/Objective.h:139, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/Objective.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/Objective.cpp: In member function ‘FluxObjective* Objective::createFluxObjective()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/Objective.cpp:473:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 473 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/Objective.cpp: In member function ‘Objective* ListOfObjectives::createObjective()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/Objective.cpp:1435:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1435 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/Objective.cpp: In member function ‘virtual SBase* ListOfObjectives::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/Objective.cpp:1554:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1554 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/UserDefinedConstraint.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/UserDefinedConstraint.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/UserDefinedConstraint.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/UserDefinedConstraint.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.h:58, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.cpp: In member function ‘UserDefinedConstraintComponent* UserDefinedConstraint::createUserDefinedConstraintComponent()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.cpp:544:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 544 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.cpp: In member function ‘virtual void UserDefinedConstraint::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.cpp:1353:8: warning: unused variable ‘assigned’ [-Wunused-variable] 1353 | bool assigned = false; | ^~~~~~~~ [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:84, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.cpp: In member function ‘virtual void UserDefinedConstraintComponent::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.cpp:1109:8: warning: unused variable ‘assigned’ [-Wunused-variable] 1109 | bool assigned = false; | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.cpp: In member function ‘void UserDefinedConstraintComponent::readL3V1V3Attributes(const XMLAttributes&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.cpp:1195:16: warning: variable ‘numErrs’ set but not used [-Wunused-but-set-variable] 1195 | unsigned int numErrs; | ^~~~~~~ [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/util/CobraToFbcConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/util/CobraToFbcConverter.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/util/CobraToFbcConverter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/util/CobraToFbcConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util/CobraToFbcConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util/CobraToFbcConverter.h:61, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util/CobraToFbcConverter.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcToCobraConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcToCobraConverter.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcToCobraConverter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcToCobraConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util/FbcToCobraConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util/FbcToCobraConverter.h:61, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util/FbcToCobraConverter.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util/FbcV1ToV2Converter.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp:36: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util/FbcV2ToV1Converter.h:58, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp:36: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints/FbcConsistencyConstraints.cpp:39, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints/FbcIdentifierConsistencyConstraints.cpp:39, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/FbcValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/FbcValidator.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegister.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsExtension.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:70, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsModelPlugin.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:73: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp: In member function ‘Group* GroupsModelPlugin::createGroup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsExtension.h:75:1: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp:234:5: note: in expansion of macro ‘GROUPS_CREATE_NS’ 234 | GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLDocumentPlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.h:62, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Group.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Group.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Group.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Group.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/Group.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/Group.h:169, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/Group.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/Group.cpp: In member function ‘Member* Group::createMember()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsExtension.h:75:1: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/Group.cpp:450:5: note: in expansion of macro ‘GROUPS_CREATE_NS’ 450 | GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfGroups.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfGroups.h:77, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfGroups.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfGroups.cpp: In member function ‘Group* ListOfGroups::createGroup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsExtension.h:75:1: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfGroups.cpp:248:5: note: in expansion of macro ‘GROUPS_CREATE_NS’ 248 | GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfGroups.cpp: In member function ‘virtual SBase* ListOfGroups::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsExtension.h:75:1: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfGroups.cpp:308:3: note: in expansion of macro ‘GROUPS_CREATE_NS’ 308 | GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfMembers.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfMembers.h:105, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfMembers.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfMembers.cpp: In member function ‘Member* ListOfMembers::createMember()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsExtension.h:75:1: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfMembers.cpp:348:5: note: in expansion of macro ‘GROUPS_CREATE_NS’ 348 | GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfMembers.cpp: In member function ‘virtual SBase* ListOfMembers::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsExtension.h:75:1: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfMembers.cpp:459:3: note: in expansion of macro ‘GROUPS_CREATE_NS’ 459 | GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Member.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Member.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Member.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Member.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/Member.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/Member.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/Member.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints/GroupsConsistencyConstraints.cpp:47, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints/GroupsIdentifierConsistencyConstraints.cpp:47, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/GroupsValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/GroupsValidator.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.h:55, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathASTPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathASTPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathASTPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathASTPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathASTPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathASTPlugin.h:50, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathASTPlugin.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathExtension.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathExtension.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegister.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathExtension.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathSBMLDocumentPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathSBMLDocumentPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathSBMLDocumentPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathSBMLDocumentPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathSBMLDocumentPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLDocumentPlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathSBMLDocumentPlugin.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathSBMLDocumentPlugin.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathMathMLConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathMathMLConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathMathMLConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathMathMLConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathMathMLConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathMathMLConsistencyConstraints.cpp:47, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathMathMLConsistencyValidator.cpp:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathUnitConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathUnitConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathUnitConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathUnitConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathUnitConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathUnitConsistencyConstraints.cpp:47, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathUnitConsistencyValidator.cpp:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathValidator.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMArgumentsUnitsCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMArgumentsUnitsCheck.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMArgumentsUnitsCheck.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMArgumentsUnitsCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMArgumentsUnitsCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMArgumentsUnitsCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMNumberArgsMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMNumberArgsMathCheck.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMNumberArgsMathCheck.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMNumberArgsMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMNumberArgsMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMNumberArgsMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathMathMLConsistencyConstraints.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathMathMLConsistencyConstraints.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathMathMLConsistencyConstraints.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathMathMLConsistencyConstraints.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathMathMLConsistencyConstraints.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathMathMLConsistencyConstraints.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathUnitConsistencyConstraints.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathUnitConsistencyConstraints.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathUnitConsistencyConstraints.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathUnitConsistencyConstraints.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathUnitConsistencyConstraints.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathUnitConsistencyConstraints.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutExtension.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutExtension.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegister.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutModelPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutModelPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutModelPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutModelPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:63: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:62: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp: In member function ‘Layout* LayoutModelPlugin::createLayout()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp:481:5: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 481 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLDocumentPlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.h:53, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.h:59: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/BoundingBox.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/BoundingBox.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/sbml/BoundingBox.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/BoundingBox.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/CompartmentGlyph.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/CompartmentGlyph.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/sbml/CompartmentGlyph.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/CompartmentGlyph.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/CubicBezier.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/CubicBezier.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/sbml/CubicBezier.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/CubicBezier.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Curve.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Curve.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Curve.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Curve.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.cpp: In member function ‘LineSegment* Curve::createLineSegment()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.cpp:362:3: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 362 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.cpp: In member function ‘CubicBezier* Curve::createCubicBezier()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.cpp:377:3: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 377 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.cpp: In member function ‘virtual SBase* ListOfLineSegments::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.cpp:645:5: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 645 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Dimensions.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Dimensions.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Dimensions.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Dimensions.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Dimensions.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Dimensions.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Dimensions.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:65: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:329:26: note: by ‘virtual GeneralGlyph& GeneralGlyph::operator=(const GeneralGlyph&)’ 329 | virtual GeneralGlyph& operator=(const GeneralGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.cpp: In member function ‘ReferenceGlyph* GeneralGlyph::createReferenceGlyph()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:648:3: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 648 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.cpp: In member function ‘virtual SBase* ListOfReferenceGlyphs::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:1175:5: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 1175 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:62: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:63: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:329:26: note: by ‘virtual GeneralGlyph& GeneralGlyph::operator=(const GeneralGlyph&)’ 329 | virtual GeneralGlyph& operator=(const GeneralGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.cpp: In member function ‘virtual SBase* ListOfGraphicalObjects::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.cpp:1207:3: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 1207 | LAYOUT_CREATE_NS(layoutns, this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Layout.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Layout.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Layout.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Layout.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Dimensions.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:329:26: note: by ‘virtual GeneralGlyph& GeneralGlyph::operator=(const GeneralGlyph&)’ 329 | virtual GeneralGlyph& operator=(const GeneralGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp: In member function ‘CompartmentGlyph* Layout::createCompartmentGlyph()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp:1367:3: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 1367 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp: In member function ‘SpeciesGlyph* Layout::createSpeciesGlyph()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp:1383:3: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 1383 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp: In member function ‘ReactionGlyph* Layout::createReactionGlyph()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp:1399:3: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 1399 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp: In member function ‘GeneralGlyph* Layout::createGeneralGlyph()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp:1414:3: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 1414 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp: In member function ‘TextGlyph* Layout::createTextGlyph()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp:1430:3: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 1430 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp: In member function ‘GraphicalObject* Layout::createAdditionalGraphicalObject()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp:1447:3: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 1447 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp: In member function ‘virtual SBase* ListOfLayouts::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp:2028:5: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 2028 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp: In member function ‘virtual SBase* ListOfCompartmentGlyphs::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp:2200:5: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 2200 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp: In member function ‘virtual SBase* ListOfSpeciesGlyphs::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp:2352:5: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 2352 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp: In member function ‘virtual SBase* ListOfReactionGlyphs::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp:2501:5: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 2501 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp: In member function ‘virtual SBase* ListOfTextGlyphs::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp:2650:5: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 2650 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/LineSegment.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/LineSegment.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/sbml/LineSegment.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/LineSegment.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Point.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Point.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Point.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Point.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:70, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.cpp: In member function ‘SpeciesReferenceGlyph* ReactionGlyph::createSpeciesReferenceGlyph()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:499:3: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 499 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.cpp: In member function ‘virtual SBase* ListOfSpeciesReferenceGlyphs::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:976:5: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 976 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.cpp:40: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:329:26: note: by ‘virtual GeneralGlyph& GeneralGlyph::operator=(const GeneralGlyph&)’ 329 | virtual GeneralGlyph& operator=(const GeneralGlyph& source); | ^~~~~~~~ [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:58, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.cpp:40: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp:40: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/TextGlyph.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/TextGlyph.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/sbml/TextGlyph.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/TextGlyph.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:59, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/util/LayoutAnnotation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/util/LayoutAnnotation.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/util/LayoutAnnotation.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/util/LayoutAnnotation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.cpp:54: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/util/LayoutUtilities.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/util/LayoutUtilities.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/util/LayoutUtilities.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/util/LayoutUtilities.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/constraints/LayoutConsistencyConstraints.cpp:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/constraints/LayoutConsistencyConstraints.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:62: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:63: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:329:26: note: by ‘virtual GeneralGlyph& GeneralGlyph::operator=(const GeneralGlyph&)’ 329 | virtual GeneralGlyph& operator=(const GeneralGlyph& source); | ^~~~~~~~ [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/constraints/LayoutIdentifierConsistencyConstraints.cpp:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/LayoutValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/LayoutValidator.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/LayoutValidator.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:62: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:63: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:329:26: note: by ‘virtual GeneralGlyph& GeneralGlyph::operator=(const GeneralGlyph&)’ 329 | virtual GeneralGlyph& operator=(const GeneralGlyph& source); | ^~~~~~~~ [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/constraints/UniqueIdsLayout.h:55, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:329:26: note: by ‘virtual GeneralGlyph& GeneralGlyph::operator=(const GeneralGlyph&)’ 329 | virtual GeneralGlyph& operator=(const GeneralGlyph& source); | ^~~~~~~~ [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualExtension.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualExtension.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegister.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualModelPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:70, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualModelPlugin.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualModelPlugin.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:73: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualModelPlugin.cpp: In member function ‘QualitativeSpecies* QualModelPlugin::createQualitativeSpecies()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualModelPlugin.cpp:835:5: note: in expansion of macro ‘QUAL_CREATE_NS’ 835 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualModelPlugin.cpp: In member function ‘Transition* QualModelPlugin::createTransition()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualModelPlugin.cpp:1013:5: note: in expansion of macro ‘QUAL_CREATE_NS’ 1013 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLDocumentPlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualSBMLDocumentPlugin.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.h:77, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.cpp: In member function ‘DefaultTerm* ListOfFunctionTerms::createDefaultTerm()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.cpp:1068:5: note: in expansion of macro ‘QUAL_CREATE_NS’ 1068 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.cpp: In member function ‘virtual SBase* ListOfFunctionTerms::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.cpp:1125:3: note: in expansion of macro ‘QUAL_CREATE_NS’ 1125 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Input.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Input.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Input.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Input.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Input.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Input.h:107, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Input.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Input.cpp: In member function ‘virtual SBase* ListOfInputs::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Input.cpp:1342:5: note: in expansion of macro ‘QUAL_CREATE_NS’ 1342 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Output.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Output.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Output.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Output.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Output.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Output.h:98, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Output.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Output.cpp: In member function ‘virtual SBase* ListOfOutputs::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Output.cpp:1245:5: note: in expansion of macro ‘QUAL_CREATE_NS’ 1245 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.h:89, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp: In member function ‘virtual SBase* ListOfQualitativeSpecies::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp:1338:5: note: in expansion of macro ‘QUAL_CREATE_NS’ 1338 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Transition.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Transition.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Transition.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Transition.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Transition.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Transition.h:91, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Transition.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Transition.cpp: In member function ‘Input* Transition::createInput()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Transition.cpp:456:5: note: in expansion of macro ‘QUAL_CREATE_NS’ 456 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Transition.cpp: In member function ‘Output* Transition::createOutput()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Transition.cpp:636:5: note: in expansion of macro ‘QUAL_CREATE_NS’ 636 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Transition.cpp: In member function ‘FunctionTerm* Transition::createFunctionTerm()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Transition.cpp:790:5: note: in expansion of macro ‘QUAL_CREATE_NS’ 790 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Transition.cpp: In member function ‘virtual SBase* ListOfTransitions::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Transition.cpp:1755:5: note: in expansion of macro ‘QUAL_CREATE_NS’ 1755 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/QualConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/QualConsistencyConstraints.cpp:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/QualConsistencyValidator.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/QualIdentifierConsistencyConstraints.cpp:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/QualMathConsistencyConstraints.cpp:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/QualValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/QualValidator.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.h:55, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.h:55, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderExtension.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderExtension.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegister.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.cpp:36: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderGraphicalObjectPlugin.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCubicBezier.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common/RenderExtensionTypes.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp: In member function ‘LocalRenderInformation* RenderLayoutPlugin::createLocalRenderInformation()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp:450:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 450 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:62: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:63: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:329:26: note: by ‘virtual GeneralGlyph& GeneralGlyph::operator=(const GeneralGlyph&)’ 329 | virtual GeneralGlyph& operator=(const GeneralGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp: In member function ‘GlobalRenderInformation* RenderListOfLayoutsPlugin::createGlobalRenderInformation()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp:713:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 713 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLDocumentPlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderSBMLDocumentPlugin.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ColorDefinition.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ColorDefinition.cpp:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/DefaultValues.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/DefaultValues.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/DefaultValues.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/DefaultValues.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/DefaultValues.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GradientBase.h:102, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/DefaultValues.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/DefaultValues.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Ellipse.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Ellipse.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/Ellipse.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Ellipse.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Ellipse.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Ellipse.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Ellipse.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Ellipse.cpp:65: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderInformationBase.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GlobalRenderInformation.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp: In member function ‘GlobalStyle* GlobalRenderInformation::createGlobalStyle()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp:365:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 365 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GlobalStyle.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GlobalStyle.h:74, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GlobalStyle.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GlobalStyle.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientBase.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientBase.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GradientBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GradientBase.h:102, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GradientBase.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GradientBase.cpp: In member function ‘GradientStop* GradientBase::createGradientStop()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GradientBase.cpp:565:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 565 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientStop.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientStop.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientStop.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientStop.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GradientStop.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GradientStop.h:84, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GradientStop.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GradientStop.cpp:56: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Image.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Image.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/Image.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Image.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Image.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Transformation.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Transformation2D.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Image.h:76, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Image.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Image.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LineEnding.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LineEnding.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/LineEnding.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LineEnding.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LineEnding.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LineEnding.h:77, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LineEnding.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LineEnding.cpp: In member function ‘RenderGroup* LineEnding::createGroup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LineEnding.cpp:540:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 540 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LineEnding.cpp: In member function ‘BoundingBox* LineEnding::createBoundingBox()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LineEnding.cpp:566:3: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 566 | LAYOUT_CREATE_NS(layoutns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LineEnding.cpp: In member function ‘virtual SBase* LineEnding::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LineEnding.cpp:1320:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 1320 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LineEnding.cpp:1322:3: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 1322 | LAYOUT_CREATE_NS(layoutns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LineEnding.cpp: In member function ‘virtual void LineEnding::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LineEnding.cpp:1494:47: warning: ‘numErrs’ may be used uninitialized [-Wmaybe-uninitialized] 1494 | if (log && log->getNumErrors() == numErrs + 1 && | ~~~~~~~~^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LineEnding.cpp:1398:16: note: ‘numErrs’ was declared here 1398 | unsigned int numErrs; | ^~~~~~~ [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LinearGradient.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LinearGradient.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/LinearGradient.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LinearGradient.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LinearGradient.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GradientBase.h:102, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LinearGradient.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LinearGradient.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LinearGradient.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfColorDefinitions.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:38: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp: In member function ‘ColorDefinition* ListOfColorDefinitions::createColorDefinition()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:295:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 295 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp: In member function ‘virtual SBase* ListOfColorDefinitions::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:367:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 367 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCubicBezier.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.h:75: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.cpp: In member function ‘RenderCubicBezier* ListOfCurveElements::createCubicBezier()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:324:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 324 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.cpp: In member function ‘virtual SBase* ListOfCurveElements::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:413:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 413 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function ‘Image* ListOfDrawables::createImage()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp:261:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 261 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function ‘Ellipse* ListOfDrawables::createEllipse()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp:289:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 289 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function ‘Rectangle* ListOfDrawables::createRectangle()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp:317:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 317 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function ‘Polygon* ListOfDrawables::createPolygon()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp:345:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 345 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function ‘RenderGroup* ListOfDrawables::createGroup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp:373:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 373 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function ‘LineEnding* ListOfDrawables::createLineEnding()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp:401:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 401 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function ‘Text* ListOfDrawables::createText()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp:429:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 429 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function ‘RenderCurve* ListOfDrawables::createCurve()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp:457:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 457 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function ‘virtual SBase* ListOfDrawables::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp:517:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 517 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.h:70, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function ‘DefaultValues* ListOfGlobalRenderInformation::createDefaultValues()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:429:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 429 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function ‘GlobalRenderInformation* ListOfGlobalRenderInformation::createGlobalRenderInformation()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:605:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 605 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function ‘virtual SBase* ListOfGlobalRenderInformation::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:842:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 842 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function ‘virtual void ListOfGlobalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:940:40: warning: ‘numErrs’ may be used uninitialized [-Wmaybe-uninitialized] 940 | if (log->getNumErrors() == numErrs + 1 && | ~~~~~~~~^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:898:16: note: ‘numErrs’ was declared here 898 | unsigned int numErrs; | ^~~~~~~ [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalStyles.h:70, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp: In member function ‘GlobalStyle* ListOfGlobalStyles::createGlobalStyle()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:283:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 283 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp: In member function ‘virtual SBase* ListOfGlobalStyles::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:348:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 348 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientDefinitions.h:70, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:38: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function ‘LinearGradient* ListOfGradientDefinitions::createLinearGradient()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:306:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 306 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function ‘RadialGradient* ListOfGradientDefinitions::createRadialGradient()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:335:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 335 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function ‘virtual SBase* ListOfGradientDefinitions::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:395:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 395 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientStops.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientStops.h:84, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientStops.cpp: In member function ‘GradientStop* ListOfGradientStops::createGradientStop()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:304:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 304 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientStops.cpp: In member function ‘virtual SBase* ListOfGradientStops::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:364:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 364 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLineEndings.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLineEndings.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:38: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLineEndings.cpp: In member function ‘LineEnding* ListOfLineEndings::createLineEnding()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:295:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 295 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLineEndings.cpp: In member function ‘virtual SBase* ListOfLineEndings::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:369:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 369 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function ‘DefaultValues* ListOfLocalRenderInformation::createDefaultValues()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:426:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 426 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function ‘LocalRenderInformation* ListOfLocalRenderInformation::createLocalRenderInformation()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:586:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 586 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function ‘virtual SBase* ListOfLocalRenderInformation::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:792:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 792 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function ‘virtual void ListOfLocalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:890:40: warning: ‘numErrs’ may be used uninitialized [-Wmaybe-uninitialized] 890 | if (log->getNumErrors() == numErrs + 1 && | ~~~~~~~~^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:848:16: note: ‘numErrs’ was declared here 848 | unsigned int numErrs; | ^~~~~~~ [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalStyles.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp: In member function ‘LocalStyle* ListOfLocalStyles::createLocalStyle()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:299:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 299 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp: In member function ‘virtual SBase* ListOfLocalStyles::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:364:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 364 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LocalRenderInformation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderInformationBase.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LocalRenderInformation.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:56: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LocalRenderInformation.cpp: In member function ‘LocalStyle* LocalRenderInformation::createLocalStyle()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:339:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 339 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LocalRenderInformation.cpp: In member function ‘LocalStyle* LocalRenderInformation::createStyle(const std::string&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:363:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 363 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalStyle.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalStyle.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalStyle.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalStyle.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LocalStyle.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LocalStyle.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LocalStyle.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LocalStyle.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LocalStyle.cpp:59: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Polygon.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Polygon.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/Polygon.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Polygon.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCubicBezier.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.h:75: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.cpp: In constructor ‘Polygon::Polygon(const XMLNode&, unsigned int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.cpp:124:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 124 | RENDER_CREATE_NS(renderns, this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.cpp: In member function ‘RenderPoint* Polygon::createPoint()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.cpp:421:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 421 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.cpp: In member function ‘RenderCubicBezier* Polygon::createCubicBezier()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.cpp:449:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 449 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RadialGradient.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RadialGradient.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/RadialGradient.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RadialGradient.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RadialGradient.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GradientBase.h:102, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RadialGradient.h:80, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RadialGradient.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RadialGradient.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Rectangle.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Rectangle.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/Rectangle.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Rectangle.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Rectangle.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Rectangle.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Rectangle.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Rectangle.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RelAbsVector.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RelAbsVector.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/RelAbsVector.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RelAbsVector.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RelAbsVector.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RelAbsVector.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RelAbsVector.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCubicBezier.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCubicBezier.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCubicBezier.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCubicBezier.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCurve.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCurve.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCurve.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCurve.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCurve.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Dimensions.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCurve.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCurve.cpp: In member function ‘RenderPoint* RenderCurve::createPoint()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCurve.cpp:473:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 473 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCurve.cpp: In member function ‘RenderCubicBezier* RenderCurve::createCubicBezier()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCurve.cpp:501:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 501 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderGroup.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderGroup.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderGroup.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderGroup.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.h:76, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCubicBezier.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp:56: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp:65: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function ‘Image* RenderGroup::createImage()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp:1110:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 1110 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function ‘Ellipse* RenderGroup::createEllipse()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp:1138:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 1138 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function ‘Rectangle* RenderGroup::createRectangle()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp:1166:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 1166 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function ‘Polygon* RenderGroup::createPolygon()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp:1194:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 1194 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function ‘RenderGroup* RenderGroup::createGroup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp:1222:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 1222 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function ‘LineEnding* RenderGroup::createLineEnding()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp:1250:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 1250 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function ‘Text* RenderGroup::createText()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp:1278:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 1278 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function ‘RenderCurve* RenderGroup::createCurve()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp:1306:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 1306 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function ‘void RenderGroup::importOldCurve(const XMLNode&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp:2623:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 2623 | RENDER_CREATE_NS(renderns, this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderInformationBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderInformationBase.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderInformationBase.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function ‘ColorDefinition* RenderInformationBase::createColorDefinition()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderInformationBase.cpp:734:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 734 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function ‘LinearGradient* RenderInformationBase::createLinearGradientDefinition()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderInformationBase.cpp:892:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 892 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function ‘RadialGradient* RenderInformationBase::createRadialGradientDefinition()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderInformationBase.cpp:920:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 920 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function ‘LineEnding* RenderInformationBase::createLineEnding()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderInformationBase.cpp:1078:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 1078 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderPoint.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderPoint.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderPoint.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderPoint.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderPoint.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderPoint.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderPoint.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCubicBezier.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderPoint.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderPoint.cpp:61: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Style.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Style.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/Style.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Style.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.cpp: In member function ‘bool Style::isSetGroup() const’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.cpp:564:19: warning: the address of ‘Style::mGroup’ will never be NULL [-Waddress] 564 | return (&mGroup != NULL); | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.h:92:15: note: ‘Style::mGroup’ declared here 92 | RenderGroup mGroup; | ^~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.cpp: In member function ‘RenderGroup* Style::createGroup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.cpp:597:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 597 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.cpp: In member function ‘virtual SBase* Style::getElementBySId(const std::string&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.cpp:1179:15: warning: the address of ‘Style::mGroup’ will never be NULL [-Waddress] 1179 | if (&mGroup != NULL) | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.h:92:15: note: ‘Style::mGroup’ declared here 92 | RenderGroup mGroup; | ^~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.cpp: In member function ‘virtual SBase* Style::getElementByMetaId(const std::string&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.cpp:1211:15: warning: the address of ‘Style::mGroup’ will never be NULL [-Waddress] 1211 | if (&mGroup != NULL) | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.h:92:15: note: ‘Style::mGroup’ declared here 92 | RenderGroup mGroup; | ^~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.cpp: In member function ‘virtual SBase* Style::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.cpp:1270:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 1270 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Text.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Text.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/Text.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Text.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Text.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Text.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Text.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Text.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Transformation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Transformation.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Transformation.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation2D.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation2D.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation2D.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation2D.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Transformation2D.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Transformation.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Transformation2D.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Transformation2D.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util/RenderLayoutConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util/RenderLayoutConverter.h:62, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util/RenderLayoutConverter.cpp:36: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCubicBezier.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common/RenderExtensionTypes.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util/RenderLayoutConverter.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util/RenderLayoutConverter.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:62: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:63: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:329:26: note: by ‘virtual GeneralGlyph& GeneralGlyph::operator=(const GeneralGlyph&)’ 329 | virtual GeneralGlyph& operator=(const GeneralGlyph& source); | ^~~~~~~~ [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/util/RenderUtilities.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/util/RenderUtilities.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/util/RenderUtilities.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/util/RenderUtilities.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util/RenderUtilities.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common/RenderExtensionTypes.h:50, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util/RenderUtilities.h:40, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util/RenderUtilities.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCubicBezier.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common/RenderExtensionTypes.h:75: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util/RenderUtilities.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:62: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:63: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:329:26: note: by ‘virtual GeneralGlyph& GeneralGlyph::operator=(const GeneralGlyph&)’ 329 | virtual GeneralGlyph& operator=(const GeneralGlyph& source); | ^~~~~~~~ [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/RenderConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints/RenderConsistencyConstraints.cpp:43, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/RenderConsistencyValidator.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints/RenderIdentifierConsistencyConstraints.cpp:43, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/RenderValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/RenderValidator.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/annotation/CVTerm.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/annotation/CVTerm.cpp.o -MF CMakeFiles/sbml.dir/sbml/annotation/CVTerm.cpp.o.d -o CMakeFiles/sbml.dir/sbml/annotation/CVTerm.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/CVTerm.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/CVTerm.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/CVTerm.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/annotation/Date.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/annotation/Date.cpp.o -MF CMakeFiles/sbml.dir/sbml/annotation/Date.cpp.o.d -o CMakeFiles/sbml.dir/sbml/annotation/Date.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp: In member function ‘void Date::parseDateNumbersToString()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:463:29: warning: ‘%u’ directive output may be truncated writing between 2 and 10 bytes into a region of size between 0 and 8 [-Wformat-truncation=] 463 | snprintf(cdate, 10, "%u-%u-", mYear, mMonth); | ^~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:463:25: note: directive argument in the range [10, 4294967295] 463 | snprintf(cdate, 10, "%u-%u-", mYear, mMonth); | ^~~~~~~~ In file included from /usr/include/stdio.h:970, from /usr/include/c++/15/cstdio:47, from /usr/include/c++/15/ext/string_conversions.h:47, from /usr/include/c++/15/bits/basic_string.h:4444, from /usr/include/c++/15/string:56, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLAttributes.h:243, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLToken.h:126, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLNode.h:160, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.h:193, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:39: In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘void Date::parseDateNumbersToString()’ at /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:463:13: /usr/include/riscv64-linux-gnu/bits/stdio2.h:68:35: note: ‘__builtin___snprintf_chk’ output between 6 and 23 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp: In member function ‘void Date::parseDateNumbersToString()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:469:28: warning: ‘T’ directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] 469 | snprintf(cdate, 10, "%uT", mDay); | ^ In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘void Date::parseDateNumbersToString()’ at /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:469:13: /usr/include/riscv64-linux-gnu/bits/stdio2.h:68:35: note: ‘__builtin___snprintf_chk’ output between 4 and 12 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp: In member function ‘void Date::parseDateNumbersToString()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:475:28: warning: ‘:’ directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] 475 | snprintf(cdate, 10, "%u:", mHour); | ^ In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘void Date::parseDateNumbersToString()’ at /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:475:13: /usr/include/riscv64-linux-gnu/bits/stdio2.h:68:35: note: ‘__builtin___snprintf_chk’ output between 4 and 12 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp: In member function ‘void Date::parseDateNumbersToString()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:481:28: warning: ‘:’ directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] 481 | snprintf(cdate, 10, "%u:", mMinute); | ^ In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘void Date::parseDateNumbersToString()’ at /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:481:13: /usr/include/riscv64-linux-gnu/bits/stdio2.h:68:35: note: ‘__builtin___snprintf_chk’ output between 4 and 12 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp: In member function ‘void Date::parseDateNumbersToString()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:487:28: warning: ‘__builtin___snprintf_chk’ output may be truncated before the last format character [-Wformat-truncation=] 487 | snprintf(cdate, 10, "%u", mSecond); | ^ In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘void Date::parseDateNumbersToString()’ at /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:487:13: /usr/include/riscv64-linux-gnu/bits/stdio2.h:68:35: note: ‘__builtin___snprintf_chk’ output between 3 and 11 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp: In member function ‘void Date::parseDateNumbersToString()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:506:30: warning: ‘:’ directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] 506 | snprintf(cdate, 10, "%u:", mHoursOffset); | ^ In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘void Date::parseDateNumbersToString()’ at /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:506:15: /usr/include/riscv64-linux-gnu/bits/stdio2.h:68:35: note: ‘__builtin___snprintf_chk’ output between 4 and 12 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp: In member function ‘void Date::parseDateNumbersToString()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:512:30: warning: ‘__builtin___snprintf_chk’ output may be truncated before the last format character [-Wformat-truncation=] 512 | snprintf(cdate, 10, "%u", mMinutesOffset); | ^ In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘void Date::parseDateNumbersToString()’ at /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:512:15: /usr/include/riscv64-linux-gnu/bits/stdio2.h:68:35: note: ‘__builtin___snprintf_chk’ output between 3 and 11 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/annotation/ModelCreator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/annotation/ModelCreator.cpp.o -MF CMakeFiles/sbml.dir/sbml/annotation/ModelCreator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/annotation/ModelCreator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/ModelCreator.cpp [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/annotation/ModelHistory.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/annotation/ModelHistory.cpp.o -MF CMakeFiles/sbml.dir/sbml/annotation/ModelHistory.cpp.o.d -o CMakeFiles/sbml.dir/sbml/annotation/ModelHistory.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/ModelHistory.cpp [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/annotation/RDFAnnotationParser.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/annotation/RDFAnnotationParser.cpp.o -MF CMakeFiles/sbml.dir/sbml/annotation/RDFAnnotationParser.cpp.o.d -o CMakeFiles/sbml.dir/sbml/annotation/RDFAnnotationParser.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/RDFAnnotationParser.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/RDFAnnotationParser.cpp:40: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/RDFAnnotationParser.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/common/libsbml-version.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/common/libsbml-version.cpp.o -MF CMakeFiles/sbml.dir/sbml/common/libsbml-version.cpp.o.d -o CMakeFiles/sbml.dir/sbml/common/libsbml-version.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/common/libsbml-version.cpp [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/common/operationReturnValues.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/common/operationReturnValues.cpp.o -MF CMakeFiles/sbml.dir/sbml/common/operationReturnValues.cpp.o.d -o CMakeFiles/sbml.dir/sbml/common/operationReturnValues.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/common/operationReturnValues.cpp [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/ConversionOption.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/ConversionOption.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/ConversionOption.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/ConversionOption.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/ConversionOption.cpp [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/ConversionProperties.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/ConversionProperties.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/ConversionProperties.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/ConversionProperties.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/ConversionProperties.cpp [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/ExpressionAnalyser.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/ExpressionAnalyser.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/ExpressionAnalyser.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/ExpressionAnalyser.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/ExpressionAnalyser.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/ExpressionAnalyser.h:58, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/ExpressionAnalyser.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/ExpressionAnalyser.cpp: In member function ‘void ExpressionAnalyser::detectHiddenSpecies(List*)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/ExpressionAnalyser.cpp:414:14: warning: unused variable ‘currentNode’ [-Wunused-variable] 414 | ASTNode* currentNode = exp->current; | ^~~~~~~~~~~ [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/RegisterConverters.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/RegisterConverters.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/RegisterConverters.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/RegisterConverters.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/RegisterConverters.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLFunctionDefinitionConverter.h:85, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/RegisterConverters.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/SBMLConverter.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/SBMLConverter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/SBMLConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLConverterRegistry.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/SBMLConverterRegistry.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/SBMLConverterRegistry.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/SBMLConverterRegistry.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverterRegistry.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverterRegistry.h:70, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverterRegistry.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLFunctionDefinitionConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLFunctionDefinitionConverter.h:85, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLFunctionDefinitionConverter.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLIdConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/SBMLIdConverter.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/SBMLIdConverter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/SBMLIdConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLIdConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLIdConverter.h:87, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLIdConverter.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLInferUnitsConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLInferUnitsConverter.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLInferUnitsConverter.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLInitialAssignmentConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLInitialAssignmentConverter.h:98, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLInitialAssignmentConverter.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLLevel1Version1Converter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLLevel1Version1Converter.h:92, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLLevel1Version1Converter.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLLevelVersionConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLLevelVersionConverter.h:94, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLLevelVersionConverter.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLLevelVersionConverter.cpp:54: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLLocalParameterConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLLocalParameterConverter.h:74, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLLocalParameterConverter.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLRateOfConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/SBMLRateOfConverter.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/SBMLRateOfConverter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/SBMLRateOfConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLRateOfConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLRateOfConverter.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLRateOfConverter.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLRateRuleConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/SBMLRateRuleConverter.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/SBMLRateRuleConverter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/SBMLRateRuleConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLRateRuleConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLRateRuleConverter.h:62, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLRateRuleConverter.cpp:36: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLReactionConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/SBMLReactionConverter.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/SBMLReactionConverter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/SBMLReactionConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLReactionConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLReactionConverter.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLReactionConverter.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLRuleConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/SBMLRuleConverter.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/SBMLRuleConverter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/SBMLRuleConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLRuleConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLRuleConverter.h:97, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLRuleConverter.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLStripPackageConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLStripPackageConverter.h:81, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLStripPackageConverter.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLUnitsConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/SBMLUnitsConverter.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/SBMLUnitsConverter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/SBMLUnitsConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLUnitsConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLUnitsConverter.h:80, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLUnitsConverter.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/ASTBasePlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/extension/ASTBasePlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/extension/ASTBasePlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/extension/ASTBasePlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h: In copy constructor ‘ASTBasePlugin::ASTBasePlugin(const ASTBasePlugin&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:487:24: warning: ‘ASTBasePlugin::mExtendedMathType’ will be initialized after [-Wreorder] 487 | ExtendedMathType_t mExtendedMathType; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:486:34: warning: ‘std::vector ASTBasePlugin::mPkgASTNodeValues’ [-Wreorder] 486 | std::vector mPkgASTNodeValues; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.cpp:314:1: warning: when initialized here [-Wreorder] 314 | ASTBasePlugin::ASTBasePlugin(const ASTBasePlugin& orig) | ^~~~~~~~~~~~~ [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o -MF CMakeFiles/sbml.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o.d -o CMakeFiles/sbml.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ISBMLExtensionNamespaces.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegistry.h:59, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ISBMLExtensionNamespaces.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLDocumentPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLDocumentPlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLDocumentPlugin.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o -MF CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o.d -o CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLDocumentPluginNotRequired.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLDocumentPlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLDocumentPluginNotRequired.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLDocumentPluginNotRequired.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtension.cpp.o -MF CMakeFiles/sbml.dir/sbml/extension/SBMLExtension.cpp.o.d -o CMakeFiles/sbml.dir/sbml/extension/SBMLExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionException.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionException.cpp.o -MF CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionException.cpp.o.d -o CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionException.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionException.cpp [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o -MF CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o.d -o CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionNamespaces.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegistry.h:59, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionNamespaces.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionRegistry.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionRegistry.cpp.o -MF CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionRegistry.cpp.o.d -o CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionRegistry.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegistry.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegistry.h:59, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegistry.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegistry.cpp: In member function ‘bool SBMLExtensionRegistry::setEnabled(const std::string&, bool)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegistry.cpp:368:42: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 368 | return (sbmlext) ? sbmlext->mIsEnabled = isEnabled : false; | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegistry.cpp:368:42: warning: suggest parentheses around assignment used as truth value [-Wparentheses] [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBaseExtensionPoint.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/extension/SBaseExtensionPoint.cpp.o -MF CMakeFiles/sbml.dir/sbml/extension/SBaseExtensionPoint.cpp.o.d -o CMakeFiles/sbml.dir/sbml/extension/SBaseExtensionPoint.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBaseExtensionPoint.cpp [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBasePlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/extension/SBasePlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/extension/SBasePlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/extension/SBasePlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:70, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBasePluginCreatorBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/extension/SBasePluginCreatorBase.cpp.o -MF CMakeFiles/sbml.dir/sbml/extension/SBasePluginCreatorBase.cpp.o.d -o CMakeFiles/sbml.dir/sbml/extension/SBasePluginCreatorBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/AlgebraicRule.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/AlgebraicRule.cpp.o -MF CMakeFiles/sbml.dir/sbml/AlgebraicRule.cpp.o.d -o CMakeFiles/sbml.dir/sbml/AlgebraicRule.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/AlgebraicRule.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/AlgebraicRule.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/AssignmentRule.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/AssignmentRule.cpp.o -MF CMakeFiles/sbml.dir/sbml/AssignmentRule.cpp.o.d -o CMakeFiles/sbml.dir/sbml/AssignmentRule.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/AssignmentRule.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/AssignmentRule.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Compartment.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/Compartment.cpp.o -MF CMakeFiles/sbml.dir/sbml/Compartment.cpp.o.d -o CMakeFiles/sbml.dir/sbml/Compartment.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Compartment.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Compartment.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/CompartmentType.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/CompartmentType.cpp.o -MF CMakeFiles/sbml.dir/sbml/CompartmentType.cpp.o.d -o CMakeFiles/sbml.dir/sbml/CompartmentType.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/CompartmentType.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/CompartmentType.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Constraint.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/Constraint.cpp.o -MF CMakeFiles/sbml.dir/sbml/Constraint.cpp.o.d -o CMakeFiles/sbml.dir/sbml/Constraint.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Constraint.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Constraint.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Delay.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/Delay.cpp.o -MF CMakeFiles/sbml.dir/sbml/Delay.cpp.o.d -o CMakeFiles/sbml.dir/sbml/Delay.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Delay.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Delay.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Event.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/Event.cpp.o -MF CMakeFiles/sbml.dir/sbml/Event.cpp.o.d -o CMakeFiles/sbml.dir/sbml/Event.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Event.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Event.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/EventAssignment.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/EventAssignment.cpp.o -MF CMakeFiles/sbml.dir/sbml/EventAssignment.cpp.o.d -o CMakeFiles/sbml.dir/sbml/EventAssignment.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/EventAssignment.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/EventAssignment.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/ExpectedAttributes.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/ExpectedAttributes.cpp.o -MF CMakeFiles/sbml.dir/sbml/ExpectedAttributes.cpp.o.d -o CMakeFiles/sbml.dir/sbml/ExpectedAttributes.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/ExpectedAttributes.cpp [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/FunctionDefinition.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/FunctionDefinition.cpp.o -MF CMakeFiles/sbml.dir/sbml/FunctionDefinition.cpp.o.d -o CMakeFiles/sbml.dir/sbml/FunctionDefinition.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/FunctionDefinition.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/FunctionDefinition.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/InitialAssignment.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/InitialAssignment.cpp.o -MF CMakeFiles/sbml.dir/sbml/InitialAssignment.cpp.o.d -o CMakeFiles/sbml.dir/sbml/InitialAssignment.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/InitialAssignment.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/InitialAssignment.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/KineticLaw.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/KineticLaw.cpp.o -MF CMakeFiles/sbml.dir/sbml/KineticLaw.cpp.o.d -o CMakeFiles/sbml.dir/sbml/KineticLaw.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/KineticLaw.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/KineticLaw.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/ListOf.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/ListOf.cpp.o -MF CMakeFiles/sbml.dir/sbml/ListOf.cpp.o.d -o CMakeFiles/sbml.dir/sbml/ListOf.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/ListOf.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:70, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/ListOf.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/LocalParameter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/LocalParameter.cpp.o -MF CMakeFiles/sbml.dir/sbml/LocalParameter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/LocalParameter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/LocalParameter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/LocalParameter.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Model.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/Model.cpp.o -MF CMakeFiles/sbml.dir/sbml/Model.cpp.o.d -o CMakeFiles/sbml.dir/sbml/Model.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.cpp: In member function ‘void Model::createConstraintUnitsData(UnitFormulaFormatter*)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.cpp:6447:32: warning: ‘%u’ directive writing between 1 and 10 bytes into a region of size 4 [-Wformat-overflow=] 6447 | sprintf(newId, "constraint_%u", n); | ^~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.cpp:6447:20: note: directive argument in the range [0, 4294967294] 6447 | sprintf(newId, "constraint_%u", n); | ^~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:970, from /usr/include/c++/15/cstdio:47, from /usr/include/c++/15/ext/string_conversions.h:47, from /usr/include/c++/15/bits/basic_string.h:4444, from /usr/include/c++/15/string:56, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLAttributes.h:243, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLToken.h:126, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLNode.h:160, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.cpp:42: In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘void Model::createConstraintUnitsData(UnitFormulaFormatter*)’ at /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.cpp:6447:12: /usr/include/riscv64-linux-gnu/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output between 13 and 22 bytes into a destination of size 15 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.cpp: In member function ‘void Model::createEventUnitsData(UnitFormulaFormatter*)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.cpp:6650:27: warning: ‘%u’ directive writing between 1 and 10 bytes into a region of size 6 [-Wformat-overflow=] 6650 | sprintf(newId, "event_%u", countEvents); | ^~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.cpp:6650:20: note: directive argument in the range [0, 4294967294] 6650 | sprintf(newId, "event_%u", countEvents); | ^~~~~~~~~~ In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘void Model::createEventUnitsData(UnitFormulaFormatter*)’ at /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.cpp:6650:12: /usr/include/riscv64-linux-gnu/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output between 8 and 17 bytes into a destination of size 12 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/ModifierSpeciesReference.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/ModifierSpeciesReference.cpp.o -MF CMakeFiles/sbml.dir/sbml/ModifierSpeciesReference.cpp.o.d -o CMakeFiles/sbml.dir/sbml/ModifierSpeciesReference.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/ModifierSpeciesReference.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/ModifierSpeciesReference.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Parameter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/Parameter.cpp.o -MF CMakeFiles/sbml.dir/sbml/Parameter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/Parameter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Parameter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Parameter.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 21%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Priority.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/Priority.cpp.o -MF CMakeFiles/sbml.dir/sbml/Priority.cpp.o.d -o CMakeFiles/sbml.dir/sbml/Priority.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Priority.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Priority.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 21%] Building CXX object src/CMakeFiles/sbml.dir/sbml/RateRule.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/RateRule.cpp.o -MF CMakeFiles/sbml.dir/sbml/RateRule.cpp.o.d -o CMakeFiles/sbml.dir/sbml/RateRule.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/RateRule.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/RateRule.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 21%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Reaction.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/Reaction.cpp.o -MF CMakeFiles/sbml.dir/sbml/Reaction.cpp.o.d -o CMakeFiles/sbml.dir/sbml/Reaction.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Reaction.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Reaction.cpp:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 21%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Rule.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/Rule.cpp.o -MF CMakeFiles/sbml.dir/sbml/Rule.cpp.o.d -o CMakeFiles/sbml.dir/sbml/Rule.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Rule.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Rule.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 21%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLConstructorException.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/SBMLConstructorException.cpp.o -MF CMakeFiles/sbml.dir/sbml/SBMLConstructorException.cpp.o.d -o CMakeFiles/sbml.dir/sbml/SBMLConstructorException.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLConstructorException.cpp [ 21%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLConvert.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/SBMLConvert.cpp.o -MF CMakeFiles/sbml.dir/sbml/SBMLConvert.cpp.o.d -o CMakeFiles/sbml.dir/sbml/SBMLConvert.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLConvert.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLConvert.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 21%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLDocument.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/SBMLDocument.cpp.o -MF CMakeFiles/sbml.dir/sbml/SBMLDocument.cpp.o.d -o CMakeFiles/sbml.dir/sbml/SBMLDocument.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBMLValidator.h:84, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBMLInternalValidator.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.cpp:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 21%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLError.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/SBMLError.cpp.o -MF CMakeFiles/sbml.dir/sbml/SBMLError.cpp.o.d -o CMakeFiles/sbml.dir/sbml/SBMLError.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLError.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegistry.h:59, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLError.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 21%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLErrorLog.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/SBMLErrorLog.cpp.o -MF CMakeFiles/sbml.dir/sbml/SBMLErrorLog.cpp.o.d -o CMakeFiles/sbml.dir/sbml/SBMLErrorLog.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 21%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLNamespaces.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/SBMLNamespaces.cpp.o -MF CMakeFiles/sbml.dir/sbml/SBMLNamespaces.cpp.o.d -o CMakeFiles/sbml.dir/sbml/SBMLNamespaces.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLNamespaces.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegistry.h:59, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLNamespaces.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 21%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLReader.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/SBMLReader.cpp.o -MF CMakeFiles/sbml.dir/sbml/SBMLReader.cpp.o.d -o CMakeFiles/sbml.dir/sbml/SBMLReader.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLReader.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLReader.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLReader.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 21%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLTransforms.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/SBMLTransforms.cpp.o -MF CMakeFiles/sbml.dir/sbml/SBMLTransforms.cpp.o.d -o CMakeFiles/sbml.dir/sbml/SBMLTransforms.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLTypeCodes.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/SBMLTypeCodes.cpp.o -MF CMakeFiles/sbml.dir/sbml/SBMLTypeCodes.cpp.o.d -o CMakeFiles/sbml.dir/sbml/SBMLTypeCodes.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypeCodes.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypeCodes.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLVisitor.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/SBMLVisitor.cpp.o -MF CMakeFiles/sbml.dir/sbml/SBMLVisitor.cpp.o.d -o CMakeFiles/sbml.dir/sbml/SBMLVisitor.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLVisitor.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLVisitor.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLWriter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/SBMLWriter.cpp.o -MF CMakeFiles/sbml.dir/sbml/SBMLWriter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/SBMLWriter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLWriter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLWriter.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBO.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/SBO.cpp.o -MF CMakeFiles/sbml.dir/sbml/SBO.cpp.o.d -o CMakeFiles/sbml.dir/sbml/SBO.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBO.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBO.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBO.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/SBase.cpp.o -MF CMakeFiles/sbml.dir/sbml/SBase.cpp.o.d -o CMakeFiles/sbml.dir/sbml/SBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.cpp:58: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.cpp: In member function ‘virtual int SBase::setAnnotation(const XMLNode*)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.cpp:1398:8: warning: variable ‘hasNestedTerms’ set but not used [-Wunused-but-set-variable] 1398 | bool hasNestedTerms = false; | ^~~~~~~~~~~~~~ [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SimpleSpeciesReference.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/SimpleSpeciesReference.cpp.o -MF CMakeFiles/sbml.dir/sbml/SimpleSpeciesReference.cpp.o.d -o CMakeFiles/sbml.dir/sbml/SimpleSpeciesReference.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SimpleSpeciesReference.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SimpleSpeciesReference.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Species.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/Species.cpp.o -MF CMakeFiles/sbml.dir/sbml/Species.cpp.o.d -o CMakeFiles/sbml.dir/sbml/Species.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Species.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Species.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SpeciesReference.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/SpeciesReference.cpp.o -MF CMakeFiles/sbml.dir/sbml/SpeciesReference.cpp.o.d -o CMakeFiles/sbml.dir/sbml/SpeciesReference.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SpeciesReference.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SpeciesReference.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SpeciesType.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/SpeciesType.cpp.o -MF CMakeFiles/sbml.dir/sbml/SpeciesType.cpp.o.d -o CMakeFiles/sbml.dir/sbml/SpeciesType.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SpeciesType.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SpeciesType.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/StoichiometryMath.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/StoichiometryMath.cpp.o -MF CMakeFiles/sbml.dir/sbml/StoichiometryMath.cpp.o.d -o CMakeFiles/sbml.dir/sbml/StoichiometryMath.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/StoichiometryMath.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/StoichiometryMath.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SyntaxChecker.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/SyntaxChecker.cpp.o -MF CMakeFiles/sbml.dir/sbml/SyntaxChecker.cpp.o.d -o CMakeFiles/sbml.dir/sbml/SyntaxChecker.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SyntaxChecker.cpp [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Trigger.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/Trigger.cpp.o -MF CMakeFiles/sbml.dir/sbml/Trigger.cpp.o.d -o CMakeFiles/sbml.dir/sbml/Trigger.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Trigger.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Trigger.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Unit.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/Unit.cpp.o -MF CMakeFiles/sbml.dir/sbml/Unit.cpp.o.d -o CMakeFiles/sbml.dir/sbml/Unit.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Unit.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Unit.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/UnitDefinition.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/UnitDefinition.cpp.o -MF CMakeFiles/sbml.dir/sbml/UnitDefinition.cpp.o.d -o CMakeFiles/sbml.dir/sbml/UnitDefinition.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/UnitDefinition.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/UnitDefinition.cpp:55: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 23%] Building C object src/CMakeFiles/sbml.dir/sbml/UnitKind.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/UnitKind.c.o -MF CMakeFiles/sbml.dir/sbml/UnitKind.c.o.d -o CMakeFiles/sbml.dir/sbml/UnitKind.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/UnitKind.c [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/html2md/html2md.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/html2md/html2md.cpp.o -MF CMakeFiles/sbml.dir/sbml/html2md/html2md.cpp.o.d -o CMakeFiles/sbml.dir/sbml/html2md/html2md.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/html2md/html2md.cpp /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/html2md/html2md.cpp: In member function ‘html2md::Converter* html2md::Converter::appendToMd(const char*)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/html2md/html2md.cpp:197:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 197 | for (auto i = 0; i < str_len; ++i) { | ~~^~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/html2md/html2md.cpp: In member function ‘bool html2md::Converter::ParseCharInTagContent(char)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/html2md/html2md.cpp:520:27: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 520 | if (chars_in_curr_line_ > option.softBreak && !is_in_table_ && !is_in_list_ && | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/html2md/html2md.cpp:526:36: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 526 | } else if (chars_in_curr_line_ > option.hardBreak) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/html2md/html2md.cpp: In member function ‘bool html2md::Converter::ReplacePreviousSpaceInLineByNewline()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/html2md/html2md.cpp:536:20: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 536 | is_in_table_ && (prev_tag_ != kTagCode && prev_tag_ != kTagPre)) | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/html2md/table.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/html2md/table.cpp.o -MF CMakeFiles/sbml.dir/sbml/html2md/table.cpp.o.d -o CMakeFiles/sbml.dir/sbml/html2md/table.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/html2md/table.cpp [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTNode.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/math/ASTNode.cpp.o -MF CMakeFiles/sbml.dir/sbml/math/ASTNode.cpp.o.d -o CMakeFiles/sbml.dir/sbml/math/ASTNode.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp: In member function ‘ASTNode* ASTNode::combineNumbers(std::vector&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_PLUS’ not handled in switch [-Wswitch] 3730 | switch (mType) | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_TIMES’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_INTEGER’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_REAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_REAL_E’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_RATIONAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_NAME’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_NAME_AVOGADRO’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_NAME_TIME’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CONSTANT_E’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CONSTANT_FALSE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CONSTANT_PI’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CONSTANT_TRUE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LAMBDA’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ABS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ARCCOS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ARCCOSH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ARCCOT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ARCCOTH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ARCCSC’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ARCCSCH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ARCSEC’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ARCSECH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ARCSIN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ARCSINH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ARCTAN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ARCTANH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_CEILING’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_COS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_COSH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_COT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_COTH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_CSC’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_CSCH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_DELAY’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_EXP’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_FACTORIAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_FLOOR’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_LN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_LOG’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_PIECEWISE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ROOT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_SEC’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_SECH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_SIN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_SINH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_TAN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_TANH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LOGICAL_AND’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LOGICAL_NOT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LOGICAL_OR’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LOGICAL_XOR’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_RELATIONAL_EQ’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_RELATIONAL_GEQ’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_RELATIONAL_GT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_RELATIONAL_LEQ’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_RELATIONAL_LT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_RELATIONAL_NEQ’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_END_OF_CORE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_MAX’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_MIN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_QUOTIENT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_RATE_OF’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_REM’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LOGICAL_IMPLIES’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CSYMBOL_FUNCTION’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_DISTRIB_FUNCTION_NORMAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_DISTRIB_FUNCTION_UNIFORM’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_DISTRIB_FUNCTION_BERNOULLI’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_DISTRIB_FUNCTION_BINOMIAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_DISTRIB_FUNCTION_CAUCHY’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_DISTRIB_FUNCTION_CHISQUARE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_DISTRIB_FUNCTION_EXPONENTIAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_DISTRIB_FUNCTION_GAMMA’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_DISTRIB_FUNCTION_LAPLACE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_DISTRIB_FUNCTION_LOGNORMAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_DISTRIB_FUNCTION_POISSON’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_DISTRIB_FUNCTION_RAYLEIGH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LINEAR_ALGEBRA_VECTOR’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LINEAR_ALGEBRA_SELECTOR’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LINEAR_ALGEBRA_MATRIX’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LINEAR_ALGEBRA_MATRIXROW’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LINEAR_ALGEBRA_DETERMINANT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LINEAR_ALGEBRA_TRANSPOSE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LINEAR_ALGEBRA_VECTOR_PRODUCT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LINEAR_ALGEBRA_SCALAR_PRODUCT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LINEAR_ALGEBRA_OUTER_PRODUCT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LOGICAL_EXISTS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LOGICAL_FORALL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_STATISTICS_MEAN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_STATISTICS_MEDIAN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_STATISTICS_MODE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_STATISTICS_MOMENT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_STATISTICS_SDEV’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_STATISTICS_VARIANCE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_STATISTICS_MOMENTABOUT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SERIES_PRODUCT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SERIES_SUM’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SERIES_LIMIT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SERIES_TENDSTO’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_ALGEBRA_GCD’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_ALGEBRA_CONJUGATE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_ALGEBRA_ARG’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_ALGEBRA_REAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_ALGEBRA_IMAGINARY’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_ALGEBRA_LCM’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_RELATIONS_EQUIVALENT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_RELATIONS_APPROX’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_RELATIONS_FACTOROF’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CALCULUS_INT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CALCULUS_DIFF’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CALCULUS_PARTIALDIFF’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CALCULUS_LOWLIMIT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CALCULUS_UPLIMIT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CALCULUS_DIVERGENCE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CALCULUS_GRAD’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CALCULUS_CURL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CALCULUS_LAPLACIAN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SET_THEORY_SET’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SET_THEORY_LIST’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SET_THEORY_UNION’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SET_THEORY_INTERSECT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SET_THEORY_IN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SET_THEORY_NOTIN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SET_THEORY_SUBSET’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SET_THEORY_PRSUBSET’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SET_THEORY_NOTSUBSET’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SET_THEORY_NOTPRSUBSET’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SET_THEORY_SETDIFF’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SET_THEORY_CARD’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SET_THEORY_CARTESIANPRODUCT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CONSTANT_IMAGINARYI’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CONSTANTS_INTEGERS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CONSTANTS_REALS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CONSTANTS_RATIONALS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CONSTANTS_NATURALNUMBERS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CONSTANTS_COMPLEXES’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CONSTANTS_PRIMES’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CONSTANTS_EMPTYSET’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CONSTANTS_EULERGAMMA’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_BASIC_CONTENT_INTERVAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_BASIC_CONTENT_INVERSE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_BASIC_CONTENT_CONDITION’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_BASIC_CONTENT_DECLARE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_BASIC_CONTENT_COMPOSE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_BASIC_CONTENT_IDENT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_BASIC_CONTENT_DOMAIN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_BASIC_CONTENT_CODOMAIN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_BASIC_CONTENT_IMAGE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_BASIC_CONTENT_DOMAINOFAPPLICATION’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_UNKNOWN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_MINUS’ not handled in switch [-Wswitch] 3749 | switch (mType) | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_DIVIDE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_POWER’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_INTEGER’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_REAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_REAL_E’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_RATIONAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_NAME’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_NAME_AVOGADRO’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_NAME_TIME’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CONSTANT_E’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CONSTANT_FALSE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CONSTANT_PI’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CONSTANT_TRUE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LAMBDA’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ABS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ARCCOS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ARCCOSH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ARCCOT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ARCCOTH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ARCCSC’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ARCCSCH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ARCSEC’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ARCSECH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ARCSIN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ARCSINH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ARCTAN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ARCTANH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_CEILING’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_COS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_COSH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_COT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_COTH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_CSC’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_CSCH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_DELAY’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_EXP’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_FACTORIAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_FLOOR’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_LN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_LOG’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_PIECEWISE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_POWER’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ROOT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_SEC’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_SECH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_SIN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_SINH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_TAN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_TANH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LOGICAL_AND’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LOGICAL_NOT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LOGICAL_OR’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LOGICAL_XOR’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_RELATIONAL_EQ’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_RELATIONAL_GEQ’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_RELATIONAL_GT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_RELATIONAL_LEQ’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_RELATIONAL_LT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_RELATIONAL_NEQ’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_END_OF_CORE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_MAX’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_MIN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_QUOTIENT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_RATE_OF’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_REM’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LOGICAL_IMPLIES’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CSYMBOL_FUNCTION’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_DISTRIB_FUNCTION_NORMAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_DISTRIB_FUNCTION_UNIFORM’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_DISTRIB_FUNCTION_BERNOULLI’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_DISTRIB_FUNCTION_BINOMIAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_DISTRIB_FUNCTION_CAUCHY’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_DISTRIB_FUNCTION_CHISQUARE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_DISTRIB_FUNCTION_EXPONENTIAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_DISTRIB_FUNCTION_GAMMA’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_DISTRIB_FUNCTION_LAPLACE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_DISTRIB_FUNCTION_LOGNORMAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_DISTRIB_FUNCTION_POISSON’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_DISTRIB_FUNCTION_RAYLEIGH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LINEAR_ALGEBRA_VECTOR’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LINEAR_ALGEBRA_SELECTOR’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LINEAR_ALGEBRA_MATRIX’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LINEAR_ALGEBRA_MATRIXROW’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LINEAR_ALGEBRA_DETERMINANT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LINEAR_ALGEBRA_TRANSPOSE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LINEAR_ALGEBRA_VECTOR_PRODUCT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LINEAR_ALGEBRA_SCALAR_PRODUCT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LINEAR_ALGEBRA_OUTER_PRODUCT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LOGICAL_EXISTS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LOGICAL_FORALL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_STATISTICS_MEAN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_STATISTICS_MEDIAN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_STATISTICS_MODE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_STATISTICS_MOMENT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_STATISTICS_SDEV’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_STATISTICS_VARIANCE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_STATISTICS_MOMENTABOUT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SERIES_PRODUCT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SERIES_SUM’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SERIES_LIMIT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SERIES_TENDSTO’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_ALGEBRA_GCD’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_ALGEBRA_CONJUGATE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_ALGEBRA_ARG’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_ALGEBRA_REAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_ALGEBRA_IMAGINARY’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_ALGEBRA_LCM’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_RELATIONS_EQUIVALENT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_RELATIONS_APPROX’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_RELATIONS_FACTOROF’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CALCULUS_INT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CALCULUS_DIFF’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CALCULUS_PARTIALDIFF’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CALCULUS_LOWLIMIT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CALCULUS_UPLIMIT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CALCULUS_DIVERGENCE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CALCULUS_GRAD’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CALCULUS_CURL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CALCULUS_LAPLACIAN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SET_THEORY_SET’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SET_THEORY_LIST’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SET_THEORY_UNION’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SET_THEORY_INTERSECT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SET_THEORY_IN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SET_THEORY_NOTIN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SET_THEORY_SUBSET’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SET_THEORY_PRSUBSET’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SET_THEORY_NOTSUBSET’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SET_THEORY_NOTPRSUBSET’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SET_THEORY_SETDIFF’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SET_THEORY_CARD’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SET_THEORY_CARTESIANPRODUCT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CONSTANT_IMAGINARYI’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CONSTANTS_INTEGERS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CONSTANTS_REALS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CONSTANTS_RATIONALS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CONSTANTS_NATURALNUMBERS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CONSTANTS_COMPLEXES’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CONSTANTS_PRIMES’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CONSTANTS_EMPTYSET’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CONSTANTS_EULERGAMMA’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_BASIC_CONTENT_INTERVAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_BASIC_CONTENT_INVERSE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_BASIC_CONTENT_CONDITION’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_BASIC_CONTENT_DECLARE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_BASIC_CONTENT_COMPOSE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_BASIC_CONTENT_IDENT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_BASIC_CONTENT_DOMAIN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_BASIC_CONTENT_CODOMAIN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_BASIC_CONTENT_IMAGE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_BASIC_CONTENT_DOMAINOFAPPLICATION’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_UNKNOWN’ not handled in switch [-Wswitch] [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/DefinitionURLRegistry.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/math/DefinitionURLRegistry.cpp.o -MF CMakeFiles/sbml.dir/sbml/math/DefinitionURLRegistry.cpp.o.d -o CMakeFiles/sbml.dir/sbml/math/DefinitionURLRegistry.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/DefinitionURLRegistry.cpp /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/DefinitionURLRegistry.cpp: In static member function ‘static int DefinitionURLRegistry::addDefinitionURL(const std::string&, int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/DefinitionURLRegistry.cpp:82:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 82 | if (getNumDefinitionURLs() == n + 1) | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/DefinitionURLRegistry.cpp: In static member function ‘static std::string DefinitionURLRegistry::getDefinitionUrlByIndex(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/DefinitionURLRegistry.cpp:106:11: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 106 | if (i == index) | ~~^~~~~~~~ [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/FormulaFormatter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/math/FormulaFormatter.cpp.o -MF CMakeFiles/sbml.dir/sbml/math/FormulaFormatter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/math/FormulaFormatter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/FormulaParser.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/math/FormulaParser.cpp.o -MF CMakeFiles/sbml.dir/sbml/math/FormulaParser.cpp.o.d -o CMakeFiles/sbml.dir/sbml/math/FormulaParser.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/FormulaTokenizer.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/math/FormulaTokenizer.cpp.o -MF CMakeFiles/sbml.dir/sbml/math/FormulaTokenizer.cpp.o.d -o CMakeFiles/sbml.dir/sbml/math/FormulaTokenizer.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaTokenizer.cpp [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/L3FormulaFormatter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/math/L3FormulaFormatter.cpp.o -MF CMakeFiles/sbml.dir/sbml/math/L3FormulaFormatter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/math/L3FormulaFormatter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/L3FormulaFormatter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/L3FormulaFormatter.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/L3Parser.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/math/L3Parser.cpp.o -MF CMakeFiles/sbml.dir/sbml/math/L3Parser.cpp.o.d -o CMakeFiles/sbml.dir/sbml/math/L3Parser.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/L3Parser.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from L3Parser.ypp:86: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/L3ParserSettings.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/math/L3ParserSettings.cpp.o -MF CMakeFiles/sbml.dir/sbml/math/L3ParserSettings.cpp.o.d -o CMakeFiles/sbml.dir/sbml/math/L3ParserSettings.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/L3ParserSettings.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/L3ParserSettings.h:442, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/L3ParserSettings.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/MathML.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/math/MathML.cpp.o -MF CMakeFiles/sbml.dir/sbml/math/MathML.cpp.o.d -o CMakeFiles/sbml.dir/sbml/math/MathML.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/MathML.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/MathML.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/MathML.cpp: In function ‘bool isValidCSymbol(SBMLNamespaces*, ASTNodeType_t)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/MathML.cpp:404:18: warning: unused variable ‘version’ [-Wunused-variable] 404 | unsigned int version = sbmlns->getVersion(); | ^~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/MathML.cpp: In function ‘void setTypeCI(ASTNode&, const XMLToken&, XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/MathML.cpp:424:16: warning: unused variable ‘n’ [-Wunused-variable] 424 | unsigned int n = DefinitionURLRegistry::getInstance().getNumDefinitionURLs(); | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/MathML.cpp: In function ‘ASTNode* readMathML(XMLInputStream&, std::string, bool)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/MathML.cpp:2177:21: warning: unused variable ‘name’ [-Wunused-variable] 2177 | const string& name = element1.getName(); | ^~~~ [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/units/FormulaUnitsData.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/units/FormulaUnitsData.cpp.o -MF CMakeFiles/sbml.dir/sbml/units/FormulaUnitsData.cpp.o.d -o CMakeFiles/sbml.dir/sbml/units/FormulaUnitsData.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/units/UnitFormulaFormatter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/units/UnitFormulaFormatter.cpp.o -MF CMakeFiles/sbml.dir/sbml/units/UnitFormulaFormatter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/units/UnitFormulaFormatter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/units/UnitKindList.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/units/UnitKindList.cpp.o -MF CMakeFiles/sbml.dir/sbml/units/UnitKindList.cpp.o.d -o CMakeFiles/sbml.dir/sbml/units/UnitKindList.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitKindList.cpp [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/CallbackRegistry.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/util/CallbackRegistry.cpp.o -MF CMakeFiles/sbml.dir/sbml/util/CallbackRegistry.cpp.o.d -o CMakeFiles/sbml.dir/sbml/util/CallbackRegistry.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/CallbackRegistry.cpp [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/ElementFilter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/util/ElementFilter.cpp.o -MF CMakeFiles/sbml.dir/sbml/util/ElementFilter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/util/ElementFilter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/ElementFilter.cpp [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/IdFilter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/util/IdFilter.cpp.o -MF CMakeFiles/sbml.dir/sbml/util/IdFilter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/util/IdFilter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/IdFilter.cpp [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/IdList.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/util/IdList.cpp.o -MF CMakeFiles/sbml.dir/sbml/util/IdList.cpp.o.d -o CMakeFiles/sbml.dir/sbml/util/IdList.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/IdList.cpp [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/IdentifierTransformer.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/util/IdentifierTransformer.cpp.o -MF CMakeFiles/sbml.dir/sbml/util/IdentifierTransformer.cpp.o.d -o CMakeFiles/sbml.dir/sbml/util/IdentifierTransformer.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/IdentifierTransformer.cpp [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/List.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/util/List.cpp.o -MF CMakeFiles/sbml.dir/sbml/util/List.cpp.o.d -o CMakeFiles/sbml.dir/sbml/util/List.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/List.cpp [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/MathFilter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src 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-isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/util/MathFilter.cpp.o -MF CMakeFiles/sbml.dir/sbml/util/MathFilter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/util/MathFilter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/MathFilter.cpp [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/MetaIdFilter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/util/MetaIdFilter.cpp.o -MF CMakeFiles/sbml.dir/sbml/util/MetaIdFilter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/util/MetaIdFilter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/MetaIdFilter.cpp [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/PrefixTransformer.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/util/PrefixTransformer.cpp.o -MF CMakeFiles/sbml.dir/sbml/util/PrefixTransformer.cpp.o.d -o CMakeFiles/sbml.dir/sbml/util/PrefixTransformer.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/PrefixTransformer.cpp [ 25%] Building C object src/CMakeFiles/sbml.dir/sbml/util/Stack.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator 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-ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/util/Stack.c.o -MF CMakeFiles/sbml.dir/sbml/util/Stack.c.o.d -o CMakeFiles/sbml.dir/sbml/util/Stack.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/Stack.c [ 25%] Building C object src/CMakeFiles/sbml.dir/sbml/util/StringBuffer.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/util/StringBuffer.c.o -MF CMakeFiles/sbml.dir/sbml/util/StringBuffer.c.o.d -o CMakeFiles/sbml.dir/sbml/util/StringBuffer.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/StringBuffer.c [ 25%] Building C object src/CMakeFiles/sbml.dir/sbml/util/memory.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/util/memory.c.o -MF CMakeFiles/sbml.dir/sbml/util/memory.c.o.d -o CMakeFiles/sbml.dir/sbml/util/memory.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/memory.c [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/util.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/util/util.cpp.o -MF CMakeFiles/sbml.dir/sbml/util/util.cpp.o.d -o CMakeFiles/sbml.dir/sbml/util/util.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/util.cpp [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/ConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/ConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/ConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/ConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/ConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/ConsistencyValidator.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/IdentifierConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/IdentifierConsistencyValidator.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/InternalConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/InternalConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/InternalConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/InternalConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/InternalConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/InternalConsistencyValidator.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/L1CompatibilityValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/L1CompatibilityValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/L1CompatibilityValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/L1CompatibilityValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L1CompatibilityValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/L1CompatibilityConstraints.cpp:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L1CompatibilityValidator.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/L2v1CompatibilityValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/L2v1CompatibilityValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/L2v1CompatibilityValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/L2v1CompatibilityValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L2v1CompatibilityValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/L2v1CompatibilityConstraints.cpp:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L2v1CompatibilityValidator.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/L2v2CompatibilityValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/L2v2CompatibilityValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/L2v2CompatibilityValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/L2v2CompatibilityValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L2v2CompatibilityValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/L2v2CompatibilityConstraints.cpp:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L2v2CompatibilityValidator.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/L2v3CompatibilityValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/L2v3CompatibilityValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/L2v3CompatibilityValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/L2v3CompatibilityValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L2v3CompatibilityValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/L2v3CompatibilityConstraints.cpp:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L2v3CompatibilityValidator.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/L2v4CompatibilityValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/L2v4CompatibilityValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/L2v4CompatibilityValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/L2v4CompatibilityValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L2v4CompatibilityValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/L2v4CompatibilityConstraints.cpp:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L2v4CompatibilityValidator.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/L3v1CompatibilityValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/L3v1CompatibilityValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/L3v1CompatibilityValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/L3v1CompatibilityValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L3v1CompatibilityValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/L3v1CompatibilityConstraints.cpp:47, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L3v1CompatibilityValidator.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/L3v2CompatibilityValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/L3v2CompatibilityValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/L3v2CompatibilityValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/L3v2CompatibilityValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L3v2CompatibilityValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/L3v2CompatibilityConstraints.cpp:47, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L3v2CompatibilityValidator.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/MathMLConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/MathMLConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/MathMLConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/MathMLConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/MathMLConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/MathMLConsistencyValidator.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/ModelingPracticeValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/ModelingPracticeValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/ModelingPracticeValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/ModelingPracticeValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/ModelingPracticeValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/ModelingPracticeValidator.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/OverdeterminedValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/OverdeterminedValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/OverdeterminedValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/OverdeterminedValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/OverdeterminedValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/OverdeterminedValidator.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/SBMLExternalValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/SBMLExternalValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/SBMLExternalValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/SBMLExternalValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBMLExternalValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBMLValidator.h:84, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBMLExternalValidator.h:52, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBMLExternalValidator.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/SBMLInternalValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator 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-isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/SBMLInternalValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/SBMLInternalValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/SBMLInternalValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBMLInternalValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBMLValidator.h:84, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBMLInternalValidator.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBMLInternalValidator.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/SBMLValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/SBMLValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/SBMLValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/SBMLValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBMLValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBMLValidator.h:84, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBMLValidator.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/SBOConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/SBOConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/SBOConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/SBOConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBOConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBOConsistencyValidator.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/StrictUnitConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/StrictUnitConsistencyValidator.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/UnitConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/UnitConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/UnitConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/UnitConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/UnitConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/UnitConsistencyValidator.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/VConstraint.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/VConstraint.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/VConstraint.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/VConstraint.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/Validator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/Validator.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/Validator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/Validator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/Validator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/Validator.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/ArgumentsUnitsCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/ArgumentsUnitsCheck.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/ArgumentsUnitsCheck.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/ArgumentsUnitsCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/ArgumentsUnitsCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/ArgumentsUnitsCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/AssignmentCycles.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/AssignmentCycles.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/AssignmentCycles.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/AssignmentCycles.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/AssignmentCycles.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/AssignmentCycles.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/AssignmentRuleOrdering.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/AssignmentRuleOrdering.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/CiElementMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/CiElementMathCheck.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/CiElementMathCheck.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/CiElementMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/CiElementMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/CiElementMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/CiElementNot0DComp.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/CiElementNot0DComp.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/CiElementNot0DComp.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/CiElementNot0DComp.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/CiElementNot0DComp.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/CiElementNot0DComp.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/CompartmentOutsideCycles.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/CompartmentOutsideCycles.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/CompartmentOutsideCycles.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/CompartmentOutsideCycles.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/CompartmentOutsideCycles.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/CompartmentOutsideCycles.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/EqualityArgsMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/EqualityArgsMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/ExponentUnitsCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/ExponentUnitsCheck.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/ExponentUnitsCheck.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/ExponentUnitsCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/ExponentUnitsCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/ExponentUnitsCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionApplyMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionApplyMathCheck.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionApplyMathCheck.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionApplyMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/FunctionApplyMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/FunctionApplyMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionDefinitionRecursion.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionDefinitionRecursion.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionDefinitionRecursion.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionDefinitionRecursion.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/FunctionDefinitionRecursion.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/FunctionDefinitionRecursion.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionDefinitionVars.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionDefinitionVars.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionDefinitionVars.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionDefinitionVars.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/FunctionDefinitionVars.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/FunctionDefinitionVars.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionReferredToExists.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionReferredToExists.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionReferredToExists.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionReferredToExists.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/FunctionReferredToExists.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/FunctionReferredToExists.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/IdBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/IdBase.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/IdBase.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/IdBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/IdBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/IdBase.h:52, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/IdBase.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/IdNameNewOnSBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/IdNameNewOnSBase.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/KineticLawUnitsCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/KineticLawUnitsCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/KineticLawVars.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/KineticLawVars.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/KineticLawVars.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/KineticLawVars.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/KineticLawVars.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/KineticLawVars.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/LambdaMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/LambdaMathCheck.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/LambdaMathCheck.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/LambdaMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/LambdaMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/LambdaMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/LocalParameterMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/LocalParameterMathCheck.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/LocalParameterMathCheck.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/LocalParameterMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/LocalParameterMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/LocalParameterMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/LogicalArgsMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/LogicalArgsMathCheck.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/LogicalArgsMathCheck.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/LogicalArgsMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/LogicalArgsMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/LogicalArgsMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/MathMLBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/MathMLBase.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/MathMLBase.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/MathMLBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/MathMLBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/MathMLBase.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/ModelUnitsDangling.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/ModelUnitsDangling.h:55, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/ModelUnitsDangling.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/NumberArgsMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/NumberArgsMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/NumericArgsMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/NumericArgsMathCheck.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/NumericArgsMathCheck.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/NumericArgsMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/NumericArgsMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/NumericArgsMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/NumericReturnMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/NumericReturnMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/OverDeterminedCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/OverDeterminedCheck.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/OverDeterminedCheck.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/OverDeterminedCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/OverDeterminedCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/OverDeterminedCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/PieceBooleanMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/PieceBooleanMathCheck.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/PieceBooleanMathCheck.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/PieceBooleanMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/PieceBooleanMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/PieceBooleanMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/PiecewiseValueMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/PiecewiseValueMathCheck.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/PiecewiseValueMathCheck.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/PiecewiseValueMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/PiecewiseValueMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/PiecewiseValueMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/PowerUnitsCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/PowerUnitsCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCycles.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCycles.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCycles.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCycles.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/RateOfCycles.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/RateOfCycles.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/ReportEmptyListOf.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/ReportEmptyListOf.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/ReportEmptyListOf.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/ReportEmptyListOf.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/ReportEmptyListOf.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/ReportEmptyListOf.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/SpeciesReactionOrRule.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/SpeciesReactionOrRule.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/StoichiometryMathVars.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/StoichiometryMathVars.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdBase.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdBase.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueIdBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/IdBase.h:52, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueIdBase.h:55, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueIdBase.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsInModel.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsInModel.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsInModel.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsInModel.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueIdsInModel.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueIdsInModel.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueMetaId.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueMetaId.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueMetaId.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueMetaId.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueMetaId.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueMetaId.h:55, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueMetaId.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueVarsInRules.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueVarsInRules.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UnitsBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/UnitsBase.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/UnitsBase.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/UnitsBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UnitsBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UnitsBase.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/ValidCnUnitsValue.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/ValidCnUnitsValue.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/CompressCommon.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/compress/CompressCommon.cpp.o -MF CMakeFiles/sbml.dir/sbml/compress/CompressCommon.cpp.o.d -o CMakeFiles/sbml.dir/sbml/compress/CompressCommon.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/CompressCommon.cpp [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/InputDecompressor.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/compress/InputDecompressor.cpp.o -MF CMakeFiles/sbml.dir/sbml/compress/InputDecompressor.cpp.o.d -o CMakeFiles/sbml.dir/sbml/compress/InputDecompressor.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/InputDecompressor.cpp [ 32%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/OutputCompressor.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/compress/OutputCompressor.cpp.o -MF CMakeFiles/sbml.dir/sbml/compress/OutputCompressor.cpp.o.d -o CMakeFiles/sbml.dir/sbml/compress/OutputCompressor.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/OutputCompressor.cpp [ 32%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/bzfstream.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/compress/bzfstream.cpp.o -MF CMakeFiles/sbml.dir/sbml/compress/bzfstream.cpp.o.d -o CMakeFiles/sbml.dir/sbml/compress/bzfstream.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/bzfstream.cpp [ 32%] Building C object src/CMakeFiles/sbml.dir/sbml/compress/zip.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml 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-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/compress/zip.c.o -MF CMakeFiles/sbml.dir/sbml/compress/zip.c.o.d -o CMakeFiles/sbml.dir/sbml/compress/zip.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/zip.c [ 32%] Building C object src/CMakeFiles/sbml.dir/sbml/compress/unzip.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/compress/unzip.c.o -MF CMakeFiles/sbml.dir/sbml/compress/unzip.c.o.d -o CMakeFiles/sbml.dir/sbml/compress/unzip.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/unzip.c [ 32%] Building C object src/CMakeFiles/sbml.dir/sbml/compress/ioapi.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/compress/ioapi.c.o -MF CMakeFiles/sbml.dir/sbml/compress/ioapi.c.o.d -o CMakeFiles/sbml.dir/sbml/compress/ioapi.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi.c [ 32%] Building C object src/CMakeFiles/sbml.dir/sbml/compress/ioapi_mem.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/compress/ioapi_mem.c.o -MF CMakeFiles/sbml.dir/sbml/compress/ioapi_mem.c.o.d -o CMakeFiles/sbml.dir/sbml/compress/ioapi_mem.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c: In function ‘fopen_mem_func’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c:35:18: warning: old-style function definition [-Wold-style-definition] 35 | voidpf ZCALLBACK fopen_mem_func (opaque, filename, mode) | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c: In function ‘fopendisk_mem_func’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c:62:18: warning: old-style function definition [-Wold-style-definition] 62 | voidpf ZCALLBACK fopendisk_mem_func (opaque, stream, number_disk, mode) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c: In function ‘fread_mem_func’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c:72:17: warning: old-style function definition [-Wold-style-definition] 72 | uLong ZCALLBACK fread_mem_func (opaque, stream, buf, size) | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c: In function ‘fwrite_mem_func’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c:90:17: warning: old-style function definition [-Wold-style-definition] 90 | uLong ZCALLBACK fwrite_mem_func (opaque, stream, buf, size) | ^~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c: In function ‘ftell_mem_func’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c:126:16: warning: old-style function definition [-Wold-style-definition] 126 | long ZCALLBACK ftell_mem_func (opaque, stream) | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c: In function ‘fseek_mem_func’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c:134:16: warning: old-style function definition [-Wold-style-definition] 134 | long ZCALLBACK fseek_mem_func (opaque, stream, offset, origin) | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c: In function ‘fclose_mem_func’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c:163:15: warning: old-style function definition [-Wold-style-definition] 163 | int ZCALLBACK fclose_mem_func (opaque, stream) | ^~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c: In function ‘ferror_mem_func’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c:171:15: warning: old-style function definition [-Wold-style-definition] 171 | int ZCALLBACK ferror_mem_func (opaque, stream) | ^~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c: In function ‘fill_memory_filefunc’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c:179:6: warning: old-style function definition [-Wold-style-definition] 179 | void fill_memory_filefunc (pzlib_filefunc_def, ourmem) | ^~~~~~~~~~~~~~~~~~~~ [ 32%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/zfstream.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/compress/zfstream.cpp.o -MF CMakeFiles/sbml.dir/sbml/compress/zfstream.cpp.o.d -o CMakeFiles/sbml.dir/sbml/compress/zfstream.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/zfstream.cpp [ 32%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/zipfstream.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/compress/zipfstream.cpp.o -MF CMakeFiles/sbml.dir/sbml/compress/zipfstream.cpp.o.d -o CMakeFiles/sbml.dir/sbml/compress/zipfstream.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/zipfstream.cpp [ 32%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLAttributes.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints 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src/CMakeFiles/sbml.dir/sbml/xml/XMLConstructorException.cpp.o -MF CMakeFiles/sbml.dir/sbml/xml/XMLConstructorException.cpp.o.d -o CMakeFiles/sbml.dir/sbml/xml/XMLConstructorException.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLConstructorException.cpp [ 32%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLError.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common 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CMakeFiles/sbml.dir/sbml/xml/XMLFileBuffer.cpp.o.d -o CMakeFiles/sbml.dir/sbml/xml/XMLFileBuffer.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLFileBuffer.cpp [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLHandler.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension 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CMakeFiles/sbml.dir/sbml/xml/XMLHandler.cpp.o.d -o CMakeFiles/sbml.dir/sbml/xml/XMLHandler.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLHandler.cpp [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLInputStream.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension 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CMakeFiles/sbml.dir/sbml/xml/XMLMemoryBuffer.cpp.o.d -o CMakeFiles/sbml.dir/sbml/xml/XMLMemoryBuffer.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLMemoryBuffer.cpp [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLNamespaces.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension 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CMakeFiles/sbml.dir/sbml/xml/XMLNamespaces.cpp.o.d -o CMakeFiles/sbml.dir/sbml/xml/XMLNamespaces.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLNamespaces.cpp [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLNode.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension 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CMakeFiles/sbml.dir/sbml/xml/XMLNode.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLNode.cpp [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLOutputStream.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml 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/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLOutputStream.cpp /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLOutputStream.cpp: In member function ‘void XMLOutputStream::writeComment(const std::string&, const std::string&, bool)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLOutputStream.cpp:997:44: warning: ‘%02d’ directive output may be truncated writing between 2 and 11 bytes into a region of size between 5 and 15 [-Wformat-truncation=] 997 | snprintf(formattedDateAndTime, 17, "%d-%02d-%02d %02d:%02d", | ^~~~ In member function ‘void XMLOutputStream::writeComment(const std::string&, const std::string&, bool)’, inlined from ‘void XMLOutputStream::writeComment(const std::string&, const std::string&, bool)’ at /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLOutputStream.cpp:973:1: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLOutputStream.cpp:997:40: note: directive argument in the range [-2147483647, 2147483647] 997 | snprintf(formattedDateAndTime, 17, "%d-%02d-%02d %02d:%02d", | ^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:970, from /usr/include/c++/15/cstdio:47, from /usr/include/c++/15/ext/string_conversions.h:47, from /usr/include/c++/15/bits/basic_string.h:4444, from /usr/include/c++/15/string:56, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLOutputStream.cpp:44: In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘void XMLOutputStream::writeComment(const std::string&, const std::string&, bool)’ at /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLOutputStream.cpp:997:13, inlined from ‘void XMLOutputStream::writeComment(const std::string&, const std::string&, bool)’ at /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLOutputStream.cpp:973:1: /usr/include/riscv64-linux-gnu/bits/stdio2.h:68:35: note: ‘__builtin___snprintf_chk’ output between 14 and 60 bytes into a destination of size 17 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLParser.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/xml/XMLParser.cpp.o -MF CMakeFiles/sbml.dir/sbml/xml/XMLParser.cpp.o.d -o CMakeFiles/sbml.dir/sbml/xml/XMLParser.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLParser.cpp [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLToken.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml 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-D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/CMakeFiles/sbml.dir/sbml/xml/XMLToken.cpp.o -MF CMakeFiles/sbml.dir/sbml/xml/XMLToken.cpp.o.d -o CMakeFiles/sbml.dir/sbml/xml/XMLToken.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLToken.cpp [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLTokenizer.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common 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src/CMakeFiles/sbml.dir/sbml/xml/XMLTriple.cpp.o -MF CMakeFiles/sbml.dir/sbml/xml/XMLTriple.cpp.o.d -o CMakeFiles/sbml.dir/sbml/xml/XMLTriple.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLTriple.cpp [ 34%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/LibXMLAttributes.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common 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src/CMakeFiles/sbml.dir/sbml/xml/LibXMLAttributes.cpp.o -MF CMakeFiles/sbml.dir/sbml/xml/LibXMLAttributes.cpp.o.d -o CMakeFiles/sbml.dir/sbml/xml/LibXMLAttributes.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/LibXMLAttributes.cpp [ 34%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/LibXMLHandler.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common 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src/CMakeFiles/sbml.dir/sbml/xml/LibXMLHandler.cpp.o -MF CMakeFiles/sbml.dir/sbml/xml/LibXMLHandler.cpp.o.d -o CMakeFiles/sbml.dir/sbml/xml/LibXMLHandler.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/LibXMLHandler.cpp [ 34%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/LibXMLNamespaces.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common 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cmake_symlink_library libsbml.so.5.20.5 libsbml.so.5 libsbml.so make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 34%] Built target sbml make -f src/CMakeFiles/sbml-static.dir/build.make src/CMakeFiles/sbml-static.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/CMakeFiles/sbml-static.dir/DependInfo.cmake "--color=" sbml-static make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/CMakeFiles/sbml-static.dir/build.make src/CMakeFiles/sbml-static.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 34%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompExtension.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompExtension.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegister.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.cpp:36: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 34%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:67: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:77: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.cpp: In member function ‘Submodel* CompModelPlugin::createSubmodel()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.cpp:314:3: note: in expansion of macro ‘COMP_CREATE_NS’ 314 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.cpp: In member function ‘Port* CompModelPlugin::createPort()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.cpp:451:3: note: in expansion of macro ‘COMP_CREATE_NS’ 451 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 34%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:72: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ModelDefinition.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:84: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:75: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp: In member function ‘ModelDefinition* CompSBMLDocumentPlugin::createModelDefinition()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:401:3: note: in expansion of macro ‘COMP_CREATE_NS’ 401 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp: In member function ‘ExternalModelDefinition* CompSBMLDocumentPlugin::createExternalModelDefinition()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:538:3: note: in expansion of macro ‘COMP_CREATE_NS’ 538 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 34%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:72: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function ‘virtual SBase* CompSBasePlugin::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:175:7: note: in expansion of macro ‘COMP_CREATE_NS’ 175 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function ‘ReplacedElement* CompSBasePlugin::createReplacedElement()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:374:3: note: in expansion of macro ‘COMP_CREATE_NS’ 374 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function ‘ReplacedBy* CompSBasePlugin::createReplacedBy()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:444:3: note: in expansion of macro ‘COMP_CREATE_NS’ 444 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function ‘virtual void CompSBasePlugin::createListOfReplacedElements()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:551:5: note: in expansion of macro ‘COMP_CREATE_NS’ 551 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/CompBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/CompBase.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/CompBase.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/CompBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:52, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.cpp:38: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Deletion.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Deletion.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Deletion.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Deletion.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Deletion.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Deletion.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Deletion.h:104, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Deletion.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Deletion.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ModelDefinition.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:84, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfDeletions.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfDeletions.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Deletion.h:104, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfDeletions.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfDeletions.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfDeletions.cpp: In member function ‘virtual SBase* ListOfDeletions::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfDeletions.cpp:167:5: note: in expansion of macro ‘COMP_CREATE_NS’ 167 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:122, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp: In member function ‘virtual SBase* ListOfExternalModelDefinitions::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp:160:5: note: in expansion of macro ‘COMP_CREATE_NS’ 160 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ModelDefinition.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfModelDefinitions.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp: In member function ‘virtual SBase* ListOfModelDefinitions::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp:160:5: note: in expansion of macro ‘COMP_CREATE_NS’ 160 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfPorts.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfPorts.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Port.h:85, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfPorts.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfPorts.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfPorts.cpp: In member function ‘virtual SBase* ListOfPorts::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfPorts.cpp:159:5: note: in expansion of macro ‘COMP_CREATE_NS’ 159 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp: In member function ‘virtual SBase* ListOfReplacedElements::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp:123:5: note: in expansion of macro ‘COMP_CREATE_NS’ 123 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:118, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp: In member function ‘virtual SBase* ListOfSubmodels::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp:159:5: note: in expansion of macro ‘COMP_CREATE_NS’ 159 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ModelDefinition.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ModelDefinition.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ModelDefinition.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ModelDefinition.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ModelDefinition.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Port.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Port.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Port.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Port.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Port.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Port.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Port.h:85, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Port.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ReplacedBy.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ReplacedBy.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ReplacedBy.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ReplacedBy.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedBy.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedBy.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedBy.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedBy.h:62: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedBy.h:65: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedBy.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Replacing.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Replacing.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Replacing.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Replacing.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:77, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.cpp: In member function ‘SBaseRef* SBaseRef::createSBaseRef()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.cpp:553:5: note: in expansion of macro ‘COMP_CREATE_NS’ 553 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.cpp: In member function ‘virtual SBase* SBaseRef::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.cpp:672:7: note: in expansion of macro ‘COMP_CREATE_NS’ 672 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.cpp:683:7: note: in expansion of macro ‘COMP_CREATE_NS’ 683 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Submodel.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Submodel.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Submodel.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Submodel.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/L3Parser.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Rule.h:147, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/RateRule.h:154, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.cpp:40: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ModelDefinition.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:84, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.cpp: In member function ‘Deletion* Submodel::createDeletion()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.cpp:498:3: note: in expansion of macro ‘COMP_CREATE_NS’ 498 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/CompFlatteningConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/CompFlatteningConverter.h:492, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/CompFlatteningConverter.cpp:38: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:67: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:77: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/CompFlatteningConverter.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/SBMLFileResolver.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/SBMLFileResolver.cpp:38: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLResolver.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLResolver.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLResolver.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLResolver.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/SBMLResolver.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/SBMLResolver.cpp:38: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/SBMLResolverRegistry.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/SBMLResolverRegistry.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLUri.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLUri.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLUri.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLUri.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/SBMLUri.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/SBMLUri.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/CompConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompConsistencyConstraints.cpp:39, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/CompConsistencyValidator.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:58: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompConsistencyConstraints.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdentifierConsistencyConstraints.cpp:39, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:58: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueModelIds.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdentifierConsistencyConstraints.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompUnitConsistencyConstraints.cpp:39, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:58: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UnitReplacementCheck.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompUnitConsistencyConstraints.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 37%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/CompValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/CompValidator.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:58: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/CompValidator.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 37%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ClassReplacements.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ClassReplacements.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ClassReplacements.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ClassReplacements.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/ClassReplacements.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/ClassReplacements.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/FunctionDefinition.h:140, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:454: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/ClassReplacements.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/ClassReplacements.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 37%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:58: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 37%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/FunctionDefinition.h:140, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:454: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:77, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp:40: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp: In member function ‘void ExtModelReferenceCycles::logCycle(const Model&, std::string, std::string)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp:290:3: note: in expansion of macro ‘COMP_CREATE_NS’ 290 | COMP_CREATE_NS(compns, m.getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 37%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/FunctionDefinition.h:140, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:454: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 37%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/FunctionDefinition.h:140, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:454: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:77, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp:40: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp: In member function ‘void SubmodelReferenceCycles::logCycle(const Model&, std::string, std::string)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp:329:3: note: in expansion of macro ‘COMP_CREATE_NS’ 329 | COMP_CREATE_NS(compns, m.getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 37%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 37%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/FunctionDefinition.h:140, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:454: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueComponentIds.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp:38: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 37%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/FunctionDefinition.h:140, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:454: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueModelIds.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp:38: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 37%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniquePortIds.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniquePortIds.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniquePortIds.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniquePortIds.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniquePortIds.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniquePortIds.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/FunctionDefinition.h:140, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:454: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniquePortIds.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniquePortIds.cpp:38: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 37%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/FunctionDefinition.h:140, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:454: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniquePortReferences.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp:38: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 37%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/FunctionDefinition.h:140, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:454: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/FunctionDefinition.h:140, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:454: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/CompIdBase.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UnitReplacementCheck.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcExtension.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcExtension.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegister.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.cpp:38: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.h:146, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.h:150: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function ‘FluxBound* FbcModelPlugin::createFluxBound()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:683:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 683 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function ‘Objective* FbcModelPlugin::createObjective()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:944:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 944 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function ‘GeneProduct* FbcModelPlugin::createGeneProduct()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1120:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1120 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function ‘GeneAssociation* FbcModelPlugin::createGeneAssociation()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1323:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1323 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function ‘UserDefinedConstraint* FbcModelPlugin::createUserDefinedConstraint()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1558:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1558 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function ‘virtual SBase* FbcModelPlugin::createChildObject(const std::string&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:2029:10: warning: unused variable ‘obj’ [-Wunused-variable] 2029 | SBase* obj = NULL; | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function ‘virtual unsigned int FbcModelPlugin::getNumObjects(const std::string&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:2132:16: warning: unused variable ‘n’ [-Wunused-variable] 2132 | unsigned int n = 0; | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function ‘virtual SBase* FbcModelPlugin::getObject(const std::string&, unsigned int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:2166:10: warning: unused variable ‘obj’ [-Wunused-variable] 2166 | SBase* obj = NULL; | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function ‘virtual SBase* FbcModelPlugin::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:2388:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 2388 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:70, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcReactionPlugin.h:70, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:73: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp: In member function ‘virtual SBase* FbcReactionPlugin::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:153:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 153 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp: In member function ‘GeneProductAssociation* FbcReactionPlugin::createGeneProductAssociation()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:447:3: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 447 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp: In member function ‘virtual SBase* FbcReactionPlugin::createChildObject(const std::string&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:896:10: warning: unused variable ‘obj’ [-Wunused-variable] 896 | SBase* obj = NULL; | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp: In member function ‘virtual unsigned int FbcReactionPlugin::getNumObjects(const std::string&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:918:16: warning: unused variable ‘n’ [-Wunused-variable] 918 | unsigned int n = 0; | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp: In member function ‘virtual SBase* FbcReactionPlugin::getObject(const std::string&, unsigned int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:944:10: warning: unused variable ‘obj’ [-Wunused-variable] 944 | SBase* obj = NULL; | ^~~ [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLDocumentPlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp:35: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSBasePlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSBasePlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSBasePlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSBasePlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcSBasePlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:70, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcSBasePlugin.h:52, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcSBasePlugin.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:73: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcSBasePlugin.cpp: In member function ‘KeyValuePair* FbcSBasePlugin::createKeyValuePair()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcSBasePlugin.cpp:229:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 229 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcSpeciesPlugin.h:90, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Association.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Association.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Association.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Association.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/Association.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/Association.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/Association.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function ‘FbcAnd* FbcAnd::createAnd()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.cpp:301:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 301 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function ‘FbcOr* FbcAnd::createOr()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.cpp:338:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 338 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function ‘GeneProductRef* FbcAnd::createGeneProductRef()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.cpp:375:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 375 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.h:110, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function ‘FbcAnd* ListOfFbcAssociations::createAnd()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:953:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 953 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function ‘FbcOr* ListOfFbcAssociations::createOr()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:990:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 990 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function ‘GeneProductRef* ListOfFbcAssociations::createGeneProductRef()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1027:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1027 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function ‘virtual SBase* ListOfFbcAssociations::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1123:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1123 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1131:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1131 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1139:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1139 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1147:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1147 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcOr.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcOr.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcOr.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function ‘FbcAnd* FbcOr::createAnd()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcOr.cpp:313:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 313 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function ‘FbcOr* FbcOr::createOr()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcOr.cpp:350:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 350 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function ‘GeneProductRef* FbcOr::createGeneProductRef()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FbcOr.cpp:387:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 387 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FluxBound.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FluxBound.h:131, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FluxBound.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FluxBound.cpp: In member function ‘virtual SBase* ListOfFluxBounds::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FluxBound.cpp:1189:7: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1189 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FluxObjective.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FluxObjective.h:98, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FluxObjective.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FluxObjective.cpp: In member function ‘FluxObjective* ListOfFluxObjectives::createFluxObjective()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FluxObjective.cpp:1385:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1385 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FluxObjective.cpp: In member function ‘virtual SBase* ListOfFluxObjectives::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/FluxObjective.cpp:1481:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1481 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneAssociation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneAssociation.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneAssociation.cpp: In member function ‘Association* GeneAssociation::createAssociation()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:355:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 355 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneAssociation.cpp: In member function ‘virtual SBase* ListOfGeneAssociations::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:700:7: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 700 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:94, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.cpp: In member function ‘GeneProduct* ListOfGeneProducts::createGeneProduct()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.cpp:1112:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1112 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.cpp: In member function ‘virtual SBase* ListOfGeneProducts::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.cpp:1208:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1208 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:101, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function ‘virtual FbcAnd* GeneProductAssociation::createAnd()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:218:3: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 218 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function ‘virtual FbcOr* GeneProductAssociation::createOr()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:233:3: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 233 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function ‘virtual GeneProductRef* GeneProductAssociation::createGeneProductRef()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:248:3: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 248 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function ‘virtual SBase* GeneProductAssociation::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:994:3: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 994 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProductRef.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.h:146, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/GeneProductRef.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/KeyValuePair.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/KeyValuePair.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/KeyValuePair.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/KeyValuePair.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/KeyValuePair.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/KeyValuePair.h:58, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/KeyValuePair.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/KeyValuePair.cpp: In member function ‘virtual void KeyValuePair::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/KeyValuePair.cpp:879:8: warning: unused variable ‘assigned’ [-Wunused-variable] 879 | bool assigned = false; | ^~~~~~~~ [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfKeyValuePairs.h:58, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp: In member function ‘KeyValuePair* ListOfKeyValuePairs::createKeyValuePair()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp:320:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 320 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp: In member function ‘virtual SBase* ListOfKeyValuePairs::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp:404:3: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 404 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp: In member function ‘virtual void ListOfKeyValuePairs::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp:449:8: warning: unused variable ‘assigned’ [-Wunused-variable] 449 | bool assigned = false; | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp: In member function ‘void ListOfKeyValuePairs::readL3V1V3Attributes(const XMLAttributes&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp:499:16: warning: unused variable ‘pkgVersion’ [-Wunused-variable] 499 | unsigned int pkgVersion = getPackageVersion(); | ^~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfKeyValuePairs.cpp:500:17: warning: unused variable ‘log’ [-Wunused-variable] 500 | SBMLErrorLog* log = getErrorLog(); | ^~~ [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/ListOfUserDefinedConstraintComponents.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/ListOfUserDefinedConstraintComponents.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/ListOfUserDefinedConstraintComponents.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/ListOfUserDefinedConstraintComponents.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraintComponents.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraintComponents.h:59, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraintComponents.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraintComponents.cpp: In member function ‘UserDefinedConstraintComponent* ListOfUserDefinedConstraintComponents::createUserDefinedConstraintComponent()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraintComponents.cpp:270:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 270 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraintComponents.cpp: In member function ‘virtual SBase* ListOfUserDefinedConstraintComponents::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraintComponents.cpp:380:3: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 380 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/ListOfUserDefinedConstraints.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/ListOfUserDefinedConstraints.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/ListOfUserDefinedConstraints.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/ListOfUserDefinedConstraints.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraints.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraints.h:58, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraints.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraints.cpp: In member function ‘UserDefinedConstraint* ListOfUserDefinedConstraints::createUserDefinedConstraint()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraints.cpp:260:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 260 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraints.cpp: In member function ‘virtual SBase* ListOfUserDefinedConstraints::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/ListOfUserDefinedConstraints.cpp:405:3: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 405 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Objective.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Objective.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Objective.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Objective.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/Objective.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/Objective.h:139, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/Objective.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/Objective.cpp: In member function ‘FluxObjective* Objective::createFluxObjective()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/Objective.cpp:473:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 473 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/Objective.cpp: In member function ‘Objective* ListOfObjectives::createObjective()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/Objective.cpp:1435:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1435 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/Objective.cpp: In member function ‘virtual SBase* ListOfObjectives::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/Objective.cpp:1554:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 1554 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/UserDefinedConstraint.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/UserDefinedConstraint.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/UserDefinedConstraint.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/UserDefinedConstraint.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.h:58, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.cpp: In member function ‘UserDefinedConstraintComponent* UserDefinedConstraint::createUserDefinedConstraintComponent()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.cpp:544:5: note: in expansion of macro ‘FBC_CREATE_NS_WITH_VERSION’ 544 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.cpp: In member function ‘virtual void UserDefinedConstraint::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.cpp:1353:8: warning: unused variable ‘assigned’ [-Wunused-variable] 1353 | bool assigned = false; | ^~~~~~~~ [ 40%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:84, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.cpp: In member function ‘virtual void UserDefinedConstraintComponent::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.cpp:1109:8: warning: unused variable ‘assigned’ [-Wunused-variable] 1109 | bool assigned = false; | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.cpp: In member function ‘void UserDefinedConstraintComponent::readL3V1V3Attributes(const XMLAttributes&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.cpp:1195:16: warning: variable ‘numErrs’ set but not used [-Wunused-but-set-variable] 1195 | unsigned int numErrs; | ^~~~~~~ [ 40%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/CobraToFbcConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/CobraToFbcConverter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/CobraToFbcConverter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/CobraToFbcConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util/CobraToFbcConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util/CobraToFbcConverter.h:61, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util/CobraToFbcConverter.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 40%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcToCobraConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcToCobraConverter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcToCobraConverter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcToCobraConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util/FbcToCobraConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util/FbcToCobraConverter.h:61, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util/FbcToCobraConverter.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 40%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util/FbcV1ToV2Converter.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp:36: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 40%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util/FbcV2ToV1Converter.h:58, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp:36: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 40%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints/FbcConsistencyConstraints.cpp:39, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 40%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints/FbcIdentifierConsistencyConstraints.cpp:39, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 40%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/FbcValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/FbcValidator.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 40%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 40%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 40%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 40%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegister.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsExtension.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:70, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsModelPlugin.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:73: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp: In member function ‘Group* GroupsModelPlugin::createGroup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsExtension.h:75:1: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp:234:5: note: in expansion of macro ‘GROUPS_CREATE_NS’ 234 | GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLDocumentPlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.h:62, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Group.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Group.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Group.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Group.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/Group.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/Group.h:169, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/Group.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/Group.cpp: In member function ‘Member* Group::createMember()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsExtension.h:75:1: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/Group.cpp:450:5: note: in expansion of macro ‘GROUPS_CREATE_NS’ 450 | GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfGroups.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfGroups.h:77, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfGroups.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfGroups.cpp: In member function ‘Group* ListOfGroups::createGroup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsExtension.h:75:1: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfGroups.cpp:248:5: note: in expansion of macro ‘GROUPS_CREATE_NS’ 248 | GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfGroups.cpp: In member function ‘virtual SBase* ListOfGroups::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsExtension.h:75:1: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfGroups.cpp:308:3: note: in expansion of macro ‘GROUPS_CREATE_NS’ 308 | GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfMembers.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfMembers.h:105, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfMembers.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfMembers.cpp: In member function ‘Member* ListOfMembers::createMember()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsExtension.h:75:1: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfMembers.cpp:348:5: note: in expansion of macro ‘GROUPS_CREATE_NS’ 348 | GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfMembers.cpp: In member function ‘virtual SBase* ListOfMembers::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsExtension.h:75:1: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/ListOfMembers.cpp:459:3: note: in expansion of macro ‘GROUPS_CREATE_NS’ 459 | GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Member.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Member.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Member.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Member.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/Member.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/Member.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml/Member.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints/GroupsConsistencyConstraints.cpp:47, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints/GroupsIdentifierConsistencyConstraints.cpp:47, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/GroupsValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/GroupsValidator.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.h:55, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathASTPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathASTPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathASTPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathASTPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathASTPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathASTPlugin.h:50, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathASTPlugin.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathExtension.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathExtension.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegister.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathExtension.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathSBMLDocumentPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathSBMLDocumentPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathSBMLDocumentPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathSBMLDocumentPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathSBMLDocumentPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLDocumentPlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathSBMLDocumentPlugin.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathSBMLDocumentPlugin.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathMathMLConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathMathMLConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathMathMLConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathMathMLConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathMathMLConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathMathMLConsistencyConstraints.cpp:47, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathMathMLConsistencyValidator.cpp:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathUnitConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathUnitConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathUnitConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathUnitConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathUnitConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathUnitConsistencyConstraints.cpp:47, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathUnitConsistencyValidator.cpp:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathValidator.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMArgumentsUnitsCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMArgumentsUnitsCheck.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMArgumentsUnitsCheck.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMArgumentsUnitsCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMArgumentsUnitsCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMArgumentsUnitsCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMNumberArgsMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMNumberArgsMathCheck.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMNumberArgsMathCheck.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMNumberArgsMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMNumberArgsMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMNumberArgsMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathMathMLConsistencyConstraints.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathMathMLConsistencyConstraints.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathMathMLConsistencyConstraints.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathMathMLConsistencyConstraints.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathMathMLConsistencyConstraints.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathMathMLConsistencyConstraints.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathUnitConsistencyConstraints.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathUnitConsistencyConstraints.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathUnitConsistencyConstraints.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathUnitConsistencyConstraints.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathUnitConsistencyConstraints.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathUnitConsistencyConstraints.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutExtension.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutExtension.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegister.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutModelPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutModelPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutModelPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutModelPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:63: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:62: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp: In member function ‘Layout* LayoutModelPlugin::createLayout()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp:481:5: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 481 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLDocumentPlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.h:53, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.h:59: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/BoundingBox.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/BoundingBox.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/BoundingBox.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/BoundingBox.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/CompartmentGlyph.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/CompartmentGlyph.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/CompartmentGlyph.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/CompartmentGlyph.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/CubicBezier.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/CubicBezier.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/CubicBezier.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/CubicBezier.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Curve.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Curve.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Curve.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Curve.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.cpp: In member function ‘LineSegment* Curve::createLineSegment()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.cpp:362:3: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 362 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.cpp: In member function ‘CubicBezier* Curve::createCubicBezier()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.cpp:377:3: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 377 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.cpp: In member function ‘virtual SBase* ListOfLineSegments::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.cpp:645:5: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 645 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Dimensions.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Dimensions.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Dimensions.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Dimensions.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Dimensions.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Dimensions.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Dimensions.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:65: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:329:26: note: by ‘virtual GeneralGlyph& GeneralGlyph::operator=(const GeneralGlyph&)’ 329 | virtual GeneralGlyph& operator=(const GeneralGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.cpp: In member function ‘ReferenceGlyph* GeneralGlyph::createReferenceGlyph()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:648:3: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 648 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.cpp: In member function ‘virtual SBase* ListOfReferenceGlyphs::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:1175:5: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 1175 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:62: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:63: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:329:26: note: by ‘virtual GeneralGlyph& GeneralGlyph::operator=(const GeneralGlyph&)’ 329 | virtual GeneralGlyph& operator=(const GeneralGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.cpp: In member function ‘virtual SBase* ListOfGraphicalObjects::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.cpp:1207:3: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 1207 | LAYOUT_CREATE_NS(layoutns, this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Layout.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Layout.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Layout.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Layout.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Dimensions.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:329:26: note: by ‘virtual GeneralGlyph& GeneralGlyph::operator=(const GeneralGlyph&)’ 329 | virtual GeneralGlyph& operator=(const GeneralGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp: In member function ‘CompartmentGlyph* Layout::createCompartmentGlyph()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp:1367:3: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 1367 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp: In member function ‘SpeciesGlyph* Layout::createSpeciesGlyph()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp:1383:3: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 1383 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp: In member function ‘ReactionGlyph* Layout::createReactionGlyph()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp:1399:3: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 1399 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp: In member function ‘GeneralGlyph* Layout::createGeneralGlyph()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp:1414:3: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 1414 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp: In member function ‘TextGlyph* Layout::createTextGlyph()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp:1430:3: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 1430 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp: In member function ‘GraphicalObject* Layout::createAdditionalGraphicalObject()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp:1447:3: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 1447 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp: In member function ‘virtual SBase* ListOfLayouts::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp:2028:5: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 2028 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp: In member function ‘virtual SBase* ListOfCompartmentGlyphs::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp:2200:5: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 2200 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp: In member function ‘virtual SBase* ListOfSpeciesGlyphs::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp:2352:5: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 2352 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp: In member function ‘virtual SBase* ListOfReactionGlyphs::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp:2501:5: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 2501 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp: In member function ‘virtual SBase* ListOfTextGlyphs::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.cpp:2650:5: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 2650 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/LineSegment.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/LineSegment.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/LineSegment.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/LineSegment.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Point.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Point.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Point.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Point.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:70, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.cpp: In member function ‘SpeciesReferenceGlyph* ReactionGlyph::createSpeciesReferenceGlyph()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:499:3: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 499 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.cpp: In member function ‘virtual SBase* ListOfSpeciesReferenceGlyphs::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:976:5: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 976 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.cpp:40: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:329:26: note: by ‘virtual GeneralGlyph& GeneralGlyph::operator=(const GeneralGlyph&)’ 329 | virtual GeneralGlyph& operator=(const GeneralGlyph& source); | ^~~~~~~~ [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:58, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.cpp:40: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp:40: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/TextGlyph.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/TextGlyph.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/TextGlyph.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/TextGlyph.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:59, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/util/LayoutAnnotation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/util/LayoutAnnotation.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/util/LayoutAnnotation.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/util/LayoutAnnotation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.cpp:54: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/util/LayoutUtilities.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/util/LayoutUtilities.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/util/LayoutUtilities.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/util/LayoutUtilities.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/constraints/LayoutConsistencyConstraints.cpp:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/constraints/LayoutConsistencyConstraints.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:62: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:63: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:329:26: note: by ‘virtual GeneralGlyph& GeneralGlyph::operator=(const GeneralGlyph&)’ 329 | virtual GeneralGlyph& operator=(const GeneralGlyph& source); | ^~~~~~~~ [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/constraints/LayoutIdentifierConsistencyConstraints.cpp:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/LayoutValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/LayoutValidator.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/LayoutValidator.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:62: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:63: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:329:26: note: by ‘virtual GeneralGlyph& GeneralGlyph::operator=(const GeneralGlyph&)’ 329 | virtual GeneralGlyph& operator=(const GeneralGlyph& source); | ^~~~~~~~ [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/constraints/UniqueIdsLayout.h:55, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:329:26: note: by ‘virtual GeneralGlyph& GeneralGlyph::operator=(const GeneralGlyph&)’ 329 | virtual GeneralGlyph& operator=(const GeneralGlyph& source); | ^~~~~~~~ [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualExtension.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualExtension.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegister.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualModelPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:70, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualModelPlugin.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualModelPlugin.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:73: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualModelPlugin.cpp: In member function ‘QualitativeSpecies* QualModelPlugin::createQualitativeSpecies()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualModelPlugin.cpp:835:5: note: in expansion of macro ‘QUAL_CREATE_NS’ 835 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualModelPlugin.cpp: In member function ‘Transition* QualModelPlugin::createTransition()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualModelPlugin.cpp:1013:5: note: in expansion of macro ‘QUAL_CREATE_NS’ 1013 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLDocumentPlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualSBMLDocumentPlugin.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.h:77, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.cpp: In member function ‘DefaultTerm* ListOfFunctionTerms::createDefaultTerm()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.cpp:1068:5: note: in expansion of macro ‘QUAL_CREATE_NS’ 1068 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.cpp: In member function ‘virtual SBase* ListOfFunctionTerms::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.cpp:1125:3: note: in expansion of macro ‘QUAL_CREATE_NS’ 1125 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Input.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Input.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Input.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Input.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Input.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Input.h:107, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Input.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Input.cpp: In member function ‘virtual SBase* ListOfInputs::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Input.cpp:1342:5: note: in expansion of macro ‘QUAL_CREATE_NS’ 1342 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Output.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Output.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Output.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Output.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Output.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Output.h:98, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Output.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Output.cpp: In member function ‘virtual SBase* ListOfOutputs::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Output.cpp:1245:5: note: in expansion of macro ‘QUAL_CREATE_NS’ 1245 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.h:89, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp: In member function ‘virtual SBase* ListOfQualitativeSpecies::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp:1338:5: note: in expansion of macro ‘QUAL_CREATE_NS’ 1338 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Transition.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Transition.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Transition.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Transition.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Transition.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Transition.h:91, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Transition.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Transition.cpp: In member function ‘Input* Transition::createInput()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Transition.cpp:456:5: note: in expansion of macro ‘QUAL_CREATE_NS’ 456 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Transition.cpp: In member function ‘Output* Transition::createOutput()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Transition.cpp:636:5: note: in expansion of macro ‘QUAL_CREATE_NS’ 636 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Transition.cpp: In member function ‘FunctionTerm* Transition::createFunctionTerm()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Transition.cpp:790:5: note: in expansion of macro ‘QUAL_CREATE_NS’ 790 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Transition.cpp: In member function ‘virtual SBase* ListOfTransitions::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Transition.cpp:1755:5: note: in expansion of macro ‘QUAL_CREATE_NS’ 1755 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/QualConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/QualConsistencyConstraints.cpp:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/QualConsistencyValidator.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/QualIdentifierConsistencyConstraints.cpp:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/QualMathConsistencyConstraints.cpp:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 46%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/QualValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/QualValidator.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 46%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 46%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.h:55, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 46%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.h:55, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 46%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 46%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 46%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderExtension.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderExtension.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegister.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.cpp:36: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 46%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderGraphicalObjectPlugin.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 46%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCubicBezier.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common/RenderExtensionTypes.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp: In member function ‘LocalRenderInformation* RenderLayoutPlugin::createLocalRenderInformation()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp:450:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 450 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 46%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:62: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:63: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:329:26: note: by ‘virtual GeneralGlyph& GeneralGlyph::operator=(const GeneralGlyph&)’ 329 | virtual GeneralGlyph& operator=(const GeneralGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp: In member function ‘GlobalRenderInformation* RenderListOfLayoutsPlugin::createGlobalRenderInformation()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp:713:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 713 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 46%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLDocumentPlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderSBMLDocumentPlugin.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ColorDefinition.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ColorDefinition.cpp:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/DefaultValues.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/DefaultValues.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/DefaultValues.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/DefaultValues.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/DefaultValues.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GradientBase.h:102, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/DefaultValues.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/DefaultValues.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Ellipse.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Ellipse.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Ellipse.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Ellipse.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Ellipse.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Ellipse.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Ellipse.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Ellipse.cpp:65: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderInformationBase.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GlobalRenderInformation.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp: In member function ‘GlobalStyle* GlobalRenderInformation::createGlobalStyle()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp:365:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 365 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GlobalStyle.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GlobalStyle.h:74, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GlobalStyle.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GlobalStyle.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientBase.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientBase.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GradientBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GradientBase.h:102, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GradientBase.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GradientBase.cpp: In member function ‘GradientStop* GradientBase::createGradientStop()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GradientBase.cpp:565:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 565 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientStop.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientStop.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientStop.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientStop.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GradientStop.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GradientStop.h:84, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GradientStop.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GradientStop.cpp:56: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Image.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Image.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Image.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Image.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Image.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Transformation.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Transformation2D.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Image.h:76, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Image.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Image.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LineEnding.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LineEnding.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LineEnding.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LineEnding.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LineEnding.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LineEnding.h:77, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LineEnding.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LineEnding.cpp: In member function ‘RenderGroup* LineEnding::createGroup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LineEnding.cpp:540:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 540 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LineEnding.cpp: In member function ‘BoundingBox* LineEnding::createBoundingBox()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LineEnding.cpp:566:3: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 566 | LAYOUT_CREATE_NS(layoutns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LineEnding.cpp: In member function ‘virtual SBase* LineEnding::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LineEnding.cpp:1320:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 1320 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LineEnding.cpp:1322:3: note: in expansion of macro ‘LAYOUT_CREATE_NS’ 1322 | LAYOUT_CREATE_NS(layoutns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LineEnding.cpp: In member function ‘virtual void LineEnding::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LineEnding.cpp:1494:47: warning: ‘numErrs’ may be used uninitialized [-Wmaybe-uninitialized] 1494 | if (log && log->getNumErrors() == numErrs + 1 && | ~~~~~~~~^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LineEnding.cpp:1398:16: note: ‘numErrs’ was declared here 1398 | unsigned int numErrs; | ^~~~~~~ [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LinearGradient.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LinearGradient.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LinearGradient.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LinearGradient.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LinearGradient.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GradientBase.h:102, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LinearGradient.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LinearGradient.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LinearGradient.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 48%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfColorDefinitions.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:38: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp: In member function ‘ColorDefinition* ListOfColorDefinitions::createColorDefinition()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:295:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 295 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp: In member function ‘virtual SBase* ListOfColorDefinitions::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:367:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 367 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 48%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCubicBezier.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.h:75: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.cpp: In member function ‘RenderCubicBezier* ListOfCurveElements::createCubicBezier()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:324:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 324 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.cpp: In member function ‘virtual SBase* ListOfCurveElements::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:413:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 413 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 48%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function ‘Image* ListOfDrawables::createImage()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp:261:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 261 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function ‘Ellipse* ListOfDrawables::createEllipse()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp:289:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 289 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function ‘Rectangle* ListOfDrawables::createRectangle()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp:317:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 317 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function ‘Polygon* ListOfDrawables::createPolygon()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp:345:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 345 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function ‘RenderGroup* ListOfDrawables::createGroup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp:373:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 373 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function ‘LineEnding* ListOfDrawables::createLineEnding()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp:401:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 401 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function ‘Text* ListOfDrawables::createText()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp:429:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 429 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function ‘RenderCurve* ListOfDrawables::createCurve()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp:457:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 457 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function ‘virtual SBase* ListOfDrawables::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfDrawables.cpp:517:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 517 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 48%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.h:70, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function ‘DefaultValues* ListOfGlobalRenderInformation::createDefaultValues()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:429:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 429 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function ‘GlobalRenderInformation* ListOfGlobalRenderInformation::createGlobalRenderInformation()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:605:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 605 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function ‘virtual SBase* ListOfGlobalRenderInformation::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:842:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 842 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function ‘virtual void ListOfGlobalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:940:40: warning: ‘numErrs’ may be used uninitialized [-Wmaybe-uninitialized] 940 | if (log->getNumErrors() == numErrs + 1 && | ~~~~~~~~^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:898:16: note: ‘numErrs’ was declared here 898 | unsigned int numErrs; | ^~~~~~~ [ 48%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalStyles.h:70, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp: In member function ‘GlobalStyle* ListOfGlobalStyles::createGlobalStyle()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:283:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 283 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp: In member function ‘virtual SBase* ListOfGlobalStyles::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:348:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 348 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 48%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientDefinitions.h:70, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:38: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function ‘LinearGradient* ListOfGradientDefinitions::createLinearGradient()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:306:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 306 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function ‘RadialGradient* ListOfGradientDefinitions::createRadialGradient()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:335:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 335 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function ‘virtual SBase* ListOfGradientDefinitions::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:395:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 395 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 48%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientStops.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientStops.h:84, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientStops.cpp: In member function ‘GradientStop* ListOfGradientStops::createGradientStop()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:304:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 304 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientStops.cpp: In member function ‘virtual SBase* ListOfGradientStops::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:364:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 364 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 48%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLineEndings.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLineEndings.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:38: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLineEndings.cpp: In member function ‘LineEnding* ListOfLineEndings::createLineEnding()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:295:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 295 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLineEndings.cpp: In member function ‘virtual SBase* ListOfLineEndings::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:369:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 369 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 48%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function ‘DefaultValues* ListOfLocalRenderInformation::createDefaultValues()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:426:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 426 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function ‘LocalRenderInformation* ListOfLocalRenderInformation::createLocalRenderInformation()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:586:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 586 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function ‘virtual SBase* ListOfLocalRenderInformation::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:792:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 792 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function ‘virtual void ListOfLocalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:890:40: warning: ‘numErrs’ may be used uninitialized [-Wmaybe-uninitialized] 890 | if (log->getNumErrors() == numErrs + 1 && | ~~~~~~~~^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:848:16: note: ‘numErrs’ was declared here 848 | unsigned int numErrs; | ^~~~~~~ [ 48%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalStyles.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp: In member function ‘LocalStyle* ListOfLocalStyles::createLocalStyle()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:299:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 299 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp: In member function ‘virtual SBase* ListOfLocalStyles::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:364:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 364 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 48%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LocalRenderInformation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderInformationBase.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LocalRenderInformation.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:56: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LocalRenderInformation.cpp: In member function ‘LocalStyle* LocalRenderInformation::createLocalStyle()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:339:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 339 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LocalRenderInformation.cpp: In member function ‘LocalStyle* LocalRenderInformation::createStyle(const std::string&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:363:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 363 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 48%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalStyle.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalStyle.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalStyle.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalStyle.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LocalStyle.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LocalStyle.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LocalStyle.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LocalStyle.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/LocalStyle.cpp:59: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Polygon.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Polygon.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Polygon.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Polygon.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCubicBezier.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.h:75: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.cpp: In constructor ‘Polygon::Polygon(const XMLNode&, unsigned int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.cpp:124:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 124 | RENDER_CREATE_NS(renderns, this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.cpp: In member function ‘RenderPoint* Polygon::createPoint()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.cpp:421:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 421 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.cpp: In member function ‘RenderCubicBezier* Polygon::createCubicBezier()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.cpp:449:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 449 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RadialGradient.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RadialGradient.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RadialGradient.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RadialGradient.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RadialGradient.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GradientBase.h:102, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RadialGradient.h:80, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RadialGradient.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RadialGradient.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Rectangle.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Rectangle.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Rectangle.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Rectangle.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Rectangle.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Rectangle.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Rectangle.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Rectangle.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RelAbsVector.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RelAbsVector.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RelAbsVector.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RelAbsVector.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RelAbsVector.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RelAbsVector.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RelAbsVector.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCubicBezier.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCubicBezier.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCubicBezier.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCubicBezier.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCurve.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCurve.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCurve.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCurve.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCurve.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Dimensions.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCurve.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCurve.cpp: In member function ‘RenderPoint* RenderCurve::createPoint()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCurve.cpp:473:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 473 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCurve.cpp: In member function ‘RenderCubicBezier* RenderCurve::createCubicBezier()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCurve.cpp:501:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 501 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderGroup.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderGroup.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderGroup.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderGroup.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.h:76, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCubicBezier.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp:56: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp:65: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function ‘Image* RenderGroup::createImage()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp:1110:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 1110 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function ‘Ellipse* RenderGroup::createEllipse()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp:1138:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 1138 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function ‘Rectangle* RenderGroup::createRectangle()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp:1166:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 1166 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function ‘Polygon* RenderGroup::createPolygon()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp:1194:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 1194 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function ‘RenderGroup* RenderGroup::createGroup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp:1222:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 1222 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function ‘LineEnding* RenderGroup::createLineEnding()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp:1250:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 1250 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function ‘Text* RenderGroup::createText()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp:1278:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 1278 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function ‘RenderCurve* RenderGroup::createCurve()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp:1306:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 1306 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function ‘void RenderGroup::importOldCurve(const XMLNode&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.cpp:2623:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 2623 | RENDER_CREATE_NS(renderns, this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderInformationBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderInformationBase.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderInformationBase.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function ‘ColorDefinition* RenderInformationBase::createColorDefinition()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderInformationBase.cpp:734:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 734 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function ‘LinearGradient* RenderInformationBase::createLinearGradientDefinition()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderInformationBase.cpp:892:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 892 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function ‘RadialGradient* RenderInformationBase::createRadialGradientDefinition()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderInformationBase.cpp:920:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 920 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function ‘LineEnding* RenderInformationBase::createLineEnding()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderInformationBase.cpp:1078:5: note: in expansion of macro ‘RENDER_CREATE_NS’ 1078 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderPoint.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderPoint.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderPoint.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderPoint.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderPoint.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderPoint.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderPoint.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCubicBezier.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderPoint.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderPoint.cpp:61: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Style.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Style.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Style.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Style.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.cpp: In member function ‘bool Style::isSetGroup() const’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.cpp:564:19: warning: the address of ‘Style::mGroup’ will never be NULL [-Waddress] 564 | return (&mGroup != NULL); | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.h:92:15: note: ‘Style::mGroup’ declared here 92 | RenderGroup mGroup; | ^~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.cpp: In member function ‘RenderGroup* Style::createGroup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.cpp:597:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 597 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.cpp: In member function ‘virtual SBase* Style::getElementBySId(const std::string&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.cpp:1179:15: warning: the address of ‘Style::mGroup’ will never be NULL [-Waddress] 1179 | if (&mGroup != NULL) | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.h:92:15: note: ‘Style::mGroup’ declared here 92 | RenderGroup mGroup; | ^~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.cpp: In member function ‘virtual SBase* Style::getElementByMetaId(const std::string&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.cpp:1211:15: warning: the address of ‘Style::mGroup’ will never be NULL [-Waddress] 1211 | if (&mGroup != NULL) | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.h:92:15: note: ‘Style::mGroup’ declared here 92 | RenderGroup mGroup; | ^~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.cpp: In member function ‘virtual SBase* Style::createObject(XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type ‘class SBMLExtensionException’ by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro ‘EXTENSION_CREATE_NS_WITH_VERSION’ 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro ‘EXTENSION_CREATE_NS’ 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.cpp:1270:3: note: in expansion of macro ‘RENDER_CREATE_NS’ 1270 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Text.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Text.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Text.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Text.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Text.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Text.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Text.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Text.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Transformation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Transformation.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Transformation.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 50%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation2D.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation2D.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation2D.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation2D.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Transformation2D.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Transformation.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Transformation2D.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Transformation2D.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 50%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util/RenderLayoutConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util/RenderLayoutConverter.h:62, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util/RenderLayoutConverter.cpp:36: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCubicBezier.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common/RenderExtensionTypes.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util/RenderLayoutConverter.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util/RenderLayoutConverter.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:62: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:63: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:329:26: note: by ‘virtual GeneralGlyph& GeneralGlyph::operator=(const GeneralGlyph&)’ 329 | virtual GeneralGlyph& operator=(const GeneralGlyph& source); | ^~~~~~~~ [ 50%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderUtilities.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderUtilities.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderUtilities.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderUtilities.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util/RenderUtilities.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common/RenderExtensionTypes.h:50, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util/RenderUtilities.h:40, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util/RenderUtilities.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCubicBezier.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common/RenderExtensionTypes.h:75: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util/RenderUtilities.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:62: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:63: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:329:26: note: by ‘virtual GeneralGlyph& GeneralGlyph::operator=(const GeneralGlyph&)’ 329 | virtual GeneralGlyph& operator=(const GeneralGlyph& source); | ^~~~~~~~ [ 50%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/RenderConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints/RenderConsistencyConstraints.cpp:43, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/RenderConsistencyValidator.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 50%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints/RenderIdentifierConsistencyConstraints.cpp:43, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 50%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/RenderValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/RenderValidator.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 50%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/CVTerm.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/annotation/CVTerm.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/annotation/CVTerm.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/annotation/CVTerm.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/CVTerm.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/CVTerm.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/CVTerm.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 50%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/Date.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/annotation/Date.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/annotation/Date.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/annotation/Date.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp: In member function ‘void Date::parseDateNumbersToString()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:463:29: warning: ‘%u’ directive output may be truncated writing between 2 and 10 bytes into a region of size between 0 and 8 [-Wformat-truncation=] 463 | snprintf(cdate, 10, "%u-%u-", mYear, mMonth); | ^~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:463:25: note: directive argument in the range [10, 4294967295] 463 | snprintf(cdate, 10, "%u-%u-", mYear, mMonth); | ^~~~~~~~ In file included from /usr/include/stdio.h:970, from /usr/include/c++/15/cstdio:47, from /usr/include/c++/15/ext/string_conversions.h:47, from /usr/include/c++/15/bits/basic_string.h:4444, from /usr/include/c++/15/string:56, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLAttributes.h:243, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLToken.h:126, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLNode.h:160, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.h:193, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:39: In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘void Date::parseDateNumbersToString()’ at /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:463:13: /usr/include/riscv64-linux-gnu/bits/stdio2.h:68:35: note: ‘__builtin___snprintf_chk’ output between 6 and 23 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp: In member function ‘void Date::parseDateNumbersToString()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:469:28: warning: ‘T’ directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] 469 | snprintf(cdate, 10, "%uT", mDay); | ^ In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘void Date::parseDateNumbersToString()’ at /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:469:13: /usr/include/riscv64-linux-gnu/bits/stdio2.h:68:35: note: ‘__builtin___snprintf_chk’ output between 4 and 12 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp: In member function ‘void Date::parseDateNumbersToString()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:475:28: warning: ‘:’ directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] 475 | snprintf(cdate, 10, "%u:", mHour); | ^ In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘void Date::parseDateNumbersToString()’ at /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:475:13: /usr/include/riscv64-linux-gnu/bits/stdio2.h:68:35: note: ‘__builtin___snprintf_chk’ output between 4 and 12 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp: In member function ‘void Date::parseDateNumbersToString()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:481:28: warning: ‘:’ directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] 481 | snprintf(cdate, 10, "%u:", mMinute); | ^ In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘void Date::parseDateNumbersToString()’ at /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:481:13: /usr/include/riscv64-linux-gnu/bits/stdio2.h:68:35: note: ‘__builtin___snprintf_chk’ output between 4 and 12 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp: In member function ‘void Date::parseDateNumbersToString()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:487:28: warning: ‘__builtin___snprintf_chk’ output may be truncated before the last format character [-Wformat-truncation=] 487 | snprintf(cdate, 10, "%u", mSecond); | ^ In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘void Date::parseDateNumbersToString()’ at /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:487:13: /usr/include/riscv64-linux-gnu/bits/stdio2.h:68:35: note: ‘__builtin___snprintf_chk’ output between 3 and 11 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp: In member function ‘void Date::parseDateNumbersToString()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:506:30: warning: ‘:’ directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] 506 | snprintf(cdate, 10, "%u:", mHoursOffset); | ^ In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘void Date::parseDateNumbersToString()’ at /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:506:15: /usr/include/riscv64-linux-gnu/bits/stdio2.h:68:35: note: ‘__builtin___snprintf_chk’ output between 4 and 12 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp: In member function ‘void Date::parseDateNumbersToString()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:512:30: warning: ‘__builtin___snprintf_chk’ output may be truncated before the last format character [-Wformat-truncation=] 512 | snprintf(cdate, 10, "%u", mMinutesOffset); | ^ In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘void Date::parseDateNumbersToString()’ at /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/Date.cpp:512:15: /usr/include/riscv64-linux-gnu/bits/stdio2.h:68:35: note: ‘__builtin___snprintf_chk’ output between 3 and 11 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [ 50%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/ModelCreator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension 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CMakeFiles/sbml-static.dir/sbml/annotation/ModelCreator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/annotation/ModelCreator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/ModelCreator.cpp [ 50%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/ModelHistory.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml 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CMakeFiles/sbml-static.dir/sbml/annotation/ModelHistory.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/annotation/ModelHistory.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/ModelHistory.cpp [ 50%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/RDFAnnotationParser.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/annotation/RDFAnnotationParser.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/annotation/RDFAnnotationParser.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/annotation/RDFAnnotationParser.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/RDFAnnotationParser.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/RDFAnnotationParser.cpp:40: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/RDFAnnotationParser.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/common/libsbml-version.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/common/libsbml-version.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/common/libsbml-version.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/common/libsbml-version.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/common/libsbml-version.cpp [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/common/operationReturnValues.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/common/operationReturnValues.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/common/operationReturnValues.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/common/operationReturnValues.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/common/operationReturnValues.cpp [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/ConversionOption.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/conversion/ConversionOption.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/conversion/ConversionOption.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/conversion/ConversionOption.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/ConversionOption.cpp [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/ConversionProperties.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/conversion/ConversionProperties.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/conversion/ConversionProperties.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/conversion/ConversionProperties.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/ConversionProperties.cpp [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/ExpressionAnalyser.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common 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-D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/conversion/ExpressionAnalyser.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/conversion/ExpressionAnalyser.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/conversion/ExpressionAnalyser.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/ExpressionAnalyser.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/ExpressionAnalyser.h:58, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/ExpressionAnalyser.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/ExpressionAnalyser.cpp: In member function ‘void ExpressionAnalyser::detectHiddenSpecies(List*)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/ExpressionAnalyser.cpp:414:14: warning: unused variable ‘currentNode’ [-Wunused-variable] 414 | ASTNode* currentNode = exp->current; | ^~~~~~~~~~~ [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/RegisterConverters.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/conversion/RegisterConverters.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/conversion/RegisterConverters.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/conversion/RegisterConverters.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/RegisterConverters.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLFunctionDefinitionConverter.h:85, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/RegisterConverters.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverterRegistry.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverterRegistry.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverterRegistry.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverterRegistry.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverterRegistry.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverterRegistry.h:70, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverterRegistry.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLFunctionDefinitionConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLFunctionDefinitionConverter.h:85, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLFunctionDefinitionConverter.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLIdConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLIdConverter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/conversion/SBMLIdConverter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLIdConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLIdConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLIdConverter.h:87, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLIdConverter.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLInferUnitsConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLInferUnitsConverter.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLInferUnitsConverter.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLInitialAssignmentConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLInitialAssignmentConverter.h:98, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLInitialAssignmentConverter.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 52%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLLevel1Version1Converter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLLevel1Version1Converter.h:92, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLLevel1Version1Converter.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 52%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLLevelVersionConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLLevelVersionConverter.h:94, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLLevelVersionConverter.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLLevelVersionConverter.cpp:54: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 52%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLLocalParameterConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLLocalParameterConverter.h:74, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLLocalParameterConverter.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 52%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRateOfConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRateOfConverter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRateOfConverter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRateOfConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLRateOfConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLRateOfConverter.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLRateOfConverter.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 52%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRateRuleConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRateRuleConverter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRateRuleConverter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRateRuleConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLRateRuleConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLRateRuleConverter.h:62, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLRateRuleConverter.cpp:36: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 52%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLReactionConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLReactionConverter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/conversion/SBMLReactionConverter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLReactionConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLReactionConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLReactionConverter.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLReactionConverter.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 52%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRuleConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRuleConverter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRuleConverter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRuleConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLRuleConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLRuleConverter.h:97, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLRuleConverter.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 52%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLStripPackageConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLStripPackageConverter.h:81, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLStripPackageConverter.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 52%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLUnitsConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLUnitsConverter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/conversion/SBMLUnitsConverter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLUnitsConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLUnitsConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLUnitsConverter.h:80, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLUnitsConverter.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 52%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/ASTBasePlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/extension/ASTBasePlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/extension/ASTBasePlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/extension/ASTBasePlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h: In copy constructor ‘ASTBasePlugin::ASTBasePlugin(const ASTBasePlugin&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:487:24: warning: ‘ASTBasePlugin::mExtendedMathType’ will be initialized after [-Wreorder] 487 | ExtendedMathType_t mExtendedMathType; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:486:34: warning: ‘std::vector ASTBasePlugin::mPkgASTNodeValues’ [-Wreorder] 486 | std::vector mPkgASTNodeValues; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.cpp:314:1: warning: when initialized here [-Wreorder] 314 | ASTBasePlugin::ASTBasePlugin(const ASTBasePlugin& orig) | ^~~~~~~~~~~~~ [ 52%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ISBMLExtensionNamespaces.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegistry.h:59, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ISBMLExtensionNamespaces.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 52%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLDocumentPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLDocumentPlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLDocumentPlugin.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 53%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLDocumentPluginNotRequired.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLDocumentPlugin.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLDocumentPluginNotRequired.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLDocumentPluginNotRequired.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 53%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtension.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtension.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 53%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionException.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionException.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionException.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionException.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionException.cpp [ 53%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionNamespaces.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegistry.h:59, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionNamespaces.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 53%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionRegistry.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionRegistry.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionRegistry.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionRegistry.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegistry.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegistry.h:59, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegistry.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegistry.cpp: In member function ‘bool SBMLExtensionRegistry::setEnabled(const std::string&, bool)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegistry.cpp:368:42: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 368 | return (sbmlext) ? sbmlext->mIsEnabled = isEnabled : false; | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegistry.cpp:368:42: warning: suggest parentheses around assignment used as truth value [-Wparentheses] [ 53%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBaseExtensionPoint.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/extension/SBaseExtensionPoint.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/extension/SBaseExtensionPoint.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/extension/SBaseExtensionPoint.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBaseExtensionPoint.cpp [ 53%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBasePlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/extension/SBasePlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/extension/SBasePlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/extension/SBasePlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:70, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 53%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBasePluginCreatorBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/extension/SBasePluginCreatorBase.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/extension/SBasePluginCreatorBase.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/extension/SBasePluginCreatorBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 53%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/AlgebraicRule.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/AlgebraicRule.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/AlgebraicRule.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/AlgebraicRule.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/AlgebraicRule.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/AlgebraicRule.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 53%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/AssignmentRule.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/AssignmentRule.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/AssignmentRule.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/AssignmentRule.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/AssignmentRule.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/AssignmentRule.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 53%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Compartment.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/Compartment.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/Compartment.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/Compartment.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Compartment.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Compartment.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 53%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/CompartmentType.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/CompartmentType.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/CompartmentType.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/CompartmentType.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/CompartmentType.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/CompartmentType.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Constraint.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/Constraint.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/Constraint.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/Constraint.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Constraint.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Constraint.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Delay.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/Delay.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/Delay.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/Delay.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Delay.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Delay.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Event.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/Event.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/Event.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/Event.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Event.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Event.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/EventAssignment.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/EventAssignment.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/EventAssignment.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/EventAssignment.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/EventAssignment.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/EventAssignment.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/ExpectedAttributes.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/ExpectedAttributes.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/ExpectedAttributes.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/ExpectedAttributes.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/ExpectedAttributes.cpp [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/FunctionDefinition.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/FunctionDefinition.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/FunctionDefinition.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/FunctionDefinition.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/FunctionDefinition.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/FunctionDefinition.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/InitialAssignment.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/InitialAssignment.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/InitialAssignment.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/InitialAssignment.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/InitialAssignment.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/InitialAssignment.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/KineticLaw.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/KineticLaw.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/KineticLaw.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/KineticLaw.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/KineticLaw.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/KineticLaw.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/ListOf.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/ListOf.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/ListOf.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/ListOf.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/ListOf.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePlugin.h:70, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/ListOf.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/LocalParameter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/LocalParameter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/LocalParameter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/LocalParameter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/LocalParameter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/LocalParameter.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Model.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/Model.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/Model.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/Model.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.cpp: In member function ‘void Model::createConstraintUnitsData(UnitFormulaFormatter*)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.cpp:6447:32: warning: ‘%u’ directive writing between 1 and 10 bytes into a region of size 4 [-Wformat-overflow=] 6447 | sprintf(newId, "constraint_%u", n); | ^~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.cpp:6447:20: note: directive argument in the range [0, 4294967294] 6447 | sprintf(newId, "constraint_%u", n); | ^~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:970, from /usr/include/c++/15/cstdio:47, from /usr/include/c++/15/ext/string_conversions.h:47, from /usr/include/c++/15/bits/basic_string.h:4444, from /usr/include/c++/15/string:56, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLAttributes.h:243, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLToken.h:126, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLNode.h:160, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.cpp:42: In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘void Model::createConstraintUnitsData(UnitFormulaFormatter*)’ at /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.cpp:6447:12: /usr/include/riscv64-linux-gnu/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output between 13 and 22 bytes into a destination of size 15 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.cpp: In member function ‘void Model::createEventUnitsData(UnitFormulaFormatter*)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.cpp:6650:27: warning: ‘%u’ directive writing between 1 and 10 bytes into a region of size 6 [-Wformat-overflow=] 6650 | sprintf(newId, "event_%u", countEvents); | ^~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.cpp:6650:20: note: directive argument in the range [0, 4294967294] 6650 | sprintf(newId, "event_%u", countEvents); | ^~~~~~~~~~ In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘void Model::createEventUnitsData(UnitFormulaFormatter*)’ at /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.cpp:6650:12: /usr/include/riscv64-linux-gnu/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output between 8 and 17 bytes into a destination of size 12 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [ 55%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/ModifierSpeciesReference.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/ModifierSpeciesReference.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/ModifierSpeciesReference.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/ModifierSpeciesReference.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/ModifierSpeciesReference.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/ModifierSpeciesReference.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 55%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Parameter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/Parameter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/Parameter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/Parameter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Parameter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Parameter.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 55%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Priority.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/Priority.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/Priority.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/Priority.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Priority.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Priority.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 55%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/RateRule.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/RateRule.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/RateRule.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/RateRule.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/RateRule.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/RateRule.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 55%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Reaction.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/Reaction.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/Reaction.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/Reaction.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Reaction.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Reaction.cpp:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 55%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Rule.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/Rule.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/Rule.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/Rule.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Rule.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Rule.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 55%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLConstructorException.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SBMLConstructorException.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SBMLConstructorException.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SBMLConstructorException.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLConstructorException.cpp [ 55%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLConvert.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SBMLConvert.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SBMLConvert.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SBMLConvert.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLConvert.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLConvert.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 55%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLDocument.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SBMLDocument.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SBMLDocument.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SBMLDocument.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBMLValidator.h:84, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBMLInternalValidator.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.cpp:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 55%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLError.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SBMLError.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SBMLError.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SBMLError.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLError.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegistry.h:59, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLError.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 55%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLErrorLog.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SBMLErrorLog.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SBMLErrorLog.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SBMLErrorLog.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 55%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLNamespaces.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SBMLNamespaces.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SBMLNamespaces.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SBMLNamespaces.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLNamespaces.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegistry.h:59, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLNamespaces.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLReader.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SBMLReader.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SBMLReader.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SBMLReader.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLReader.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLReader.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLReader.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLTransforms.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SBMLTransforms.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SBMLTransforms.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SBMLTransforms.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLTypeCodes.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SBMLTypeCodes.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SBMLTypeCodes.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SBMLTypeCodes.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypeCodes.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypeCodes.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLVisitor.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SBMLVisitor.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SBMLVisitor.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SBMLVisitor.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLVisitor.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLVisitor.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLWriter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SBMLWriter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SBMLWriter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SBMLWriter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLWriter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLWriter.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBO.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SBO.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SBO.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SBO.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBO.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBO.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBO.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SBase.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SBase.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.cpp:58: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.cpp: In member function ‘virtual int SBase::setAnnotation(const XMLNode*)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.cpp:1398:8: warning: variable ‘hasNestedTerms’ set but not used [-Wunused-but-set-variable] 1398 | bool hasNestedTerms = false; | ^~~~~~~~~~~~~~ [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SimpleSpeciesReference.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SimpleSpeciesReference.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SimpleSpeciesReference.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SimpleSpeciesReference.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SimpleSpeciesReference.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SimpleSpeciesReference.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Species.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/Species.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/Species.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/Species.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Species.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Species.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SpeciesReference.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SpeciesReference.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SpeciesReference.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SpeciesReference.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SpeciesReference.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SpeciesReference.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SpeciesType.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SpeciesType.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SpeciesType.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SpeciesType.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SpeciesType.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SpeciesType.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/StoichiometryMath.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/StoichiometryMath.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/StoichiometryMath.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/StoichiometryMath.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/StoichiometryMath.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/StoichiometryMath.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 57%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SyntaxChecker.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SyntaxChecker.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SyntaxChecker.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SyntaxChecker.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SyntaxChecker.cpp [ 57%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Trigger.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/Trigger.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/Trigger.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/Trigger.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Trigger.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Trigger.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 57%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Unit.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/Unit.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/Unit.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/Unit.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Unit.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Unit.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 57%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/UnitDefinition.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/UnitDefinition.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/UnitDefinition.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/UnitDefinition.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/UnitDefinition.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/UnitDefinition.cpp:55: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 57%] Building C object src/CMakeFiles/sbml-static.dir/sbml/UnitKind.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/UnitKind.c.o -MF CMakeFiles/sbml-static.dir/sbml/UnitKind.c.o.d -o CMakeFiles/sbml-static.dir/sbml/UnitKind.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/UnitKind.c [ 57%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/html2md/html2md.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/html2md/html2md.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/html2md/html2md.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/html2md/html2md.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/html2md/html2md.cpp /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/html2md/html2md.cpp: In member function ‘html2md::Converter* html2md::Converter::appendToMd(const char*)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/html2md/html2md.cpp:197:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 197 | for (auto i = 0; i < str_len; ++i) { | ~~^~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/html2md/html2md.cpp: In member function ‘bool html2md::Converter::ParseCharInTagContent(char)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/html2md/html2md.cpp:520:27: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 520 | if (chars_in_curr_line_ > option.softBreak && !is_in_table_ && !is_in_list_ && | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/html2md/html2md.cpp:526:36: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 526 | } else if (chars_in_curr_line_ > option.hardBreak) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/html2md/html2md.cpp: In member function ‘bool html2md::Converter::ReplacePreviousSpaceInLineByNewline()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/html2md/html2md.cpp:536:20: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 536 | is_in_table_ && (prev_tag_ != kTagCode && prev_tag_ != kTagPre)) | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 57%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/html2md/table.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/html2md/table.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/html2md/table.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/html2md/table.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/html2md/table.cpp [ 57%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTNode.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/math/ASTNode.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/math/ASTNode.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/math/ASTNode.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp: In member function ‘ASTNode* ASTNode::combineNumbers(std::vector&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_PLUS’ not handled in switch [-Wswitch] 3730 | switch (mType) | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_TIMES’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_INTEGER’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_REAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_REAL_E’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_RATIONAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_NAME’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_NAME_AVOGADRO’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_NAME_TIME’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CONSTANT_E’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CONSTANT_FALSE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CONSTANT_PI’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CONSTANT_TRUE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LAMBDA’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ABS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ARCCOS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ARCCOSH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ARCCOT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ARCCOTH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ARCCSC’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ARCCSCH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ARCSEC’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ARCSECH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ARCSIN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ARCSINH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ARCTAN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ARCTANH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_CEILING’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_COS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_COSH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_COT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_COTH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_CSC’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_CSCH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_DELAY’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_EXP’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_FACTORIAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_FLOOR’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_LN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_LOG’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_PIECEWISE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_ROOT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_SEC’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_SECH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_SIN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_SINH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_TAN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_TANH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LOGICAL_AND’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LOGICAL_NOT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LOGICAL_OR’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LOGICAL_XOR’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_RELATIONAL_EQ’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_RELATIONAL_GEQ’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_RELATIONAL_GT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_RELATIONAL_LEQ’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_RELATIONAL_LT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_RELATIONAL_NEQ’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_END_OF_CORE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_MAX’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_MIN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_QUOTIENT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_RATE_OF’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_FUNCTION_REM’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LOGICAL_IMPLIES’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CSYMBOL_FUNCTION’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_DISTRIB_FUNCTION_NORMAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_DISTRIB_FUNCTION_UNIFORM’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_DISTRIB_FUNCTION_BERNOULLI’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_DISTRIB_FUNCTION_BINOMIAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_DISTRIB_FUNCTION_CAUCHY’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_DISTRIB_FUNCTION_CHISQUARE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_DISTRIB_FUNCTION_EXPONENTIAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_DISTRIB_FUNCTION_GAMMA’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_DISTRIB_FUNCTION_LAPLACE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_DISTRIB_FUNCTION_LOGNORMAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_DISTRIB_FUNCTION_POISSON’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_DISTRIB_FUNCTION_RAYLEIGH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LINEAR_ALGEBRA_VECTOR’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LINEAR_ALGEBRA_SELECTOR’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LINEAR_ALGEBRA_MATRIX’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LINEAR_ALGEBRA_MATRIXROW’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LINEAR_ALGEBRA_DETERMINANT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LINEAR_ALGEBRA_TRANSPOSE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LINEAR_ALGEBRA_VECTOR_PRODUCT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LINEAR_ALGEBRA_SCALAR_PRODUCT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LINEAR_ALGEBRA_OUTER_PRODUCT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LOGICAL_EXISTS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_LOGICAL_FORALL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_STATISTICS_MEAN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_STATISTICS_MEDIAN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_STATISTICS_MODE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_STATISTICS_MOMENT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_STATISTICS_SDEV’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_STATISTICS_VARIANCE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_STATISTICS_MOMENTABOUT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SERIES_PRODUCT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SERIES_SUM’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SERIES_LIMIT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SERIES_TENDSTO’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_ALGEBRA_GCD’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_ALGEBRA_CONJUGATE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_ALGEBRA_ARG’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_ALGEBRA_REAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_ALGEBRA_IMAGINARY’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_ALGEBRA_LCM’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_RELATIONS_EQUIVALENT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_RELATIONS_APPROX’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_RELATIONS_FACTOROF’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CALCULUS_INT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CALCULUS_DIFF’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CALCULUS_PARTIALDIFF’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CALCULUS_LOWLIMIT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CALCULUS_UPLIMIT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CALCULUS_DIVERGENCE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CALCULUS_GRAD’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CALCULUS_CURL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CALCULUS_LAPLACIAN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SET_THEORY_SET’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SET_THEORY_LIST’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SET_THEORY_UNION’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SET_THEORY_INTERSECT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SET_THEORY_IN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SET_THEORY_NOTIN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SET_THEORY_SUBSET’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SET_THEORY_PRSUBSET’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SET_THEORY_NOTSUBSET’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SET_THEORY_NOTPRSUBSET’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SET_THEORY_SETDIFF’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SET_THEORY_CARD’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_SET_THEORY_CARTESIANPRODUCT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CONSTANT_IMAGINARYI’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CONSTANTS_INTEGERS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CONSTANTS_REALS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CONSTANTS_RATIONALS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CONSTANTS_NATURALNUMBERS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CONSTANTS_COMPLEXES’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CONSTANTS_PRIMES’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CONSTANTS_EMPTYSET’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_CONSTANTS_EULERGAMMA’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_BASIC_CONTENT_INTERVAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_BASIC_CONTENT_INVERSE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_BASIC_CONTENT_CONDITION’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_BASIC_CONTENT_DECLARE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_BASIC_CONTENT_COMPOSE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_BASIC_CONTENT_IDENT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_BASIC_CONTENT_DOMAIN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_BASIC_CONTENT_CODOMAIN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_BASIC_CONTENT_IMAGE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_BASIC_CONTENT_DOMAINOFAPPLICATION’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3730:12: warning: enumeration value ‘AST_UNKNOWN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_MINUS’ not handled in switch [-Wswitch] 3749 | switch (mType) | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_DIVIDE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_POWER’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_INTEGER’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_REAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_REAL_E’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_RATIONAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_NAME’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_NAME_AVOGADRO’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_NAME_TIME’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CONSTANT_E’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CONSTANT_FALSE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CONSTANT_PI’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CONSTANT_TRUE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LAMBDA’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ABS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ARCCOS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ARCCOSH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ARCCOT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ARCCOTH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ARCCSC’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ARCCSCH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ARCSEC’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ARCSECH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ARCSIN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ARCSINH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ARCTAN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ARCTANH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_CEILING’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_COS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_COSH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_COT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_COTH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_CSC’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_CSCH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_DELAY’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_EXP’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_FACTORIAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_FLOOR’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_LN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_LOG’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_PIECEWISE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_POWER’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_ROOT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_SEC’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_SECH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_SIN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_SINH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_TAN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_TANH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LOGICAL_AND’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LOGICAL_NOT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LOGICAL_OR’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LOGICAL_XOR’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_RELATIONAL_EQ’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_RELATIONAL_GEQ’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_RELATIONAL_GT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_RELATIONAL_LEQ’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_RELATIONAL_LT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_RELATIONAL_NEQ’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_END_OF_CORE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_MAX’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_MIN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_QUOTIENT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_RATE_OF’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_FUNCTION_REM’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LOGICAL_IMPLIES’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CSYMBOL_FUNCTION’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_DISTRIB_FUNCTION_NORMAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_DISTRIB_FUNCTION_UNIFORM’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_DISTRIB_FUNCTION_BERNOULLI’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_DISTRIB_FUNCTION_BINOMIAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_DISTRIB_FUNCTION_CAUCHY’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_DISTRIB_FUNCTION_CHISQUARE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_DISTRIB_FUNCTION_EXPONENTIAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_DISTRIB_FUNCTION_GAMMA’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_DISTRIB_FUNCTION_LAPLACE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_DISTRIB_FUNCTION_LOGNORMAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_DISTRIB_FUNCTION_POISSON’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_DISTRIB_FUNCTION_RAYLEIGH’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LINEAR_ALGEBRA_VECTOR’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LINEAR_ALGEBRA_SELECTOR’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LINEAR_ALGEBRA_MATRIX’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LINEAR_ALGEBRA_MATRIXROW’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LINEAR_ALGEBRA_DETERMINANT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LINEAR_ALGEBRA_TRANSPOSE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LINEAR_ALGEBRA_VECTOR_PRODUCT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LINEAR_ALGEBRA_SCALAR_PRODUCT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LINEAR_ALGEBRA_OUTER_PRODUCT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LOGICAL_EXISTS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_LOGICAL_FORALL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_STATISTICS_MEAN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_STATISTICS_MEDIAN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_STATISTICS_MODE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_STATISTICS_MOMENT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_STATISTICS_SDEV’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_STATISTICS_VARIANCE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_STATISTICS_MOMENTABOUT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SERIES_PRODUCT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SERIES_SUM’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SERIES_LIMIT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SERIES_TENDSTO’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_ALGEBRA_GCD’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_ALGEBRA_CONJUGATE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_ALGEBRA_ARG’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_ALGEBRA_REAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_ALGEBRA_IMAGINARY’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_ALGEBRA_LCM’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_RELATIONS_EQUIVALENT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_RELATIONS_APPROX’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_RELATIONS_FACTOROF’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CALCULUS_INT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CALCULUS_DIFF’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CALCULUS_PARTIALDIFF’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CALCULUS_LOWLIMIT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CALCULUS_UPLIMIT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CALCULUS_DIVERGENCE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CALCULUS_GRAD’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CALCULUS_CURL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CALCULUS_LAPLACIAN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SET_THEORY_SET’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SET_THEORY_LIST’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SET_THEORY_UNION’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SET_THEORY_INTERSECT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SET_THEORY_IN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SET_THEORY_NOTIN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SET_THEORY_SUBSET’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SET_THEORY_PRSUBSET’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SET_THEORY_NOTSUBSET’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SET_THEORY_NOTPRSUBSET’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SET_THEORY_SETDIFF’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SET_THEORY_CARD’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_SET_THEORY_CARTESIANPRODUCT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CONSTANT_IMAGINARYI’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CONSTANTS_INTEGERS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CONSTANTS_REALS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CONSTANTS_RATIONALS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CONSTANTS_NATURALNUMBERS’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CONSTANTS_COMPLEXES’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CONSTANTS_PRIMES’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CONSTANTS_EMPTYSET’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_CONSTANTS_EULERGAMMA’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_BASIC_CONTENT_INTERVAL’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_BASIC_CONTENT_INVERSE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_BASIC_CONTENT_CONDITION’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_BASIC_CONTENT_DECLARE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_BASIC_CONTENT_COMPOSE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_BASIC_CONTENT_IDENT’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_BASIC_CONTENT_DOMAIN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_BASIC_CONTENT_CODOMAIN’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_BASIC_CONTENT_IMAGE’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_BASIC_CONTENT_DOMAINOFAPPLICATION’ not handled in switch [-Wswitch] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.cpp:3749:14: warning: enumeration value ‘AST_UNKNOWN’ not handled in switch [-Wswitch] [ 57%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/DefinitionURLRegistry.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/math/DefinitionURLRegistry.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/math/DefinitionURLRegistry.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/math/DefinitionURLRegistry.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/DefinitionURLRegistry.cpp /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/DefinitionURLRegistry.cpp: In static member function ‘static int DefinitionURLRegistry::addDefinitionURL(const std::string&, int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/DefinitionURLRegistry.cpp:82:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 82 | if (getNumDefinitionURLs() == n + 1) | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/DefinitionURLRegistry.cpp: In static member function ‘static std::string DefinitionURLRegistry::getDefinitionUrlByIndex(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/DefinitionURLRegistry.cpp:106:11: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 106 | if (i == index) | ~~^~~~~~~~ [ 57%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/FormulaFormatter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/math/FormulaFormatter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/math/FormulaFormatter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/math/FormulaFormatter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 57%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/FormulaParser.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/math/FormulaParser.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/math/FormulaParser.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/math/FormulaParser.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 57%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/FormulaTokenizer.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/math/FormulaTokenizer.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/math/FormulaTokenizer.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/math/FormulaTokenizer.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaTokenizer.cpp [ 58%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/L3FormulaFormatter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/math/L3FormulaFormatter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/math/L3FormulaFormatter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/math/L3FormulaFormatter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/L3FormulaFormatter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/L3FormulaFormatter.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 58%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/L3Parser.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/math/L3Parser.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/math/L3Parser.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/math/L3Parser.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/L3Parser.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from L3Parser.ypp:86: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 58%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/L3ParserSettings.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/math/L3ParserSettings.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/math/L3ParserSettings.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/math/L3ParserSettings.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/L3ParserSettings.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/L3ParserSettings.h:442, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/L3ParserSettings.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 58%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/MathML.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/math/MathML.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/math/MathML.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/math/MathML.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/MathML.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/MathML.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/MathML.cpp: In function ‘bool isValidCSymbol(SBMLNamespaces*, ASTNodeType_t)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/MathML.cpp:404:18: warning: unused variable ‘version’ [-Wunused-variable] 404 | unsigned int version = sbmlns->getVersion(); | ^~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/MathML.cpp: In function ‘void setTypeCI(ASTNode&, const XMLToken&, XMLInputStream&)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/MathML.cpp:424:16: warning: unused variable ‘n’ [-Wunused-variable] 424 | unsigned int n = DefinitionURLRegistry::getInstance().getNumDefinitionURLs(); | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/MathML.cpp: In function ‘ASTNode* readMathML(XMLInputStream&, std::string, bool)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/MathML.cpp:2177:21: warning: unused variable ‘name’ [-Wunused-variable] 2177 | const string& name = element1.getName(); | ^~~~ [ 58%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/units/FormulaUnitsData.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/units/FormulaUnitsData.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/units/FormulaUnitsData.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/units/FormulaUnitsData.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 58%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/units/UnitFormulaFormatter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/units/UnitFormulaFormatter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/units/UnitFormulaFormatter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/units/UnitFormulaFormatter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 58%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/units/UnitKindList.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/units/UnitKindList.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/units/UnitKindList.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/units/UnitKindList.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitKindList.cpp [ 58%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/CallbackRegistry.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/util/CallbackRegistry.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/util/CallbackRegistry.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/util/CallbackRegistry.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/CallbackRegistry.cpp [ 58%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/ElementFilter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/util/ElementFilter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/util/ElementFilter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/util/ElementFilter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/ElementFilter.cpp [ 58%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/IdFilter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/util/IdFilter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/util/IdFilter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/util/IdFilter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/IdFilter.cpp [ 58%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/IdList.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml 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-D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/util/IdList.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/util/IdList.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/util/IdList.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/IdList.cpp [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/IdentifierTransformer.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common 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src/CMakeFiles/sbml-static.dir/sbml/util/IdentifierTransformer.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/util/IdentifierTransformer.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/util/IdentifierTransformer.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/IdentifierTransformer.cpp [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/List.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common 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src/CMakeFiles/sbml-static.dir/sbml/util/List.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/util/List.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/util/List.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/List.cpp [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/MathFilter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension 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CMakeFiles/sbml-static.dir/sbml/util/MetaIdFilter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/util/MetaIdFilter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/MetaIdFilter.cpp [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/PrefixTransformer.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension 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CMakeFiles/sbml-static.dir/sbml/util/PrefixTransformer.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/util/PrefixTransformer.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/PrefixTransformer.cpp [ 59%] Building C object src/CMakeFiles/sbml-static.dir/sbml/util/Stack.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension 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CMakeFiles/sbml-static.dir/sbml/util/StringBuffer.c.o.d -o CMakeFiles/sbml-static.dir/sbml/util/StringBuffer.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/StringBuffer.c [ 59%] Building C object src/CMakeFiles/sbml-static.dir/sbml/util/memory.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension 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CMakeFiles/sbml-static.dir/sbml/util/memory.c.o.d -o CMakeFiles/sbml-static.dir/sbml/util/memory.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/memory.c [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/util.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/util/util.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/util/util.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/util/util.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/util.cpp [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/ConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/ConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/ConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/ConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/ConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/ConsistencyValidator.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/IdentifierConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/IdentifierConsistencyValidator.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/InternalConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/InternalConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/InternalConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/InternalConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/InternalConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/InternalConsistencyValidator.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L1CompatibilityValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/L1CompatibilityValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/L1CompatibilityValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/L1CompatibilityValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L1CompatibilityValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/L1CompatibilityConstraints.cpp:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L1CompatibilityValidator.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L2v1CompatibilityValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/L2v1CompatibilityValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/L2v1CompatibilityValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/L2v1CompatibilityValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L2v1CompatibilityValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/L2v1CompatibilityConstraints.cpp:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L2v1CompatibilityValidator.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L2v2CompatibilityValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/L2v2CompatibilityValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/L2v2CompatibilityValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/L2v2CompatibilityValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L2v2CompatibilityValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/L2v2CompatibilityConstraints.cpp:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L2v2CompatibilityValidator.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L2v3CompatibilityValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/L2v3CompatibilityValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/L2v3CompatibilityValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/L2v3CompatibilityValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L2v3CompatibilityValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/L2v3CompatibilityConstraints.cpp:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L2v3CompatibilityValidator.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L2v4CompatibilityValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/L2v4CompatibilityValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/L2v4CompatibilityValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/L2v4CompatibilityValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L2v4CompatibilityValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/L2v4CompatibilityConstraints.cpp:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L2v4CompatibilityValidator.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L3v1CompatibilityValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/L3v1CompatibilityValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/L3v1CompatibilityValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/L3v1CompatibilityValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L3v1CompatibilityValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/L3v1CompatibilityConstraints.cpp:47, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L3v1CompatibilityValidator.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L3v2CompatibilityValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/L3v2CompatibilityValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/L3v2CompatibilityValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/L3v2CompatibilityValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L3v2CompatibilityValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/L3v2CompatibilityConstraints.cpp:47, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/L3v2CompatibilityValidator.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/MathMLConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/MathMLConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/MathMLConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/MathMLConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/MathMLConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/MathMLConsistencyValidator.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/ModelingPracticeValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/ModelingPracticeValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/ModelingPracticeValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/ModelingPracticeValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/ModelingPracticeValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/ModelingPracticeValidator.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/OverdeterminedValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/OverdeterminedValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/OverdeterminedValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/OverdeterminedValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/OverdeterminedValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/OverdeterminedValidator.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/SBMLExternalValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/SBMLExternalValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/SBMLExternalValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/SBMLExternalValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBMLExternalValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBMLValidator.h:84, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBMLExternalValidator.h:52, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBMLExternalValidator.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/SBMLInternalValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/SBMLInternalValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/SBMLInternalValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/SBMLInternalValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBMLInternalValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBMLValidator.h:84, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBMLInternalValidator.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBMLInternalValidator.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/SBMLValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/SBMLValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/SBMLValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/SBMLValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBMLValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBMLValidator.h:84, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBMLValidator.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/SBOConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/SBOConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/SBOConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/SBOConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBOConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/SBOConsistencyValidator.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/StrictUnitConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/StrictUnitConsistencyValidator.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/UnitConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/UnitConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/UnitConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/UnitConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/UnitConsistencyValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/UnitConsistencyValidator.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/VConstraint.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/VConstraint.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/VConstraint.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/VConstraint.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/Validator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/Validator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/Validator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/Validator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/Validator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/Validator.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ArgumentsUnitsCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ArgumentsUnitsCheck.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/ArgumentsUnitsCheck.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ArgumentsUnitsCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/ArgumentsUnitsCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/ArgumentsUnitsCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/AssignmentCycles.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/AssignmentCycles.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/AssignmentCycles.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/AssignmentCycles.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/AssignmentCycles.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/AssignmentCycles.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/AssignmentRuleOrdering.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/AssignmentRuleOrdering.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementMathCheck.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementMathCheck.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/CiElementMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/CiElementMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementNot0DComp.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementNot0DComp.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementNot0DComp.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementNot0DComp.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/CiElementNot0DComp.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/CiElementNot0DComp.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/CompartmentOutsideCycles.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/CompartmentOutsideCycles.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/CompartmentOutsideCycles.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/CompartmentOutsideCycles.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/CompartmentOutsideCycles.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/CompartmentOutsideCycles.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/EqualityArgsMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/EqualityArgsMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ExponentUnitsCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ExponentUnitsCheck.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/ExponentUnitsCheck.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ExponentUnitsCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/ExponentUnitsCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/ExponentUnitsCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionApplyMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionApplyMathCheck.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionApplyMathCheck.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionApplyMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/FunctionApplyMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/FunctionApplyMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionDefinitionRecursion.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionDefinitionRecursion.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionDefinitionRecursion.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionDefinitionRecursion.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/FunctionDefinitionRecursion.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/FunctionDefinitionRecursion.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionDefinitionVars.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionDefinitionVars.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionDefinitionVars.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionDefinitionVars.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/FunctionDefinitionVars.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/FunctionDefinitionVars.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionReferredToExists.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionReferredToExists.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionReferredToExists.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionReferredToExists.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/FunctionReferredToExists.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/FunctionReferredToExists.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdBase.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdBase.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/IdBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/IdBase.h:52, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/IdBase.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/IdNameNewOnSBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/IdNameNewOnSBase.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 63%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/KineticLawUnitsCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/KineticLawUnitsCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 63%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawVars.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawVars.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawVars.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawVars.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/KineticLawVars.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/KineticLawVars.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 63%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/LambdaMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/LambdaMathCheck.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/LambdaMathCheck.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/LambdaMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/LambdaMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/LambdaMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 63%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/LocalParameterMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/LocalParameterMathCheck.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/LocalParameterMathCheck.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/LocalParameterMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/LocalParameterMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/LocalParameterMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 63%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 63%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/LogicalArgsMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/LogicalArgsMathCheck.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/LogicalArgsMathCheck.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/LogicalArgsMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/LogicalArgsMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/LogicalArgsMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 63%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/MathMLBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/MathMLBase.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/MathMLBase.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/MathMLBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/MathMLBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/MathMLBase.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 63%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/ModelUnitsDangling.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/ModelUnitsDangling.h:55, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/ModelUnitsDangling.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 63%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/NumberArgsMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/NumberArgsMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 63%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumericArgsMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumericArgsMathCheck.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumericArgsMathCheck.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumericArgsMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/NumericArgsMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/NumericArgsMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 63%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/NumericReturnMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/NumericReturnMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 63%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/OverDeterminedCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/OverDeterminedCheck.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/OverDeterminedCheck.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/OverDeterminedCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/OverDeterminedCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/OverDeterminedCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/PieceBooleanMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/PieceBooleanMathCheck.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/PieceBooleanMathCheck.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/PieceBooleanMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/PieceBooleanMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/PieceBooleanMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/PiecewiseValueMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/PiecewiseValueMathCheck.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/PiecewiseValueMathCheck.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/PiecewiseValueMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/PiecewiseValueMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/PiecewiseValueMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/PowerUnitsCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/PowerUnitsCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCycles.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCycles.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCycles.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCycles.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/RateOfCycles.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/RateOfCycles.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ReportEmptyListOf.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ReportEmptyListOf.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/ReportEmptyListOf.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ReportEmptyListOf.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/ReportEmptyListOf.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/ReportEmptyListOf.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/SpeciesReactionOrRule.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/SpeciesReactionOrRule.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/StoichiometryMathVars.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/StoichiometryMathVars.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdBase.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdBase.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueIdBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/IdBase.h:52, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueIdBase.h:55, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueIdBase.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 65%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 65%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsInModel.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsInModel.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsInModel.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsInModel.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueIdsInModel.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueIdsInModel.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 65%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueMetaId.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueMetaId.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueMetaId.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueMetaId.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueMetaId.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/UnitFormulaFormatter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/VConstraint.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueMetaId.h:55, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueMetaId.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 65%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 65%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 65%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 65%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 65%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 65%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueVarsInRules.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UniqueVarsInRules.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 65%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UnitsBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UnitsBase.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/UnitsBase.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UnitsBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UnitsBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/UnitsBase.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 65%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common 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-D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/ValidCnUnitsValue.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/constraints/ValidCnUnitsValue.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 65%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/CompressCommon.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/compress/CompressCommon.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/compress/CompressCommon.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/compress/CompressCommon.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/CompressCommon.cpp [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/InputDecompressor.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension 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CMakeFiles/sbml-static.dir/sbml/compress/InputDecompressor.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/compress/InputDecompressor.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/InputDecompressor.cpp [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/OutputCompressor.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common 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src/CMakeFiles/sbml-static.dir/sbml/compress/OutputCompressor.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/compress/OutputCompressor.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/compress/OutputCompressor.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/OutputCompressor.cpp [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/bzfstream.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common 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src/CMakeFiles/sbml-static.dir/sbml/compress/bzfstream.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/compress/bzfstream.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/compress/bzfstream.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/bzfstream.cpp [ 66%] Building C object src/CMakeFiles/sbml-static.dir/sbml/compress/zip.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/compress/zip.c.o -MF CMakeFiles/sbml-static.dir/sbml/compress/zip.c.o.d -o CMakeFiles/sbml-static.dir/sbml/compress/zip.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/zip.c [ 66%] Building C object src/CMakeFiles/sbml-static.dir/sbml/compress/unzip.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/compress/unzip.c.o -MF CMakeFiles/sbml-static.dir/sbml/compress/unzip.c.o.d -o CMakeFiles/sbml-static.dir/sbml/compress/unzip.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/unzip.c [ 66%] Building C object src/CMakeFiles/sbml-static.dir/sbml/compress/ioapi.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/compress/ioapi.c.o -MF CMakeFiles/sbml-static.dir/sbml/compress/ioapi.c.o.d -o CMakeFiles/sbml-static.dir/sbml/compress/ioapi.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi.c [ 66%] Building C object src/CMakeFiles/sbml-static.dir/sbml/compress/ioapi_mem.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/compress/ioapi_mem.c.o -MF CMakeFiles/sbml-static.dir/sbml/compress/ioapi_mem.c.o.d -o CMakeFiles/sbml-static.dir/sbml/compress/ioapi_mem.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c: In function ‘fopen_mem_func’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c:35:18: warning: old-style function definition [-Wold-style-definition] 35 | voidpf ZCALLBACK fopen_mem_func (opaque, filename, mode) | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c: In function ‘fopendisk_mem_func’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c:62:18: warning: old-style function definition [-Wold-style-definition] 62 | voidpf ZCALLBACK fopendisk_mem_func (opaque, stream, number_disk, mode) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c: In function ‘fread_mem_func’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c:72:17: warning: old-style function definition [-Wold-style-definition] 72 | uLong ZCALLBACK fread_mem_func (opaque, stream, buf, size) | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c: In function ‘fwrite_mem_func’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c:90:17: warning: old-style function definition [-Wold-style-definition] 90 | uLong ZCALLBACK fwrite_mem_func (opaque, stream, buf, size) | ^~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c: In function ‘ftell_mem_func’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c:126:16: warning: old-style function definition [-Wold-style-definition] 126 | long ZCALLBACK ftell_mem_func (opaque, stream) | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c: In function ‘fseek_mem_func’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c:134:16: warning: old-style function definition [-Wold-style-definition] 134 | long ZCALLBACK fseek_mem_func (opaque, stream, offset, origin) | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c: In function ‘fclose_mem_func’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c:163:15: warning: old-style function definition [-Wold-style-definition] 163 | int ZCALLBACK fclose_mem_func (opaque, stream) | ^~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c: In function ‘ferror_mem_func’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c:171:15: warning: old-style function definition [-Wold-style-definition] 171 | int ZCALLBACK ferror_mem_func (opaque, stream) | ^~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c: In function ‘fill_memory_filefunc’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/ioapi_mem.c:179:6: warning: old-style function definition [-Wold-style-definition] 179 | void fill_memory_filefunc (pzlib_filefunc_def, ourmem) | ^~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/zfstream.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/compress/zfstream.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/compress/zfstream.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/compress/zfstream.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/zfstream.cpp [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/zipfstream.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml 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-D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/compress/zipfstream.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/compress/zipfstream.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/compress/zipfstream.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/compress/zipfstream.cpp [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLAttributes.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml 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-D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/xml/XMLAttributes.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/xml/XMLAttributes.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/xml/XMLAttributes.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLAttributes.cpp [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLBuffer.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml 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-D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/xml/XMLBuffer.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/xml/XMLBuffer.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/xml/XMLBuffer.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLBuffer.cpp [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLConstructorException.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml 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src/CMakeFiles/sbml-static.dir/sbml/xml/XMLErrorLog.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/xml/XMLErrorLog.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/xml/XMLErrorLog.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.cpp [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLLogOverride.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common 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src/CMakeFiles/sbml-static.dir/sbml/xml/XMLLogOverride.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/xml/XMLLogOverride.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/xml/XMLLogOverride.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLLogOverride.cpp [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLFileBuffer.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common 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src/CMakeFiles/sbml-static.dir/sbml/xml/XMLHandler.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/xml/XMLHandler.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/xml/XMLHandler.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLHandler.cpp [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLInputStream.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common 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src/CMakeFiles/sbml-static.dir/sbml/xml/XMLInputStream.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/xml/XMLInputStream.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/xml/XMLInputStream.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLInputStream.cpp [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLMemoryBuffer.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common 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src/CMakeFiles/sbml-static.dir/sbml/xml/XMLMemoryBuffer.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/xml/XMLMemoryBuffer.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/xml/XMLMemoryBuffer.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLMemoryBuffer.cpp [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLNamespaces.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common 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src/CMakeFiles/sbml-static.dir/sbml/xml/XMLNamespaces.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/xml/XMLNamespaces.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/xml/XMLNamespaces.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLNamespaces.cpp [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLNode.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common 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src/CMakeFiles/sbml-static.dir/sbml/xml/XMLNode.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/xml/XMLNode.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/xml/XMLNode.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLNode.cpp [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLOutputStream.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/xml/XMLOutputStream.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/xml/XMLOutputStream.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/xml/XMLOutputStream.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLOutputStream.cpp /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLOutputStream.cpp: In member function ‘void XMLOutputStream::writeComment(const std::string&, const std::string&, bool)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLOutputStream.cpp:997:44: warning: ‘%02d’ directive output may be truncated writing between 2 and 11 bytes into a region of size between 5 and 15 [-Wformat-truncation=] 997 | snprintf(formattedDateAndTime, 17, "%d-%02d-%02d %02d:%02d", | ^~~~ In member function ‘void XMLOutputStream::writeComment(const std::string&, const std::string&, bool)’, inlined from ‘void XMLOutputStream::writeComment(const std::string&, const std::string&, bool)’ at /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLOutputStream.cpp:973:1: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLOutputStream.cpp:997:40: note: directive argument in the range [-2147483647, 2147483647] 997 | snprintf(formattedDateAndTime, 17, "%d-%02d-%02d %02d:%02d", | ^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:970, from /usr/include/c++/15/cstdio:47, from /usr/include/c++/15/ext/string_conversions.h:47, from /usr/include/c++/15/bits/basic_string.h:4444, from /usr/include/c++/15/string:56, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLOutputStream.cpp:44: In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘void XMLOutputStream::writeComment(const std::string&, const std::string&, bool)’ at /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLOutputStream.cpp:997:13, inlined from ‘void XMLOutputStream::writeComment(const std::string&, const std::string&, bool)’ at /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLOutputStream.cpp:973:1: /usr/include/riscv64-linux-gnu/bits/stdio2.h:68:35: note: ‘__builtin___snprintf_chk’ output between 14 and 60 bytes into a destination of size 17 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLParser.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/xml/XMLParser.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/xml/XMLParser.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/xml/XMLParser.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLParser.cpp [ 68%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLToken.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/xml/XMLToken.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/xml/XMLToken.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/xml/XMLToken.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLToken.cpp [ 68%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLTokenizer.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/xml/XMLTokenizer.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/xml/XMLTokenizer.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/xml/XMLTokenizer.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLTokenizer.cpp [ 68%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLTriple.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/xml/XMLTriple.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/xml/XMLTriple.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/xml/XMLTriple.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLTriple.cpp [ 68%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/LibXMLAttributes.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/xml/LibXMLHandler.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/xml/LibXMLHandler.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/xml/LibXMLHandler.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/LibXMLHandler.cpp [ 68%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/LibXMLNamespaces.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/xml/LibXMLNamespaces.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/xml/LibXMLNamespaces.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/xml/LibXMLNamespaces.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/LibXMLNamespaces.cpp [ 68%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/LibXMLParser.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/xml/LibXMLParser.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/xml/LibXMLParser.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/xml/LibXMLParser.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/LibXMLParser.cpp [ 68%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/LibXMLTranscode.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/CMakeFiles/sbml-static.dir/sbml/xml/LibXMLTranscode.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/xml/LibXMLTranscode.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/xml/LibXMLTranscode.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/LibXMLTranscode.cpp [ 68%] Linking CXX static library libsbml-static.a cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/cmake -P CMakeFiles/sbml-static.dir/cmake_clean_target.cmake cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/sbml-static.dir/link.txt --verbose=1 /usr/bin/ar qc libsbml-static.a 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"CMakeFiles/sbml-static.dir/sbml/xml/XMLHandler.cpp.o" "CMakeFiles/sbml-static.dir/sbml/xml/XMLInputStream.cpp.o" "CMakeFiles/sbml-static.dir/sbml/xml/XMLMemoryBuffer.cpp.o" "CMakeFiles/sbml-static.dir/sbml/xml/XMLNamespaces.cpp.o" "CMakeFiles/sbml-static.dir/sbml/xml/XMLNode.cpp.o" "CMakeFiles/sbml-static.dir/sbml/xml/XMLOutputStream.cpp.o" "CMakeFiles/sbml-static.dir/sbml/xml/XMLParser.cpp.o" "CMakeFiles/sbml-static.dir/sbml/xml/XMLToken.cpp.o" "CMakeFiles/sbml-static.dir/sbml/xml/XMLTokenizer.cpp.o" "CMakeFiles/sbml-static.dir/sbml/xml/XMLTriple.cpp.o" "CMakeFiles/sbml-static.dir/sbml/xml/LibXMLAttributes.cpp.o" "CMakeFiles/sbml-static.dir/sbml/xml/LibXMLHandler.cpp.o" "CMakeFiles/sbml-static.dir/sbml/xml/LibXMLNamespaces.cpp.o" "CMakeFiles/sbml-static.dir/sbml/xml/LibXMLParser.cpp.o" "CMakeFiles/sbml-static.dir/sbml/xml/LibXMLTranscode.cpp.o" /usr/bin/ranlib libsbml-static.a make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 68%] Built target sbml-static make -f src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/build.make src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/test /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/extension/test /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/DependInfo.cmake "--color=" test_comp_extensions make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/build.make src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 68%] Building CXX object src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/TestCheckConsistency.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/TestCheckConsistency.cpp.o -MF CMakeFiles/test_comp_extensions.dir/TestCheckConsistency.cpp.o.d -o CMakeFiles/test_comp_extensions.dir/TestCheckConsistency.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/test/TestCheckConsistency.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/test/TestCheckConsistency.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:72: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ModelDefinition.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:84: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 68%] Building CXX object src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/TestExtensionObjects.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/TestExtensionObjects.cpp.o -MF CMakeFiles/test_comp_extensions.dir/TestExtensionObjects.cpp.o.d -o CMakeFiles/test_comp_extensions.dir/TestExtensionObjects.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/test/TestExtensionObjects.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:41, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/test/TestExtensionObjects.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 68%] Building CXX object src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/TestMultipleNamespaces.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/TestMultipleNamespaces.cpp.o -MF CMakeFiles/test_comp_extensions.dir/TestMultipleNamespaces.cpp.o.d -o CMakeFiles/test_comp_extensions.dir/TestMultipleNamespaces.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/test/TestMultipleNamespaces.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:41, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/test/TestMultipleNamespaces.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/test/TestMultipleNamespaces.cpp:40: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:62: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:63: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:329:26: note: by ‘virtual GeneralGlyph& GeneralGlyph::operator=(const GeneralGlyph&)’ 329 | virtual GeneralGlyph& operator=(const GeneralGlyph& source); | ^~~~~~~~ [ 69%] Building CXX object src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/TestRunner.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/TestRunner.c.o -MF CMakeFiles/test_comp_extensions.dir/TestRunner.c.o.d -o CMakeFiles/test_comp_extensions.dir/TestRunner.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/test/TestRunner.c [ 69%] Linking CXX executable test_comp_extensions cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_comp_extensions.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test_comp_extensions.dir/link.d CMakeFiles/test_comp_extensions.dir/TestCheckConsistency.cpp.o CMakeFiles/test_comp_extensions.dir/TestExtensionObjects.cpp.o CMakeFiles/test_comp_extensions.dir/TestMultipleNamespaces.cpp.o CMakeFiles/test_comp_extensions.dir/TestRunner.c.o -o test_comp_extensions ../../../../../libsbml-static.a /usr/lib/riscv64-linux-gnu/libcheck.a /usr/lib/riscv64-linux-gnu/libbz2.so /usr/lib/riscv64-linux-gnu/libxml2.so /usr/lib/riscv64-linux-gnu/libz.so -lm -pthread -lrt -lsubunit make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 69%] Built target test_comp_extensions make -f src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/build.make src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/sbml/test /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/DependInfo.cmake "--color=" test_comp_sbase make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/build.make src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 69%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestAttributeNamespaces.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestAttributeNamespaces.cpp.o -MF CMakeFiles/test_comp_sbase.dir/TestAttributeNamespaces.cpp.o.d -o CMakeFiles/test_comp_sbase.dir/TestAttributeNamespaces.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestAttributeNamespaces.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestAttributeNamespaces.cpp:38: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestAttributeNamespaces.cpp: In function ‘void test_comp_AttributeNamespaces_model_extraCompAtt_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestAttributeNamespaces.cpp:1129:17: warning: unused variable ‘errors’ [-Wunused-variable] 1129 | SBMLErrorLog* errors = doc->getErrorLog(); | ^~~~~~ [ 69%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestReadWriteSBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestReadWriteSBase.cpp.o -MF CMakeFiles/test_comp_sbase.dir/TestReadWriteSBase.cpp.o.d -o CMakeFiles/test_comp_sbase.dir/TestReadWriteSBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestReadWriteSBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:41, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestReadWriteSBase.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 69%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestSBaseObjects.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestSBaseObjects.cpp.o -MF CMakeFiles/test_comp_sbase.dir/TestSBaseObjects.cpp.o.d -o CMakeFiles/test_comp_sbase.dir/TestSBaseObjects.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSBaseObjects.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:41, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSBaseObjects.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 69%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestDeletion.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestDeletion.c.o -MF CMakeFiles/test_comp_sbase.dir/TestDeletion.c.o.d -o CMakeFiles/test_comp_sbase.dir/TestDeletion.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestDeletion.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:116, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Deletion.h:104, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestDeletion.c:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:115: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestDeletion.c:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestDeletion.c: In function ‘void DeletionTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestDeletion.c:63:10: warning: too many arguments for format [-Wformat-extra-args] 63 | fail("Deletion_create(3, 1, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestDeletion.c: In function ‘void test_comp_deletion_id_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestDeletion.c:113:10: warning: too many arguments for format [-Wformat-extra-args] 113 | fail("Deletion_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestDeletion.c:123:10: warning: too many arguments for format [-Wformat-extra-args] 123 | fail("Deletion_unsetId(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestDeletion.c: In function ‘void test_comp_deletion_name_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestDeletion.c:144:10: warning: too many arguments for format [-Wformat-extra-args] 144 | fail("Deletion_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestDeletion.c:154:10: warning: too many arguments for format [-Wformat-extra-args] 154 | fail("Deletion_unsetName(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestDeletion.c: In function ‘void test_comp_deletion_metaid_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestDeletion.c:175:10: warning: too many arguments for format [-Wformat-extra-args] 175 | fail("SBase_setMetaId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestDeletion.c:184:10: warning: too many arguments for format [-Wformat-extra-args] 184 | fail("Deletion_unsetName(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 69%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestExternalModelDefinition.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestExternalModelDefinition.c.o -MF CMakeFiles/test_comp_sbase.dir/TestExternalModelDefinition.c.o.d -o CMakeFiles/test_comp_sbase.dir/TestExternalModelDefinition.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:121, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:120: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:122: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c: In function ‘void ExternalModelDefinitionTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c:63:10: warning: too many arguments for format [-Wformat-extra-args] 63 | fail("ExternalModelDefinition_create(3, 1, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c: In function ‘void test_comp_externalModelDefinition_id_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c:117:10: warning: too many arguments for format [-Wformat-extra-args] 117 | fail("ExternalModelDefinition_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c:127:10: warning: too many arguments for format [-Wformat-extra-args] 127 | fail("ExternalModelDefinition_unsetId(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c: In function ‘void test_comp_externalModelDefinition_name_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c:148:10: warning: too many arguments for format [-Wformat-extra-args] 148 | fail("ExternalModelDefinition_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c:158:10: warning: too many arguments for format [-Wformat-extra-args] 158 | fail("ExternalModelDefinition_unsetName(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c: In function ‘void test_comp_externalModelDefinition_modelRef_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c:179:10: warning: too many arguments for format [-Wformat-extra-args] 179 | fail("ExternalModelDefinition_setModelRef(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c:189:10: warning: too many arguments for format [-Wformat-extra-args] 189 | fail("ExternalModelDefinition_unsetModelRef(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c: In function ‘void test_comp_externalModelDefinition_source_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c:210:10: warning: too many arguments for format [-Wformat-extra-args] 210 | fail("ExternalModelDefinition_setSource(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c:220:10: warning: too many arguments for format [-Wformat-extra-args] 220 | fail("ExternalModelDefinition_unsetSource(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 69%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestModelDefinition.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestModelDefinition.c.o -MF CMakeFiles/test_comp_sbase.dir/TestModelDefinition.c.o.d -o CMakeFiles/test_comp_sbase.dir/TestModelDefinition.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestModelDefinition.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ModelDefinition.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestModelDefinition.c:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/FunctionDefinition.h:140, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:454: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ModelDefinition.h:65: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestModelDefinition.c:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestModelDefinition.c: In function ‘void ModelDefinitionTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestModelDefinition.c:63:10: warning: too many arguments for format [-Wformat-extra-args] 63 | fail("ModelDefinition_create(3, 1, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestModelDefinition.c: In function ‘void test_comp_modelDefinition_id_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestModelDefinition.c:108:10: warning: too many arguments for format [-Wformat-extra-args] 108 | fail("Model_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestModelDefinition.c:117:10: warning: too many arguments for format [-Wformat-extra-args] 117 | fail("Model_unsetId(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestModelDefinition.c: In function ‘void test_comp_modelDefinition_name_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestModelDefinition.c:138:10: warning: too many arguments for format [-Wformat-extra-args] 138 | fail("Model_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestModelDefinition.c:147:10: warning: too many arguments for format [-Wformat-extra-args] 147 | fail("Model_unsetName(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 69%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestPort.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestPort.c.o -MF CMakeFiles/test_comp_sbase.dir/TestPort.c.o.d -o CMakeFiles/test_comp_sbase.dir/TestPort.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestPort.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Port.h:84, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestPort.c:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Port.h:83: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Port.h:85: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestPort.c:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestPort.c: In function ‘void PortTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestPort.c:63:10: warning: too many arguments for format [-Wformat-extra-args] 63 | fail("Port_create(3, 1, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestPort.c: In function ‘void test_comp_port_id_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestPort.c:113:10: warning: too many arguments for format [-Wformat-extra-args] 113 | fail("Port_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestPort.c:123:10: warning: too many arguments for format [-Wformat-extra-args] 123 | fail("Port_unsetId(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestPort.c: In function ‘void test_comp_port_name_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestPort.c:144:10: warning: too many arguments for format [-Wformat-extra-args] 144 | fail("Port_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestPort.c:154:10: warning: too many arguments for format [-Wformat-extra-args] 154 | fail("Port_unsetName(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 69%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestReplacedBy.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestReplacedBy.c.o -MF CMakeFiles/test_comp_sbase.dir/TestReplacedBy.c.o.d -o CMakeFiles/test_comp_sbase.dir/TestReplacedBy.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestReplacedBy.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedBy.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestReplacedBy.c:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedBy.h:62: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedBy.h:65: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestReplacedBy.c:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestReplacedBy.c: In function ‘void ReplacedByTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestReplacedBy.c:63:10: warning: too many arguments for format [-Wformat-extra-args] 63 | fail("ReplacedBy_create(3, 1, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestReplacedBy.c: In function ‘void test_comp_replacedBy_submodelRef_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestReplacedBy.c:111:10: warning: too many arguments for format [-Wformat-extra-args] 111 | fail("ReplacedBy_setSubmodelRef(...) submodelRef not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestReplacedBy.c:121:10: warning: too many arguments for format [-Wformat-extra-args] 121 | fail("ReplacedBy_unsetSubmodelRef(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 69%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestReplacedElement.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestReplacedElement.c.o -MF CMakeFiles/test_comp_sbase.dir/TestReplacedElement.c.o.d -o CMakeFiles/test_comp_sbase.dir/TestReplacedElement.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestReplacedElement.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:136, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestReplacedElement.c:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:134: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestReplacedElement.c:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestReplacedElement.c: In function ‘void ReplacedElementTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestReplacedElement.c:63:10: warning: too many arguments for format [-Wformat-extra-args] 63 | fail("ReplacedElement_create(3, 1, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestReplacedElement.c: In function ‘void test_comp_replacedElement_submodelRef_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestReplacedElement.c:115:10: warning: too many arguments for format [-Wformat-extra-args] 115 | fail("ReplacedElement_setSubmodelRef(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestReplacedElement.c:125:10: warning: too many arguments for format [-Wformat-extra-args] 125 | fail("ReplacedElement_unsetSubmodelRef(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestReplacedElement.c: In function ‘void test_comp_replacedElement_deletion_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestReplacedElement.c:146:10: warning: too many arguments for format [-Wformat-extra-args] 146 | fail("ReplacedElement_setDeletion(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestReplacedElement.c:156:10: warning: too many arguments for format [-Wformat-extra-args] 156 | fail("ReplacedElement_unsetDeletion(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestReplacedElement.c: In function ‘void test_comp_replacedElement_conversionFactor_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestReplacedElement.c:177:10: warning: too many arguments for format [-Wformat-extra-args] 177 | fail("ReplacedElement_setConversionFactor(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestReplacedElement.c:187:10: warning: too many arguments for format [-Wformat-extra-args] 187 | fail("ReplacedElement_unsetConversionFactor(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 69%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestRunner.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestRunner.c.o -MF CMakeFiles/test_comp_sbase.dir/TestRunner.c.o.d -o CMakeFiles/test_comp_sbase.dir/TestRunner.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestRunner.c [ 70%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestSBaseRef.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestSBaseRef.c.o -MF CMakeFiles/test_comp_sbase.dir/TestSBaseRef.c.o.d -o CMakeFiles/test_comp_sbase.dir/TestSBaseRef.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSBaseRef.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:116, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSBaseRef.c:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:115: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSBaseRef.c:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSBaseRef.c: In function ‘void SBaseRefTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSBaseRef.c:63:10: warning: too many arguments for format [-Wformat-extra-args] 63 | fail("SBaseRef_create(3, 1, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSBaseRef.c: In function ‘void test_comp_sBaseRef_idRef_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSBaseRef.c:119:10: warning: too many arguments for format [-Wformat-extra-args] 119 | fail("SBaseRef_setIdRef(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSBaseRef.c:129:10: warning: too many arguments for format [-Wformat-extra-args] 129 | fail("SBaseRef_unsetIdRef(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSBaseRef.c: In function ‘void test_comp_sBaseRef_unitRef_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSBaseRef.c:150:10: warning: too many arguments for format [-Wformat-extra-args] 150 | fail("SBaseRef_setUnitRef(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSBaseRef.c:160:10: warning: too many arguments for format [-Wformat-extra-args] 160 | fail("SBaseRef_unsetUnitRef(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSBaseRef.c: In function ‘void test_comp_sBaseRef_metaIdRef_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSBaseRef.c:181:10: warning: too many arguments for format [-Wformat-extra-args] 181 | fail("SBaseRef_setMetaIdRef(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSBaseRef.c:191:10: warning: too many arguments for format [-Wformat-extra-args] 191 | fail("SBaseRef_unsetMetaIdRef(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSBaseRef.c: In function ‘void test_comp_sBaseRef_portRef_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSBaseRef.c:212:10: warning: too many arguments for format [-Wformat-extra-args] 212 | fail("SBaseRef_setPortRef(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSBaseRef.c:222:10: warning: too many arguments for format [-Wformat-extra-args] 222 | fail("SBaseRef_unsetPortRef(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSBaseRef.c: In function ‘void test_comp_sBaseRef_sBaseRef_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSBaseRef.c:242:10: warning: too many arguments for format [-Wformat-extra-args] 242 | fail("SBaseRef_setSBaseRef(...) did not make a copy of the SBaseRef_t."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSBaseRef.c:251:10: warning: too many arguments for format [-Wformat-extra-args] 251 | fail("SBaseRef_unsetSBaseRef(P) did not clear the SBaseRef_t."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 70%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestSubmodel.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestSubmodel.c.o -MF CMakeFiles/test_comp_sbase.dir/TestSubmodel.c.o.d -o CMakeFiles/test_comp_sbase.dir/TestSubmodel.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSubmodel.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSubmodel.c:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:116: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:118: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSubmodel.c:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSubmodel.c: In function ‘void SubmodelTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSubmodel.c:65:10: warning: too many arguments for format [-Wformat-extra-args] 65 | fail("Submodel_create(3, 1, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSubmodel.c: In function ‘void test_comp_submodel_id_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSubmodel.c:125:10: warning: too many arguments for format [-Wformat-extra-args] 125 | fail("Submodel_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSubmodel.c:135:10: warning: too many arguments for format [-Wformat-extra-args] 135 | fail("Submodel_unsetId(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSubmodel.c: In function ‘void test_comp_submodel_name_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSubmodel.c:156:10: warning: too many arguments for format [-Wformat-extra-args] 156 | fail("Submodel_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSubmodel.c:166:10: warning: too many arguments for format [-Wformat-extra-args] 166 | fail("Submodel_unsetName(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSubmodel.c: In function ‘void test_comp_submodel_modelRef_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSubmodel.c:187:10: warning: too many arguments for format [-Wformat-extra-args] 187 | fail("Submodel_setModelRef(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSubmodel.c:197:10: warning: too many arguments for format [-Wformat-extra-args] 197 | fail("Submodel_unsetModelRef(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSubmodel.c: In function ‘void test_comp_submodel_timeConversionFactor_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSubmodel.c:235:10: warning: too many arguments for format [-Wformat-extra-args] 235 | fail("Submodel_setTimeConversionFactor(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSubmodel.c:245:10: warning: too many arguments for format [-Wformat-extra-args] 245 | fail("Submodel_unsetTimeConversionFactor(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSubmodel.c: In function ‘void test_comp_submodel_extentConversionFactor_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSubmodel.c:266:10: warning: too many arguments for format [-Wformat-extra-args] 266 | fail("Submodel_setExtentConversionFactor(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSubmodel.c:276:10: warning: too many arguments for format [-Wformat-extra-args] 276 | fail("Submodel_unsetExtentConversionFactor(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSubmodel.c: In function ‘void test_comp_submodel_deletion_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/test/TestSubmodel.c:299:10: warning: too many arguments for format [-Wformat-extra-args] 299 | fail("Submodel_addDeletion(...) did not make a copy of the deletion."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 70%] Linking CXX executable test_comp_sbase cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/sbml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_comp_sbase.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test_comp_sbase.dir/link.d CMakeFiles/test_comp_sbase.dir/TestAttributeNamespaces.cpp.o CMakeFiles/test_comp_sbase.dir/TestReadWriteSBase.cpp.o CMakeFiles/test_comp_sbase.dir/TestSBaseObjects.cpp.o CMakeFiles/test_comp_sbase.dir/TestDeletion.c.o CMakeFiles/test_comp_sbase.dir/TestExternalModelDefinition.c.o CMakeFiles/test_comp_sbase.dir/TestModelDefinition.c.o CMakeFiles/test_comp_sbase.dir/TestPort.c.o CMakeFiles/test_comp_sbase.dir/TestReplacedBy.c.o CMakeFiles/test_comp_sbase.dir/TestReplacedElement.c.o CMakeFiles/test_comp_sbase.dir/TestRunner.c.o CMakeFiles/test_comp_sbase.dir/TestSBaseRef.c.o CMakeFiles/test_comp_sbase.dir/TestSubmodel.c.o -o test_comp_sbase ../../../../../libsbml-static.a /usr/lib/riscv64-linux-gnu/libcheck.a /usr/lib/riscv64-linux-gnu/libbz2.so /usr/lib/riscv64-linux-gnu/libxml2.so /usr/lib/riscv64-linux-gnu/libz.so -lm -pthread -lrt -lsubunit make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 70%] Built target test_comp_sbase make -f src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/build.make src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/test /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/util/test /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/DependInfo.cmake "--color=" test_comp_util make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/build.make src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 70%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningConverter.cpp.o -MF CMakeFiles/test_comp_util.dir/TestCompFlatteningConverter.cpp.o.d -o CMakeFiles/test_comp_util.dir/TestCompFlatteningConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/test/TestCompFlatteningConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:41, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/test/TestCompFlatteningConverter.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 70%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningConverterStripPackage.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningConverterStripPackage.cpp.o -MF CMakeFiles/test_comp_util.dir/TestCompFlatteningConverterStripPackage.cpp.o.d -o CMakeFiles/test_comp_util.dir/TestCompFlatteningConverterStripPackage.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/test/TestCompFlatteningConverterStripPackage.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:41, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/test/TestCompFlatteningConverterStripPackage.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 70%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningErrorMessages.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningErrorMessages.cpp.o -MF CMakeFiles/test_comp_util.dir/TestCompFlatteningErrorMessages.cpp.o.d -o CMakeFiles/test_comp_util.dir/TestCompFlatteningErrorMessages.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/test/TestCompFlatteningErrorMessages.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:41, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/test/TestCompFlatteningErrorMessages.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 70%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningNewFlags.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningNewFlags.cpp.o -MF CMakeFiles/test_comp_util.dir/TestCompFlatteningNewFlags.cpp.o.d -o CMakeFiles/test_comp_util.dir/TestCompFlatteningNewFlags.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/test/TestCompFlatteningNewFlags.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:41, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/test/TestCompFlatteningNewFlags.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 70%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningUnknownPackageRefs.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningUnknownPackageRefs.cpp.o -MF CMakeFiles/test_comp_util.dir/TestCompFlatteningUnknownPackageRefs.cpp.o.d -o CMakeFiles/test_comp_util.dir/TestCompFlatteningUnknownPackageRefs.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/test/TestCompFlatteningUnknownPackageRefs.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:41, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/test/TestCompFlatteningUnknownPackageRefs.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 70%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompLevelVersionConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompLevelVersionConverter.cpp.o -MF CMakeFiles/test_comp_util.dir/TestCompLevelVersionConverter.cpp.o.d -o CMakeFiles/test_comp_util.dir/TestCompLevelVersionConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/test/TestCompLevelVersionConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:41, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/test/TestCompLevelVersionConverter.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 70%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestExternalModelResolving.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestExternalModelResolving.cpp.o -MF CMakeFiles/test_comp_util.dir/TestExternalModelResolving.cpp.o.d -o CMakeFiles/test_comp_util.dir/TestExternalModelResolving.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/test/TestExternalModelResolving.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/test/TestExternalModelResolving.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:72: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ModelDefinition.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:84: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 70%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestURIResolvers.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestURIResolvers.cpp.o -MF CMakeFiles/test_comp_util.dir/TestURIResolvers.cpp.o.d -o CMakeFiles/test_comp_util.dir/TestURIResolvers.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/test/TestURIResolvers.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/test/TestURIResolvers.cpp:38: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 71%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestRunner.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestRunner.c.o -MF CMakeFiles/test_comp_util.dir/TestRunner.c.o.d -o CMakeFiles/test_comp_util.dir/TestRunner.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util/test/TestRunner.c [ 71%] Linking CXX executable test_comp_util cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/util/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_comp_util.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test_comp_util.dir/link.d CMakeFiles/test_comp_util.dir/TestCompFlatteningConverter.cpp.o CMakeFiles/test_comp_util.dir/TestCompFlatteningConverterStripPackage.cpp.o CMakeFiles/test_comp_util.dir/TestCompFlatteningErrorMessages.cpp.o CMakeFiles/test_comp_util.dir/TestCompFlatteningNewFlags.cpp.o CMakeFiles/test_comp_util.dir/TestCompFlatteningUnknownPackageRefs.cpp.o CMakeFiles/test_comp_util.dir/TestCompLevelVersionConverter.cpp.o CMakeFiles/test_comp_util.dir/TestExternalModelResolving.cpp.o CMakeFiles/test_comp_util.dir/TestURIResolvers.cpp.o CMakeFiles/test_comp_util.dir/TestRunner.c.o -o test_comp_util ../../../../../libsbml-static.a /usr/lib/riscv64-linux-gnu/libcheck.a /usr/lib/riscv64-linux-gnu/libbz2.so /usr/lib/riscv64-linux-gnu/libxml2.so /usr/lib/riscv64-linux-gnu/libz.so -lm -pthread -lrt -lsubunit make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 71%] Built target test_comp_util make -f src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/build.make src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/test /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/validator/test /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/DependInfo.cmake "--color=" test_comp_validator make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/build.make src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 71%] Building CXX object src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/TestCompConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/TestCompConsistencyValidator.cpp.o -MF CMakeFiles/test_comp_validator.dir/TestCompConsistencyValidator.cpp.o.d -o CMakeFiles/test_comp_validator.dir/TestCompConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/test/TestCompConsistencyValidator.cpp [ 71%] Building CXX object src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/TestFile.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/TestFile.cpp.o -MF CMakeFiles/test_comp_validator.dir/TestFile.cpp.o.d -o CMakeFiles/test_comp_validator.dir/TestFile.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/test/TestFile.cpp [ 71%] Building CXX object src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/TestValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/TestValidator.cpp.o -MF CMakeFiles/test_comp_validator.dir/TestValidator.cpp.o.d -o CMakeFiles/test_comp_validator.dir/TestValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/test/TestValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/test/TestValidator.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 71%] Linking CXX executable test_comp_validator cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/comp/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_comp_validator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test_comp_validator.dir/link.d CMakeFiles/test_comp_validator.dir/TestCompConsistencyValidator.cpp.o CMakeFiles/test_comp_validator.dir/TestFile.cpp.o CMakeFiles/test_comp_validator.dir/TestValidator.cpp.o -o test_comp_validator ../../../../../libsbml-static.a /usr/lib/riscv64-linux-gnu/libcheck.a /usr/lib/riscv64-linux-gnu/libbz2.so /usr/lib/riscv64-linux-gnu/libxml2.so /usr/lib/riscv64-linux-gnu/libz.so -lm -pthread -lrt -lsubunit make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 71%] Built target test_comp_validator make -f src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/build.make src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/test /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/fbc/extension/test /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/DependInfo.cmake "--color=" test_sbml_package_fbc make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/build.make src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 71%] Building CXX object src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestFbcAssociation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/fbc/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestFbcAssociation.cpp.o -MF CMakeFiles/test_sbml_package_fbc.dir/TestFbcAssociation.cpp.o.d -o CMakeFiles/test_sbml_package_fbc.dir/TestFbcAssociation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/test/TestFbcAssociation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcModelPlugin.h:146, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/test/TestFbcAssociation.cpp:14: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/test/TestFbcAssociation.cpp:13: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/test/TestFbcAssociation.cpp: In function ‘void FbcAssociationTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/test/TestFbcAssociation.cpp:60:10: warning: too many arguments for format [-Wformat-extra-args] 60 | fail("Failed to create a FbcAssociation object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 71%] Building CXX object src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestFbcExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/fbc/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestFbcExtension.cpp.o -MF CMakeFiles/test_sbml_package_fbc.dir/TestFbcExtension.cpp.o.d -o CMakeFiles/test_sbml_package_fbc.dir/TestFbcExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/test/TestFbcExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/test/TestFbcExtension.cpp:15: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/test/TestFbcExtension.cpp:13: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/test/TestFbcExtension.cpp: In function ‘void FbcExtensionTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/test/TestFbcExtension.cpp:53:10: warning: too many arguments for format [-Wformat-extra-args] 53 | fail("Failed to create a FbcExtension object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 71%] Building CXX object src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestReadFbcExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/fbc/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestReadFbcExtension.cpp.o -MF CMakeFiles/test_sbml_package_fbc.dir/TestReadFbcExtension.cpp.o.d -o CMakeFiles/test_sbml_package_fbc.dir/TestReadFbcExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/test/TestReadFbcExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/test/TestReadFbcExtension.cpp:14: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 71%] Building CXX object src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestWriteFbcExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/fbc/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestWriteFbcExtension.cpp.o -MF CMakeFiles/test_sbml_package_fbc.dir/TestWriteFbcExtension.cpp.o.d -o CMakeFiles/test_sbml_package_fbc.dir/TestWriteFbcExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/test/TestWriteFbcExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/test/TestWriteFbcExtension.cpp:11: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/test/TestWriteFbcExtension.cpp:10: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/test/TestWriteFbcExtension.cpp: In function ‘void WriteFbcExtensionTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/test/TestWriteFbcExtension.cpp:46:10: warning: too many arguments for format [-Wformat-extra-args] 46 | fail("Failed to create a FbcExtension object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 71%] Building CXX object src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestRunner.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/fbc/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestRunner.c.o -MF CMakeFiles/test_sbml_package_fbc.dir/TestRunner.c.o.d -o CMakeFiles/test_sbml_package_fbc.dir/TestRunner.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension/test/TestRunner.c [ 72%] Linking CXX executable test_sbml_package_fbc cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/fbc/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_package_fbc.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test_sbml_package_fbc.dir/link.d CMakeFiles/test_sbml_package_fbc.dir/TestFbcAssociation.cpp.o CMakeFiles/test_sbml_package_fbc.dir/TestFbcExtension.cpp.o CMakeFiles/test_sbml_package_fbc.dir/TestReadFbcExtension.cpp.o CMakeFiles/test_sbml_package_fbc.dir/TestWriteFbcExtension.cpp.o CMakeFiles/test_sbml_package_fbc.dir/TestRunner.c.o -o test_sbml_package_fbc ../../../../../libsbml-static.a /usr/lib/riscv64-linux-gnu/libcheck.a /usr/lib/riscv64-linux-gnu/libbz2.so /usr/lib/riscv64-linux-gnu/libxml2.so /usr/lib/riscv64-linux-gnu/libz.so -lm -pthread -lrt -lsubunit make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 72%] Built target test_sbml_package_fbc make -f src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/build.make src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/test /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/fbc/validator/test /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/DependInfo.cmake "--color=" test_fbc_validator make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/build.make src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 73%] Building CXX object src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/TestFbcConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/fbc/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/TestFbcConsistencyValidator.cpp.o -MF CMakeFiles/test_fbc_validator.dir/TestFbcConsistencyValidator.cpp.o.d -o CMakeFiles/test_fbc_validator.dir/TestFbcConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/test/TestFbcConsistencyValidator.cpp [ 73%] Building CXX object src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/TestFile.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/fbc/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/TestFile.cpp.o -MF CMakeFiles/test_fbc_validator.dir/TestFile.cpp.o.d -o CMakeFiles/test_fbc_validator.dir/TestFile.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/test/TestFile.cpp [ 73%] Building CXX object src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/TestValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/fbc/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/TestValidator.cpp.o -MF CMakeFiles/test_fbc_validator.dir/TestValidator.cpp.o.d -o CMakeFiles/test_fbc_validator.dir/TestValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/test/TestValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/test/TestValidator.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 73%] Linking CXX executable test_fbc_validator cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/fbc/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_fbc_validator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test_fbc_validator.dir/link.d CMakeFiles/test_fbc_validator.dir/TestFbcConsistencyValidator.cpp.o CMakeFiles/test_fbc_validator.dir/TestFile.cpp.o CMakeFiles/test_fbc_validator.dir/TestValidator.cpp.o -o test_fbc_validator ../../../../../libsbml-static.a /usr/lib/riscv64-linux-gnu/libcheck.a /usr/lib/riscv64-linux-gnu/libbz2.so /usr/lib/riscv64-linux-gnu/libxml2.so /usr/lib/riscv64-linux-gnu/libz.so -lm -pthread -lrt -lsubunit make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 73%] Built target test_fbc_validator make -f src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/build.make src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/test /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/groups/extension/test /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/DependInfo.cmake "--color=" test_extension_package_groups make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/build.make src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 73%] Building CXX object src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestGroupsExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/groups/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestGroupsExtension.cpp.o -MF CMakeFiles/test_extension_package_groups.dir/TestGroupsExtension.cpp.o.d -o CMakeFiles/test_extension_package_groups.dir/TestGroupsExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/test/TestGroupsExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common/GroupsExtensionTypes.h:50, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/test/TestGroupsExtension.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/test/TestGroupsExtension.cpp:39: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/test/TestGroupsExtension.cpp: In function ‘void GroupsExtensionTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/test/TestGroupsExtension.cpp:75:10: warning: too many arguments for format [-Wformat-extra-args] 75 | fail("Failed to create a GroupsExtension object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 73%] Building CXX object src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestGroupsModelPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/groups/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestGroupsModelPlugin.cpp.o -MF CMakeFiles/test_extension_package_groups.dir/TestGroupsModelPlugin.cpp.o.d -o CMakeFiles/test_extension_package_groups.dir/TestGroupsModelPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/test/TestGroupsModelPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/GroupsExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common/GroupsExtensionTypes.h:50, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/test/TestGroupsModelPlugin.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 73%] Building CXX object src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestReadGroupsExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/groups/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestReadGroupsExtension.cpp.o -MF CMakeFiles/test_extension_package_groups.dir/TestReadGroupsExtension.cpp.o.d -o CMakeFiles/test_extension_package_groups.dir/TestReadGroupsExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/test/TestReadGroupsExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/test/TestReadGroupsExtension.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 73%] Building CXX object src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestWriteGroupsExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/groups/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestWriteGroupsExtension.cpp.o -MF CMakeFiles/test_extension_package_groups.dir/TestWriteGroupsExtension.cpp.o.d -o CMakeFiles/test_extension_package_groups.dir/TestWriteGroupsExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/test/TestWriteGroupsExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/test/TestWriteGroupsExtension.cpp:41: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/test/TestWriteGroupsExtension.cpp:40: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/test/TestWriteGroupsExtension.cpp: In function ‘void WriteGroupsExtensionTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/test/TestWriteGroupsExtension.cpp:72:22: warning: too many arguments for format [-Wformat-extra-args] 72 | fail("Failed to create a GroupsExtension object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 73%] Building CXX object src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestRunner.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/groups/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestRunner.c.o -MF CMakeFiles/test_extension_package_groups.dir/TestRunner.c.o.d -o CMakeFiles/test_extension_package_groups.dir/TestRunner.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension/test/TestRunner.c [ 73%] Linking CXX executable test_extension_package_groups cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/groups/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_extension_package_groups.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test_extension_package_groups.dir/link.d CMakeFiles/test_extension_package_groups.dir/TestGroupsExtension.cpp.o CMakeFiles/test_extension_package_groups.dir/TestGroupsModelPlugin.cpp.o CMakeFiles/test_extension_package_groups.dir/TestReadGroupsExtension.cpp.o CMakeFiles/test_extension_package_groups.dir/TestWriteGroupsExtension.cpp.o CMakeFiles/test_extension_package_groups.dir/TestRunner.c.o -o test_extension_package_groups ../../../../../libsbml-static.a /usr/lib/riscv64-linux-gnu/libcheck.a /usr/lib/riscv64-linux-gnu/libbz2.so /usr/lib/riscv64-linux-gnu/libxml2.so /usr/lib/riscv64-linux-gnu/libz.so -lm -pthread -lrt -lsubunit make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 73%] Built target test_extension_package_groups make -f src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/build.make src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/test /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/groups/validator/test /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/DependInfo.cmake "--color=" test_groups_validator make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/build.make src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 73%] Building CXX object src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/TestFile.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/groups/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/TestFile.cpp.o -MF CMakeFiles/test_groups_validator.dir/TestFile.cpp.o.d -o CMakeFiles/test_groups_validator.dir/TestFile.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/test/TestFile.cpp [ 73%] Building CXX object src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/TestGroupsConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/groups/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/TestGroupsConsistencyValidator.cpp.o -MF CMakeFiles/test_groups_validator.dir/TestGroupsConsistencyValidator.cpp.o.d -o CMakeFiles/test_groups_validator.dir/TestGroupsConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/test/TestGroupsConsistencyValidator.cpp [ 73%] Building CXX object src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/TestValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/groups/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/TestValidator.cpp.o -MF CMakeFiles/test_groups_validator.dir/TestValidator.cpp.o.d -o CMakeFiles/test_groups_validator.dir/TestValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/test/TestValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/test/TestValidator.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 73%] Linking CXX executable test_groups_validator cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/groups/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_groups_validator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test_groups_validator.dir/link.d CMakeFiles/test_groups_validator.dir/TestFile.cpp.o CMakeFiles/test_groups_validator.dir/TestGroupsConsistencyValidator.cpp.o CMakeFiles/test_groups_validator.dir/TestValidator.cpp.o -o test_groups_validator ../../../../../libsbml-static.a /usr/lib/riscv64-linux-gnu/libcheck.a /usr/lib/riscv64-linux-gnu/libbz2.so /usr/lib/riscv64-linux-gnu/libxml2.so /usr/lib/riscv64-linux-gnu/libz.so -lm -pthread -lrt -lsubunit make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 73%] Built target test_groups_validator make -f src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/build.make src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/test /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/l3v2extendedmath/validator/test /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/DependInfo.cmake "--color=" test_l3v2extendedmath_validator make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/build.make src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 73%] Building CXX object src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/TestFile.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/l3v2extendedmath/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/TestFile.cpp.o -MF CMakeFiles/test_l3v2extendedmath_validator.dir/TestFile.cpp.o.d -o CMakeFiles/test_l3v2extendedmath_validator.dir/TestFile.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/test/TestFile.cpp [ 73%] Building CXX object src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/TestL3v2MathConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/l3v2extendedmath/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/TestL3v2MathConsistencyValidator.cpp.o -MF CMakeFiles/test_l3v2extendedmath_validator.dir/TestL3v2MathConsistencyValidator.cpp.o.d -o CMakeFiles/test_l3v2extendedmath_validator.dir/TestL3v2MathConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/test/TestL3v2MathConsistencyValidator.cpp [ 73%] Building CXX object src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/TestValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/l3v2extendedmath/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/TestValidator.cpp.o -MF CMakeFiles/test_l3v2extendedmath_validator.dir/TestValidator.cpp.o.d -o CMakeFiles/test_l3v2extendedmath_validator.dir/TestValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/test/TestValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/test/TestValidator.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 73%] Linking CXX executable test_l3v2extendedmath_validator cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/l3v2extendedmath/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_l3v2extendedmath_validator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test_l3v2extendedmath_validator.dir/link.d CMakeFiles/test_l3v2extendedmath_validator.dir/TestFile.cpp.o CMakeFiles/test_l3v2extendedmath_validator.dir/TestL3v2MathConsistencyValidator.cpp.o CMakeFiles/test_l3v2extendedmath_validator.dir/TestValidator.cpp.o -o test_l3v2extendedmath_validator ../../../../../libsbml-static.a /usr/lib/riscv64-linux-gnu/libcheck.a /usr/lib/riscv64-linux-gnu/libbz2.so /usr/lib/riscv64-linux-gnu/libxml2.so /usr/lib/riscv64-linux-gnu/libz.so -lm -pthread -lrt -lsubunit make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 73%] Built target test_l3v2extendedmath_validator make -f src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/build.make src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/test /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/l3v2extendedmath/extension/test /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/DependInfo.cmake "--color=" test_extension_package_l3v2extendedmath make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/build.make src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 74%] Building CXX object src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestL3v2EMExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/l3v2extendedmath/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestL3v2EMExtension.cpp.o -MF CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestL3v2EMExtension.cpp.o.d -o CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestL3v2EMExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/test/TestL3v2EMExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathExtension.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common/L3v2extendedmathExtensionTypes.h:50, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/test/TestL3v2EMExtension.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/test/TestL3v2EMExtension.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/test/TestL3v2EMExtension.cpp: In function ‘void L3v2EMExtensionTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/test/TestL3v2EMExtension.cpp:81:10: warning: too many arguments for format [-Wformat-extra-args] 81 | fail("Failed to create a L3v2extendedmathExtension object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 74%] Building CXX object src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestReadL3v2EMExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/l3v2extendedmath/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestReadL3v2EMExtension.cpp.o -MF CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestReadL3v2EMExtension.cpp.o.d -o CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestReadL3v2EMExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/test/TestReadL3v2EMExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/test/TestReadL3v2EMExtension.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 74%] Building CXX object src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestReadWriteInfix.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/l3v2extendedmath/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestReadWriteInfix.cpp.o -MF CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestReadWriteInfix.cpp.o.d -o CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestReadWriteInfix.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/test/TestReadWriteInfix.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/test/TestReadWriteInfix.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 74%] Building CXX object src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestWriteL3v2EMExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/l3v2extendedmath/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestWriteL3v2EMExtension.cpp.o -MF CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestWriteL3v2EMExtension.cpp.o.d -o CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestWriteL3v2EMExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/test/TestWriteL3v2EMExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/test/TestWriteL3v2EMExtension.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/test/TestWriteL3v2EMExtension.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/test/TestWriteL3v2EMExtension.cpp: In function ‘void WriteL3v2EMExtensionTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/test/TestWriteL3v2EMExtension.cpp:81:10: warning: too many arguments for format [-Wformat-extra-args] 81 | fail("Failed to create a L3v2extendedmathExtension object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/test/TestWriteL3v2EMExtension.cpp: At global scope: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/test/TestWriteL3v2EMExtension.cpp:469:13: warning: ‘test_L3v2EMExtension_read_disable_via_sbmldocument_and_write_L3V1V1’ defined but not used [-Wunused-variable] 469 | START_TEST (test_L3v2EMExtension_read_disable_via_sbmldocument_and_write_L3V1V1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/test/TestWriteL3v2EMExtension.cpp:386:13: warning: ‘test_L3v2EMExtension_read_enable_via_sbmldocument_and_write_L3V1V1’ defined but not used [-Wunused-variable] 386 | START_TEST (test_L3v2EMExtension_read_enable_via_sbmldocument_and_write_L3V1V1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/test/TestWriteL3v2EMExtension.cpp:309:13: warning: ‘test_L3v2EMExtension_read_disable_via_model_and_write_L3V1V1’ defined but not used [-Wunused-variable] 309 | START_TEST (test_L3v2EMExtension_read_disable_via_model_and_write_L3V1V1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/test/TestWriteL3v2EMExtension.cpp:225:13: warning: ‘test_L3v2EMExtension_read_enable_via_model_and_write_L3V1V1’ defined but not used [-Wunused-variable] 225 | START_TEST (test_L3v2EMExtension_read_enable_via_model_and_write_L3V1V1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 74%] Building CXX object src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestRunner.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/l3v2extendedmath/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestRunner.c.o -MF CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestRunner.c.o.d -o CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestRunner.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension/test/TestRunner.c [ 74%] Linking CXX executable test_extension_package_l3v2extendedmath cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/l3v2extendedmath/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_extension_package_l3v2extendedmath.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test_extension_package_l3v2extendedmath.dir/link.d CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestL3v2EMExtension.cpp.o CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestReadL3v2EMExtension.cpp.o CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestReadWriteInfix.cpp.o CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestWriteL3v2EMExtension.cpp.o CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestRunner.c.o -o test_extension_package_l3v2extendedmath ../../../../../libsbml-static.a /usr/lib/riscv64-linux-gnu/libcheck.a /usr/lib/riscv64-linux-gnu/libbz2.so /usr/lib/riscv64-linux-gnu/libxml2.so /usr/lib/riscv64-linux-gnu/libz.so -lm -pthread -lrt -lsubunit make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 74%] Built target test_extension_package_l3v2extendedmath make -f src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/build.make src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/sbml/test /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/DependInfo.cmake "--color=" test_sbml_package_layout make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/build.make src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 74%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestBoundingBox.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestBoundingBox.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestBoundingBox.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestBoundingBox.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestBoundingBox.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestBoundingBox.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestBoundingBox.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestBoundingBox.cpp: In function ‘void BoundingBoxTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestBoundingBox.cpp:60:10: warning: too many arguments for format [-Wformat-extra-args] 60 | fail("BoundingBox(); returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 74%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestCompartmentGlyph.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestCompartmentGlyph.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestCompartmentGlyph.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestCompartmentGlyph.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestCompartmentGlyph.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestCompartmentGlyph.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestCompartmentGlyph.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestCompartmentGlyph.cpp: In function ‘void CompartmentGlyphTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestCompartmentGlyph.cpp:64:10: warning: too many arguments for format [-Wformat-extra-args] 64 | fail("new(std::nothrow) CompartmentGlyph() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 74%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestCubicBezier.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestCubicBezier.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestCubicBezier.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestCubicBezier.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestCubicBezier.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestCubicBezier.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestCubicBezier.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestCubicBezier.cpp: In function ‘void CubicBezierTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestCubicBezier.cpp:63:10: warning: too many arguments for format [-Wformat-extra-args] 63 | fail("CubicBezier_create(); returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 74%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestCurve.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestCurve.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestCurve.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestCurve.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestCurve.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestCurve.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestCurve.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestCurve.cpp: In function ‘void CurveTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestCurve.cpp:60:10: warning: too many arguments for format [-Wformat-extra-args] 60 | fail("Curve_create(); returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 74%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestDimensions.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestDimensions.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestDimensions.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestDimensions.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestDimensions.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Dimensions.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestDimensions.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestDimensions.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestDimensions.cpp: In function ‘void DimensionsTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestDimensions.cpp:62:10: warning: too many arguments for format [-Wformat-extra-args] 62 | fail("new(std::nothrow)Dimensions() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 74%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestGeneralGlyph.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestGeneralGlyph.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestGeneralGlyph.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestGeneralGlyph.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestGeneralGlyph.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestGeneralGlyph.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:65: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:329:26: note: by ‘virtual GeneralGlyph& GeneralGlyph::operator=(const GeneralGlyph&)’ 329 | virtual GeneralGlyph& operator=(const GeneralGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestGeneralGlyph.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestGeneralGlyph.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestGeneralGlyph.cpp: In function ‘void GeneralGlyphTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestGeneralGlyph.cpp:69:10: warning: too many arguments for format [-Wformat-extra-args] 69 | fail("new(std::nothrow) GeneralGlyph() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 74%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestGraphicalObject.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestGraphicalObject.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestGraphicalObject.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestGraphicalObject.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestGraphicalObject.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:44, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestGraphicalObject.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:62: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:63: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:329:26: note: by ‘virtual GeneralGlyph& GeneralGlyph::operator=(const GeneralGlyph&)’ 329 | virtual GeneralGlyph& operator=(const GeneralGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestGraphicalObject.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestGraphicalObject.cpp: In function ‘void GraphicalObjectTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestGraphicalObject.cpp:71:10: warning: too many arguments for format [-Wformat-extra-args] 71 | fail("new (std::nothrow) GraphicalObject returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 74%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayout.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayout.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestLayout.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestLayout.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestLayout.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Dimensions.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestLayout.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestLayout.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:329:26: note: by ‘virtual GeneralGlyph& GeneralGlyph::operator=(const GeneralGlyph&)’ 329 | virtual GeneralGlyph& operator=(const GeneralGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestLayout.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestLayout.cpp: In function ‘void LayoutTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestLayout.cpp:68:10: warning: too many arguments for format [-Wformat-extra-args] 68 | fail("new(std::nothrow) Layout() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 74%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayoutCreation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayoutCreation.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestLayoutCreation.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestLayoutCreation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestLayoutCreation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Dimensions.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestLayoutCreation.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestLayoutCreation.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ [ 74%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayoutFormatter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayoutFormatter.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestLayoutFormatter.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestLayoutFormatter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestLayoutFormatter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Dimensions.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestLayoutFormatter.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestLayoutFormatter.cpp:54: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ [ 74%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayoutWriting.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayoutWriting.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestLayoutWriting.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestLayoutWriting.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestLayoutWriting.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestLayoutWriting.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:63: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestLayoutWriting.cpp:56: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ [ 75%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLineSegment.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLineSegment.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestLineSegment.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestLineSegment.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestLineSegment.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestLineSegment.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestLineSegment.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestLineSegment.cpp: In function ‘void LineSegmentTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestLineSegment.cpp:64:10: warning: too many arguments for format [-Wformat-extra-args] 64 | fail("LineSegment_create(); returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestPoint.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestPoint.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestPoint.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestPoint.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestPoint.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestPoint.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestPoint.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestPoint.cpp: In function ‘void PointTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestPoint.cpp:62:10: warning: too many arguments for format [-Wformat-extra-args] 62 | fail("new(std::nothrow) Point() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestPoint.cpp: In function ‘void test_Point_createWithCoordinates_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestPoint.cpp:91:10: warning: too many arguments for format [-Wformat-extra-args] 91 | fail("new(std::nothrow) Point(1.2,0.4,3.1415) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestReactionGlyph.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestReactionGlyph.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestReactionGlyph.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestReactionGlyph.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestReactionGlyph.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:70, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestReactionGlyph.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestReactionGlyph.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestReactionGlyph.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestReactionGlyph.cpp: In function ‘void ReactionGlyphTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestReactionGlyph.cpp:69:10: warning: too many arguments for format [-Wformat-extra-args] 69 | fail("new(std::nothrow) ReactionGlyph() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestReferenceGlyph.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestReferenceGlyph.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestReferenceGlyph.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestReferenceGlyph.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestReferenceGlyph.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestReferenceGlyph.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:64: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestReferenceGlyph.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestReferenceGlyph.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestReferenceGlyph.cpp: In function ‘void ReferenceGlyphTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestReferenceGlyph.cpp:68:10: warning: too many arguments for format [-Wformat-extra-args] 68 | fail("new(std::nothrow) ReferenceGlyph() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestSBMLHandler.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestSBMLHandler.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestSBMLHandler.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestSBMLHandler.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestSBMLHandler.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestSBMLHandler.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestSBMLHandler.cpp:54: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestSBMLHandler.cpp:61: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ [ 75%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestSpeciesGlyph.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestSpeciesGlyph.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestSpeciesGlyph.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestSpeciesGlyph.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestSpeciesGlyph.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:58, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestSpeciesGlyph.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestSpeciesGlyph.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestSpeciesGlyph.cpp: In function ‘void SpeciesGlyphTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestSpeciesGlyph.cpp:66:10: warning: too many arguments for format [-Wformat-extra-args] 66 | fail("new(std::nothrow) SpeciesGlyph() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestSpeciesReferenceGlyph.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestSpeciesReferenceGlyph.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestSpeciesReferenceGlyph.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestSpeciesReferenceGlyph.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestSpeciesReferenceGlyph.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestSpeciesReferenceGlyph.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:65: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestSpeciesReferenceGlyph.cpp:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestSpeciesReferenceGlyph.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestSpeciesReferenceGlyph.cpp: In function ‘void SpeciesReferenceGlyphTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestSpeciesReferenceGlyph.cpp:68:10: warning: too many arguments for format [-Wformat-extra-args] 68 | fail("new(std::nothrow) SpeciesReferenceGlyph() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestTextGlyph.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestTextGlyph.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestTextGlyph.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestTextGlyph.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestTextGlyph.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Point.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:59, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestTextGlyph.cpp:40: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestTextGlyph.cpp:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestTextGlyph.cpp: In function ‘void TextGlyphTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestTextGlyph.cpp:57:10: warning: too many arguments for format [-Wformat-extra-args] 57 | fail("new(std::nothrow) TextGlyph() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/utility.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/utility.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/utility.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/utility.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/utility.cpp [ 75%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestRunner.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestRunner.c.o -MF CMakeFiles/test_sbml_package_layout.dir/TestRunner.c.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestRunner.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/test/TestRunner.c [ 75%] Linking CXX executable test_sbml_package_layout cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/sbml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_package_layout.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test_sbml_package_layout.dir/link.d CMakeFiles/test_sbml_package_layout.dir/TestBoundingBox.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestCompartmentGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestCubicBezier.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestCurve.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestDimensions.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestGeneralGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestGraphicalObject.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestLayout.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestLayoutCreation.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestLayoutFormatter.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestLayoutWriting.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestLineSegment.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestPoint.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestReactionGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestReferenceGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestSBMLHandler.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestSpeciesGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestSpeciesReferenceGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestTextGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/utility.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestRunner.c.o -o test_sbml_package_layout ../../../../../libsbml-static.a /usr/lib/riscv64-linux-gnu/libcheck.a /usr/lib/riscv64-linux-gnu/libbz2.so /usr/lib/riscv64-linux-gnu/libxml2.so /usr/lib/riscv64-linux-gnu/libz.so -lm -pthread -lrt -lsubunit make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 75%] Built target test_sbml_package_layout make -f src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/build.make src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/test /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/validator/test /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/DependInfo.cmake "--color=" test_layout_validator make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/build.make src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 76%] Building CXX object src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/TestFile.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/TestFile.cpp.o -MF CMakeFiles/test_layout_validator.dir/TestFile.cpp.o.d -o CMakeFiles/test_layout_validator.dir/TestFile.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/test/TestFile.cpp [ 76%] Building CXX object src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/TestLayoutConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/TestLayoutConsistencyValidator.cpp.o -MF CMakeFiles/test_layout_validator.dir/TestLayoutConsistencyValidator.cpp.o.d -o CMakeFiles/test_layout_validator.dir/TestLayoutConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/test/TestLayoutConsistencyValidator.cpp [ 76%] Building CXX object src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/TestValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/TestValidator.cpp.o -MF CMakeFiles/test_layout_validator.dir/TestValidator.cpp.o.d -o CMakeFiles/test_layout_validator.dir/TestValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/test/TestValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/validator/test/TestValidator.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 76%] Linking CXX executable test_layout_validator cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/layout/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_layout_validator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test_layout_validator.dir/link.d CMakeFiles/test_layout_validator.dir/TestFile.cpp.o CMakeFiles/test_layout_validator.dir/TestLayoutConsistencyValidator.cpp.o CMakeFiles/test_layout_validator.dir/TestValidator.cpp.o -o test_layout_validator ../../../../../libsbml-static.a /usr/lib/riscv64-linux-gnu/libcheck.a /usr/lib/riscv64-linux-gnu/libbz2.so /usr/lib/riscv64-linux-gnu/libxml2.so /usr/lib/riscv64-linux-gnu/libz.so -lm -pthread -lrt -lsubunit make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 76%] Built target test_layout_validator make -f src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/build.make src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/test /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/qual/extension/test /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/DependInfo.cmake "--color=" test_extension_package_qual make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/build.make src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 76%] Building CXX object src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestGetAllElements.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/qual/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestGetAllElements.cpp.o -MF CMakeFiles/test_extension_package_qual.dir/TestGetAllElements.cpp.o.d -o CMakeFiles/test_extension_package_qual.dir/TestGetAllElements.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/test/TestGetAllElements.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/test/TestGetAllElements.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 76%] Building CXX object src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestQualExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/qual/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestQualExtension.cpp.o -MF CMakeFiles/test_extension_package_qual.dir/TestQualExtension.cpp.o.d -o CMakeFiles/test_extension_package_qual.dir/TestQualExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/test/TestQualExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common/QualExtensionTypes.h:50, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/test/TestQualExtension.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/test/TestQualExtension.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/test/TestQualExtension.cpp: In function ‘void QualExtensionTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/test/TestQualExtension.cpp:84:10: warning: too many arguments for format [-Wformat-extra-args] 84 | fail("Failed to create a QualExtension object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 76%] Building CXX object src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestReadQualExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/qual/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestReadQualExtension.cpp.o -MF CMakeFiles/test_extension_package_qual.dir/TestReadQualExtension.cpp.o.d -o CMakeFiles/test_extension_package_qual.dir/TestReadQualExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/test/TestReadQualExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/test/TestReadQualExtension.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 76%] Building CXX object src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestWriteQualExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/qual/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestWriteQualExtension.cpp.o -MF CMakeFiles/test_extension_package_qual.dir/TestWriteQualExtension.cpp.o.d -o CMakeFiles/test_extension_package_qual.dir/TestWriteQualExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/test/TestWriteQualExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/test/TestWriteQualExtension.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/test/TestWriteQualExtension.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/test/TestWriteQualExtension.cpp: In function ‘void WriteQualExtensionTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/test/TestWriteQualExtension.cpp:82:22: warning: too many arguments for format [-Wformat-extra-args] 82 | fail("Failed to create a QualExtension object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 76%] Building CXX object src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestRunner.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/qual/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestRunner.c.o -MF CMakeFiles/test_extension_package_qual.dir/TestRunner.c.o.d -o CMakeFiles/test_extension_package_qual.dir/TestRunner.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/test/TestRunner.c [ 76%] Linking CXX executable test_extension_package_qual cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/qual/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_extension_package_qual.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test_extension_package_qual.dir/link.d CMakeFiles/test_extension_package_qual.dir/TestGetAllElements.cpp.o CMakeFiles/test_extension_package_qual.dir/TestQualExtension.cpp.o CMakeFiles/test_extension_package_qual.dir/TestReadQualExtension.cpp.o CMakeFiles/test_extension_package_qual.dir/TestWriteQualExtension.cpp.o CMakeFiles/test_extension_package_qual.dir/TestRunner.c.o -o test_extension_package_qual ../../../../../libsbml-static.a /usr/lib/riscv64-linux-gnu/libcheck.a /usr/lib/riscv64-linux-gnu/libbz2.so /usr/lib/riscv64-linux-gnu/libxml2.so /usr/lib/riscv64-linux-gnu/libz.so -lm -pthread -lrt -lsubunit make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 76%] Built target test_extension_package_qual make -f src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/build.make src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/qual/sbml/test /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/DependInfo.cmake "--color=" test_sbml_package_qual make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/build.make src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 77%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestCopyAndClone.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestCopyAndClone.cpp.o -MF CMakeFiles/test_sbml_package_qual.dir/TestCopyAndClone.cpp.o.d -o CMakeFiles/test_sbml_package_qual.dir/TestCopyAndClone.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestCopyAndClone.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/Input.h:107, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestCopyAndClone.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 77%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestDefaultTerm.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestDefaultTerm.cpp.o -MF CMakeFiles/test_sbml_package_qual.dir/TestDefaultTerm.cpp.o.d -o CMakeFiles/test_sbml_package_qual.dir/TestDefaultTerm.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestDefaultTerm.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/L3Parser.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestDefaultTerm.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestDefaultTerm.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestDefaultTerm.cpp: In function ‘void DefaultTermTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestDefaultTerm.cpp:77:10: warning: too many arguments for format [-Wformat-extra-args] 77 | fail("Failed to create a DefaultTerm object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 77%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestFunctionTerm.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestFunctionTerm.cpp.o -MF CMakeFiles/test_sbml_package_qual.dir/TestFunctionTerm.cpp.o.d -o CMakeFiles/test_sbml_package_qual.dir/TestFunctionTerm.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestFunctionTerm.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/L3Parser.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestFunctionTerm.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestFunctionTerm.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestFunctionTerm.cpp: In function ‘void FunctionTermTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestFunctionTerm.cpp:78:10: warning: too many arguments for format [-Wformat-extra-args] 78 | fail("Failed to create a FunctionTerm object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 77%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestInput.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestInput.cpp.o -MF CMakeFiles/test_sbml_package_qual.dir/TestInput.cpp.o.d -o CMakeFiles/test_sbml_package_qual.dir/TestInput.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestInput.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common/QualExtensionTypes.h:50, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestInput.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestInput.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestInput.cpp: In function ‘void InputTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestInput.cpp:76:10: warning: too many arguments for format [-Wformat-extra-args] 76 | fail("Failed to create a Input object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 77%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestListOfFunctionTerms.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestListOfFunctionTerms.cpp.o -MF CMakeFiles/test_sbml_package_qual.dir/TestListOfFunctionTerms.cpp.o.d -o CMakeFiles/test_sbml_package_qual.dir/TestListOfFunctionTerms.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestListOfFunctionTerms.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/L3Parser.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestListOfFunctionTerms.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestListOfFunctionTerms.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestListOfFunctionTerms.cpp: In function ‘void ListOfFunctionTermsTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestListOfFunctionTerms.cpp:77:10: warning: too many arguments for format [-Wformat-extra-args] 77 | fail("Failed to create a ListOfFunctionTerms object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 77%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestOutput.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestOutput.cpp.o -MF CMakeFiles/test_sbml_package_qual.dir/TestOutput.cpp.o.d -o CMakeFiles/test_sbml_package_qual.dir/TestOutput.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestOutput.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common/QualExtensionTypes.h:50, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestOutput.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestOutput.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestOutput.cpp: In function ‘void OutputTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestOutput.cpp:76:10: warning: too many arguments for format [-Wformat-extra-args] 76 | fail("Failed to create a Output object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 77%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestQualitativeSpecies.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestQualitativeSpecies.cpp.o -MF CMakeFiles/test_sbml_package_qual.dir/TestQualitativeSpecies.cpp.o.d -o CMakeFiles/test_sbml_package_qual.dir/TestQualitativeSpecies.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestQualitativeSpecies.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common/QualExtensionTypes.h:50, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestQualitativeSpecies.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestQualitativeSpecies.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestQualitativeSpecies.cpp: In function ‘void QualitativeSpeciesTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestQualitativeSpecies.cpp:76:10: warning: too many arguments for format [-Wformat-extra-args] 76 | fail("Failed to create a QualitativeSpecies object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 77%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestTransition.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestTransition.cpp.o -MF CMakeFiles/test_sbml_package_qual.dir/TestTransition.cpp.o.d -o CMakeFiles/test_sbml_package_qual.dir/TestTransition.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestTransition.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension/QualExtension.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common/QualExtensionTypes.h:50, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestTransition.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestTransition.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestTransition.cpp: In function ‘void TransitionTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestTransition.cpp:76:10: warning: too many arguments for format [-Wformat-extra-args] 76 | fail("Failed to create a Transition object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 77%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestRunner.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestRunner.c.o -MF CMakeFiles/test_sbml_package_qual.dir/TestRunner.c.o.d -o CMakeFiles/test_sbml_package_qual.dir/TestRunner.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml/test/TestRunner.c [ 77%] Linking CXX executable test_sbml_package_qual cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/qual/sbml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_package_qual.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test_sbml_package_qual.dir/link.d CMakeFiles/test_sbml_package_qual.dir/TestCopyAndClone.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestDefaultTerm.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestFunctionTerm.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestInput.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestListOfFunctionTerms.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestOutput.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestQualitativeSpecies.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestTransition.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestRunner.c.o -o test_sbml_package_qual ../../../../../libsbml-static.a /usr/lib/riscv64-linux-gnu/libcheck.a /usr/lib/riscv64-linux-gnu/libbz2.so /usr/lib/riscv64-linux-gnu/libxml2.so /usr/lib/riscv64-linux-gnu/libz.so -lm -pthread -lrt -lsubunit make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 77%] Built target test_sbml_package_qual make -f src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/build.make src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/test /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/qual/validator/test /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/DependInfo.cmake "--color=" test_qual_validator make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/build.make src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 77%] Building CXX object src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/TestFile.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/qual/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/TestFile.cpp.o -MF CMakeFiles/test_qual_validator.dir/TestFile.cpp.o.d -o CMakeFiles/test_qual_validator.dir/TestFile.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/test/TestFile.cpp [ 77%] Building CXX object src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/TestQualConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/qual/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/TestQualConsistencyValidator.cpp.o -MF CMakeFiles/test_qual_validator.dir/TestQualConsistencyValidator.cpp.o.d -o CMakeFiles/test_qual_validator.dir/TestQualConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/test/TestQualConsistencyValidator.cpp [ 77%] Building CXX object src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/TestValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/qual/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/TestValidator.cpp.o -MF CMakeFiles/test_qual_validator.dir/TestValidator.cpp.o.d -o CMakeFiles/test_qual_validator.dir/TestValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/test/TestValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/test/TestValidator.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 77%] Linking CXX executable test_qual_validator cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/qual/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_qual_validator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test_qual_validator.dir/link.d CMakeFiles/test_qual_validator.dir/TestFile.cpp.o CMakeFiles/test_qual_validator.dir/TestQualConsistencyValidator.cpp.o CMakeFiles/test_qual_validator.dir/TestValidator.cpp.o -o test_qual_validator ../../../../../libsbml-static.a /usr/lib/riscv64-linux-gnu/libcheck.a /usr/lib/riscv64-linux-gnu/libbz2.so /usr/lib/riscv64-linux-gnu/libxml2.so /usr/lib/riscv64-linux-gnu/libz.so -lm -pthread -lrt -lsubunit make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 77%] Built target test_qual_validator make -f src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/build.make src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/DependInfo.cmake "--color=" test_sbml_package_render make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/build.make src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 77%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestColorDefinition.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestColorDefinition.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestColorDefinition.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestColorDefinition.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestColorDefinition.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestColorDefinition.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestColorDefinition.cpp:55: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestColorDefinition.cpp: In function ‘void ColorDefinitionTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestColorDefinition.cpp:74:14: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("new(std::nothrow)ColorDefinition(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 77%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestEllipse.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestEllipse.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestEllipse.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestEllipse.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestEllipse.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestEllipse.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestEllipse.cpp:54: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestEllipse.cpp: In function ‘void EllipseTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestEllipse.cpp:74:14: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("new(std::nothrow)Ellipse(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 78%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGlobalRenderInformation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGlobalRenderInformation.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestGlobalRenderInformation.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestGlobalRenderInformation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGlobalRenderInformation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGlobalRenderInformation.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGlobalRenderInformation.cpp:56: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGlobalRenderInformation.cpp: In function ‘void GlobalRenderInformationTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGlobalRenderInformation.cpp:76:14: warning: too many arguments for format [-Wformat-extra-args] 76 | fail("new(std::nothrow)GlobalRenderInformation(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 78%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGlobalStyle.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGlobalStyle.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestGlobalStyle.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestGlobalStyle.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGlobalStyle.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGlobalStyle.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGlobalStyle.cpp:57: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGlobalStyle.cpp: In function ‘void GlobalStyleTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGlobalStyle.cpp:77:14: warning: too many arguments for format [-Wformat-extra-args] 77 | fail("new(std::nothrow)GlobalStyle(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 78%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGradientBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGradientBase.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestGradientBase.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestGradientBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGradientBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGradientBase.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGradientBase.cpp:55: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGradientBase.cpp: In function ‘void GradientBaseTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGradientBase.cpp:75:14: warning: too many arguments for format [-Wformat-extra-args] 75 | fail("new(std::nothrow)LinearGradient(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 78%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGradientStop.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGradientStop.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestGradientStop.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestGradientStop.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGradientStop.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGradientStop.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGradientStop.cpp:54: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGradientStop.cpp: In function ‘void GradientStop_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGradientStop.cpp:74:14: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("new(std::nothrow)GradientStop(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 78%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive1D.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive1D.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive1D.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive1D.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGraphicalPrimitive1D.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGraphicalPrimitive1D.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGraphicalPrimitive1D.cpp:55: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGraphicalPrimitive1D.cpp: In function ‘void GraphicalPrimitive1DTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGraphicalPrimitive1D.cpp:75:14: warning: too many arguments for format [-Wformat-extra-args] 75 | fail("new(std::nothrow)Text(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 78%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive2D.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive2D.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive2D.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive2D.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGraphicalPrimitive2D.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGraphicalPrimitive2D.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGraphicalPrimitive2D.cpp:55: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGraphicalPrimitive2D.cpp: In function ‘void GraphicalPrimitive2DTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGraphicalPrimitive2D.cpp:75:14: warning: too many arguments for format [-Wformat-extra-args] 75 | fail("new(std::nothrow)Rectangle(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 78%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGroup.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGroup.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestGroup.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestGroup.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGroup.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGroup.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGroup.cpp:54: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGroup.cpp: In function ‘void GroupTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestGroup.cpp:74:14: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("new(std::nothrow)Group(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 78%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestImage.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestImage.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestImage.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestImage.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestImage.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestImage.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestImage.cpp:54: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestImage.cpp: In function ‘void ImageTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestImage.cpp:74:14: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("new(std::nothrow)Image(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 78%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLineEnding.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLineEnding.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestLineEnding.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestLineEnding.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestLineEnding.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestLineEnding.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestLineEnding.cpp:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestLineEnding.cpp: In function ‘void LineEndingTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestLineEnding.cpp:75:14: warning: too many arguments for format [-Wformat-extra-args] 75 | fail("new(std::nothrow)LineEnding(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 78%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLinearGradient.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLinearGradient.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestLinearGradient.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestLinearGradient.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestLinearGradient.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestLinearGradient.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestLinearGradient.cpp:54: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestLinearGradient.cpp: In function ‘void LinearGradientTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestLinearGradient.cpp:74:14: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("new(std::nothrow)LinearGradient(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 78%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLocalRenderInformation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLocalRenderInformation.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestLocalRenderInformation.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestLocalRenderInformation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestLocalRenderInformation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestLocalRenderInformation.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestLocalRenderInformation.cpp:56: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestLocalRenderInformation.cpp: In function ‘void LocalRenderInformationTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestLocalRenderInformation.cpp:76:14: warning: too many arguments for format [-Wformat-extra-args] 76 | fail("new(std::nothrow)LocalRenderInformation(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 78%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLocalStyle.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLocalStyle.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestLocalStyle.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestLocalStyle.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestLocalStyle.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestLocalStyle.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestLocalStyle.cpp:57: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestLocalStyle.cpp: In function ‘void LocalStyleTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestLocalStyle.cpp:77:14: warning: too many arguments for format [-Wformat-extra-args] 77 | fail("new(std::nothrow)LocalStyle(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 79%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestPolygon.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestPolygon.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestPolygon.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestPolygon.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestPolygon.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestPolygon.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestPolygon.cpp:54: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestPolygon.cpp: In function ‘void PolygonTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestPolygon.cpp:74:14: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("new(std::nothrow)Polygon(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 79%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRadialGradient.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRadialGradient.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestRadialGradient.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestRadialGradient.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRadialGradient.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRadialGradient.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRadialGradient.cpp:54: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRadialGradient.cpp: In function ‘void RadialGradientTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRadialGradient.cpp:74:14: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("new(std::nothrow)RadialGradient(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 79%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRectangle.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRectangle.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestRectangle.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestRectangle.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRectangle.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRectangle.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRectangle.cpp:54: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRectangle.cpp: In function ‘void RectangleTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRectangle.cpp:74:14: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("new(std::nothrow)Rectangle(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 79%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRelAbsVector.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRelAbsVector.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestRelAbsVector.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestRelAbsVector.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRelAbsVector.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RelAbsVector.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRelAbsVector.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRelAbsVector.cpp:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRelAbsVector.cpp: In function ‘void RelAbsVectorTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRelAbsVector.cpp:72:14: warning: too many arguments for format [-Wformat-extra-args] 72 | fail("new(std::nothrow)RelAbsVector() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 79%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderCubicBezier.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderCubicBezier.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestRenderCubicBezier.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestRenderCubicBezier.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderCubicBezier.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderCubicBezier.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderCubicBezier.cpp:55: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderCubicBezier.cpp: In function ‘void RenderCubicBezierTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderCubicBezier.cpp:75:14: warning: too many arguments for format [-Wformat-extra-args] 75 | fail("new(std::nothrow)RenderCubicBezier(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 79%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderCurve.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderCurve.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestRenderCurve.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestRenderCurve.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderCurve.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderCurve.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderCurve.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderCurve.cpp: In function ‘void RenderCurveTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderCurve.cpp:72:14: warning: too many arguments for format [-Wformat-extra-args] 72 | fail("new(std::nothrow)RenderCurve(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 79%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderExtension.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestRenderExtension.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestRenderExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common/RenderExtensionTypes.h:50, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderExtension.cpp:13: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/util/LayoutUtilities.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderCubicBezier.h:72, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/ListOfCurveElements.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Polygon.h:75, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common/RenderExtensionTypes.h:75: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:45, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderExtension.cpp:14: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:62: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/common/LayoutExtensionTypes.h:63: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:329:26: note: by ‘virtual GeneralGlyph& GeneralGlyph::operator=(const GeneralGlyph&)’ 329 | virtual GeneralGlyph& operator=(const GeneralGlyph& source); | ^~~~~~~~ [ 79%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderInformationBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderInformationBase.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestRenderInformationBase.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestRenderInformationBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderInformationBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderInformationBase.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderInformationBase.cpp:55: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderInformationBase.cpp: In function ‘void RenderInformationBaseTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderInformationBase.cpp:75:14: warning: too many arguments for format [-Wformat-extra-args] 75 | fail("new(std::nothrow)GlobalRenderInformation(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 79%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderPoint.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderPoint.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestRenderPoint.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestRenderPoint.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderPoint.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderPoint.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderPoint.cpp:54: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderPoint.cpp: In function ‘void RenderPointTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderPoint.cpp:74:14: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("new(std::nothrow)RenderPoint(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 79%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderReading.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderReading.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestRenderReading.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestRenderReading.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderReading.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderReading.cpp:5: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderReading.cpp:8: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderReading.cpp:24: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ [ 79%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderWriting.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderWriting.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestRenderWriting.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestRenderWriting.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderWriting.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderWriting.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/extension/LayoutModelPlugin.h:63, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderWriting.cpp:55: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Curve.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRenderWriting.cpp:59: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ [ 79%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestStyle.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestStyle.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestStyle.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestStyle.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestStyle.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Style.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestStyle.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestStyle.cpp:54: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestStyle.cpp: In function ‘void StyleTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestStyle.cpp:74:14: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("new(std::nothrow)LocalStyle(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 80%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestText.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestText.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestText.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestText.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestText.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestText.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestText.cpp:54: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestText.cpp: In function ‘void TextTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestText.cpp:74:14: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("new(std::nothrow)Text(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 80%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestTransformation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestTransformation.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestTransformation.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestTransformation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestTransformation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Transformation.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestTransformation.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestTransformation.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestTransformation.cpp: In function ‘void TransformationTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestTransformation.cpp:69:14: warning: too many arguments for format [-Wformat-extra-args] 69 | fail("new(std::nothrow)Text(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 80%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestTransformation2D.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestTransformation2D.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestTransformation2D.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestTransformation2D.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestTransformation2D.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension/RenderExtension.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Transformation.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Transformation2D.h:73, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestTransformation2D.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestTransformation2D.cpp:54: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestTransformation2D.cpp: In function ‘void Transformation2DTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestTransformation2D.cpp:74:14: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("new(std::nothrow)Text(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 80%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRunner.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRunner.c.o -MF CMakeFiles/test_sbml_package_render.dir/TestRunner.c.o.d -o CMakeFiles/test_sbml_package_render.dir/TestRunner.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/test/TestRunner.c [ 80%] Linking CXX executable test_sbml_package_render cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/sbml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_package_render.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test_sbml_package_render.dir/link.d CMakeFiles/test_sbml_package_render.dir/TestColorDefinition.cpp.o CMakeFiles/test_sbml_package_render.dir/TestEllipse.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGlobalRenderInformation.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGlobalStyle.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGradientBase.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGradientStop.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive1D.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive2D.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGroup.cpp.o CMakeFiles/test_sbml_package_render.dir/TestImage.cpp.o CMakeFiles/test_sbml_package_render.dir/TestLineEnding.cpp.o CMakeFiles/test_sbml_package_render.dir/TestLinearGradient.cpp.o CMakeFiles/test_sbml_package_render.dir/TestLocalRenderInformation.cpp.o CMakeFiles/test_sbml_package_render.dir/TestLocalStyle.cpp.o CMakeFiles/test_sbml_package_render.dir/TestPolygon.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRadialGradient.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRectangle.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRelAbsVector.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderCubicBezier.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderCurve.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderExtension.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderInformationBase.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderPoint.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderReading.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderWriting.cpp.o CMakeFiles/test_sbml_package_render.dir/TestStyle.cpp.o CMakeFiles/test_sbml_package_render.dir/TestText.cpp.o CMakeFiles/test_sbml_package_render.dir/TestTransformation.cpp.o CMakeFiles/test_sbml_package_render.dir/TestTransformation2D.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRunner.c.o -o test_sbml_package_render ../../../../../libsbml-static.a /usr/lib/riscv64-linux-gnu/libcheck.a /usr/lib/riscv64-linux-gnu/libbz2.so /usr/lib/riscv64-linux-gnu/libxml2.so /usr/lib/riscv64-linux-gnu/libz.so -lm -pthread -lrt -lsubunit make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 80%] Built target test_sbml_package_render make -f src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/build.make src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/test /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/validator/test /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/DependInfo.cmake "--color=" test_render_validator make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/build.make src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 80%] Building CXX object src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/TestFile.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/TestFile.cpp.o -MF CMakeFiles/test_render_validator.dir/TestFile.cpp.o.d -o CMakeFiles/test_render_validator.dir/TestFile.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/test/TestFile.cpp [ 80%] Building CXX object src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/TestRenderConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/TestRenderConsistencyValidator.cpp.o -MF CMakeFiles/test_render_validator.dir/TestRenderConsistencyValidator.cpp.o.d -o CMakeFiles/test_render_validator.dir/TestRenderConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/test/TestRenderConsistencyValidator.cpp [ 80%] Building CXX object src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/TestValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/TestValidator.cpp.o -MF CMakeFiles/test_render_validator.dir/TestValidator.cpp.o.d -o CMakeFiles/test_render_validator.dir/TestValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/test/TestValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/test/TestValidator.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 81%] Linking CXX executable test_render_validator cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/packages/render/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_render_validator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test_render_validator.dir/link.d CMakeFiles/test_render_validator.dir/TestFile.cpp.o CMakeFiles/test_render_validator.dir/TestRenderConsistencyValidator.cpp.o CMakeFiles/test_render_validator.dir/TestValidator.cpp.o -o test_render_validator ../../../../../libsbml-static.a /usr/lib/riscv64-linux-gnu/libcheck.a /usr/lib/riscv64-linux-gnu/libbz2.so /usr/lib/riscv64-linux-gnu/libxml2.so /usr/lib/riscv64-linux-gnu/libz.so -lm -pthread -lrt -lsubunit make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 81%] Built target test_render_validator make -f src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/build.make src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/annotation/test /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/DependInfo.cmake "--color=" test_sbml_annotation make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/build.make src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestCopyAndClone.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestCopyAndClone.cpp.o -MF CMakeFiles/test_sbml_annotation.dir/TestCopyAndClone.cpp.o.d -o CMakeFiles/test_sbml_annotation.dir/TestCopyAndClone.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestCopyAndClone.cpp [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestL3ModelHistory.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestL3ModelHistory.cpp.o -MF CMakeFiles/test_sbml_annotation.dir/TestL3ModelHistory.cpp.o.d -o CMakeFiles/test_sbml_annotation.dir/TestL3ModelHistory.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestL3ModelHistory.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestL3ModelHistory.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation.cpp.o -MF CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation.cpp.o.d -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestRDFAnnotation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestRDFAnnotation.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation2.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation2.cpp.o -MF CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation2.cpp.o.d -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation2.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestRDFAnnotation2.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestRDFAnnotation2.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestRDFAnnotation2.cpp:55: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestRDFAnnotation2.cpp: In function ‘void test_RDFAnnotation2_modelWithHistoryAndCVTerms_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestRDFAnnotation2.cpp:225:10: warning: too many arguments for format [-Wformat-extra-args] 225 | fail("parseModelHistory failed"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationMetaid.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationMetaid.cpp.o -MF CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationMetaid.cpp.o.d -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationMetaid.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestRDFAnnotationMetaid.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestRDFAnnotationMetaid.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationNestedCVTerms.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationNestedCVTerms.cpp.o -MF CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationNestedCVTerms.cpp.o.d -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationNestedCVTerms.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestRDFAnnotationNestedCVTerms.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestRDFAnnotationNestedCVTerms.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationVCard4.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationVCard4.cpp.o -MF CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationVCard4.cpp.o.d -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationVCard4.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestRDFAnnotationVCard4.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestRDFAnnotationVCard4.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestRDFAnnotationVCard4.cpp:55: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestRDFAnnotationVCard4.cpp: In function ‘void test_RDFAnnotationV4_modelWithHistoryAndCVTerms_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestRDFAnnotationVCard4.cpp:232:10: warning: too many arguments for format [-Wformat-extra-args] 232 | fail("parseModelHistory failed"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestRDFAnnotationVCard4.cpp: In function ‘void test_RDFAnnotationV4_modelWithHistoryAndCVTerms_31_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestRDFAnnotationVCard4.cpp:478:10: warning: too many arguments for format [-Wformat-extra-args] 478 | fail("parseModelHistory failed"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestSyncAnnotation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestSyncAnnotation.cpp.o -MF CMakeFiles/test_sbml_annotation.dir/TestSyncAnnotation.cpp.o.d -o CMakeFiles/test_sbml_annotation.dir/TestSyncAnnotation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestSyncAnnotation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestSyncAnnotation.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestUnusualRDFAnnotation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestUnusualRDFAnnotation.cpp.o -MF CMakeFiles/test_sbml_annotation.dir/TestUnusualRDFAnnotation.cpp.o.d -o CMakeFiles/test_sbml_annotation.dir/TestUnusualRDFAnnotation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestUnusualRDFAnnotation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestUnusualRDFAnnotation.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestValidation.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestValidation.cpp.o -MF CMakeFiles/test_sbml_annotation.dir/TestValidation.cpp.o.d -o CMakeFiles/test_sbml_annotation.dir/TestValidation.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestValidation.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestValidation.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestCVTerms.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestCVTerms.c.o -MF CMakeFiles/test_sbml_annotation.dir/TestCVTerms.c.o.d -o CMakeFiles/test_sbml_annotation.dir/TestCVTerms.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestCVTerms.c [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestCVTerms_newSetters.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestCVTerms_newSetters.c.o -MF CMakeFiles/test_sbml_annotation.dir/TestCVTerms_newSetters.c.o.d -o CMakeFiles/test_sbml_annotation.dir/TestCVTerms_newSetters.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestCVTerms_newSetters.c [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestDate_newSetters.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestDate_newSetters.c.o -MF CMakeFiles/test_sbml_annotation.dir/TestDate_newSetters.c.o.d -o CMakeFiles/test_sbml_annotation.dir/TestDate_newSetters.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestDate_newSetters.c [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestModelCreator_newSetters.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestModelCreator_newSetters.c.o -MF CMakeFiles/test_sbml_annotation.dir/TestModelCreator_newSetters.c.o.d -o CMakeFiles/test_sbml_annotation.dir/TestModelCreator_newSetters.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestModelCreator_newSetters.c [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestModelHistory.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestModelHistory.c.o -MF CMakeFiles/test_sbml_annotation.dir/TestModelHistory.c.o.d -o CMakeFiles/test_sbml_annotation.dir/TestModelHistory.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestModelHistory.c [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestModelHistory_newSetters.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestModelHistory_newSetters.c.o -MF CMakeFiles/test_sbml_annotation.dir/TestModelHistory_newSetters.c.o.d -o CMakeFiles/test_sbml_annotation.dir/TestModelHistory_newSetters.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestModelHistory_newSetters.c [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationC.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationC.c.o -MF CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationC.c.o.d -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationC.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestRDFAnnotationC.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestRDFAnnotationC.c:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRunner.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRunner.c.o -MF CMakeFiles/test_sbml_annotation.dir/TestRunner.c.o.d -o CMakeFiles/test_sbml_annotation.dir/TestRunner.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/annotation/test/TestRunner.c [ 82%] Linking CXX executable test_sbml_annotation cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/annotation/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_annotation.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test_sbml_annotation.dir/link.d CMakeFiles/test_sbml_annotation.dir/TestCopyAndClone.cpp.o CMakeFiles/test_sbml_annotation.dir/TestL3ModelHistory.cpp.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation.cpp.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation2.cpp.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationMetaid.cpp.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationNestedCVTerms.cpp.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationVCard4.cpp.o CMakeFiles/test_sbml_annotation.dir/TestSyncAnnotation.cpp.o CMakeFiles/test_sbml_annotation.dir/TestUnusualRDFAnnotation.cpp.o CMakeFiles/test_sbml_annotation.dir/TestValidation.cpp.o CMakeFiles/test_sbml_annotation.dir/TestCVTerms.c.o CMakeFiles/test_sbml_annotation.dir/TestCVTerms_newSetters.c.o CMakeFiles/test_sbml_annotation.dir/TestDate_newSetters.c.o CMakeFiles/test_sbml_annotation.dir/TestModelCreator_newSetters.c.o CMakeFiles/test_sbml_annotation.dir/TestModelHistory.c.o CMakeFiles/test_sbml_annotation.dir/TestModelHistory_newSetters.c.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationC.c.o CMakeFiles/test_sbml_annotation.dir/TestRunner.c.o -o test_sbml_annotation ../../../libsbml-static.a /usr/lib/riscv64-linux-gnu/libcheck.a /usr/lib/riscv64-linux-gnu/libbz2.so /usr/lib/riscv64-linux-gnu/libxml2.so /usr/lib/riscv64-linux-gnu/libz.so -lm -pthread -lrt -lsubunit make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 82%] Built target test_sbml_annotation make -f src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/build.make src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/conversion/test /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/DependInfo.cmake "--color=" test_sbml_conversion make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/build.make src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 82%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestConversionOption.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestConversionOption.cpp.o -MF CMakeFiles/test_sbml_conversion.dir/TestConversionOption.cpp.o.d -o CMakeFiles/test_sbml_conversion.dir/TestConversionOption.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestConversionOption.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestConversionOption.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 82%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestConversionProperties.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestConversionProperties.cpp.o -MF CMakeFiles/test_sbml_conversion.dir/TestConversionProperties.cpp.o.d -o CMakeFiles/test_sbml_conversion.dir/TestConversionProperties.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestConversionProperties.cpp [ 82%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestInferUnitsConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestInferUnitsConverter.cpp.o -MF CMakeFiles/test_sbml_conversion.dir/TestInferUnitsConverter.cpp.o.d -o CMakeFiles/test_sbml_conversion.dir/TestInferUnitsConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestInferUnitsConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestInferUnitsConverter.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 82%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestLevelVersionConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestLevelVersionConverter.cpp.o -MF CMakeFiles/test_sbml_conversion.dir/TestLevelVersionConverter.cpp.o.d -o CMakeFiles/test_sbml_conversion.dir/TestLevelVersionConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestLevelVersionConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestLevelVersionConverter.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 83%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestRateOfConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestRateOfConverter.cpp.o -MF CMakeFiles/test_sbml_conversion.dir/TestRateOfConverter.cpp.o.d -o CMakeFiles/test_sbml_conversion.dir/TestRateOfConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestRateOfConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestRateOfConverter.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 83%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestSBMLConverterRegistry.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestSBMLConverterRegistry.cpp.o -MF CMakeFiles/test_sbml_conversion.dir/TestSBMLConverterRegistry.cpp.o.d -o CMakeFiles/test_sbml_conversion.dir/TestSBMLConverterRegistry.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestSBMLConverterRegistry.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverter.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/SBMLConverterRegistry.h:70, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestSBMLConverterRegistry.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 83%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestSBMLRateRuleConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestSBMLRateRuleConverter.cpp.o -MF CMakeFiles/test_sbml_conversion.dir/TestSBMLRateRuleConverter.cpp.o.d -o CMakeFiles/test_sbml_conversion.dir/TestSBMLRateRuleConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestSBMLRateRuleConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestSBMLRateRuleConverter.cpp:37: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestSBMLRateRuleConverter.cpp: In function ‘void test_crash_converter_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestSBMLRateRuleConverter.cpp:254:13: warning: unused variable ‘rr2’ [-Wunused-variable] 254 | RateRule* rr2 = model->createRateRule(); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestSBMLRateRuleConverter.cpp: In function ‘void test_conversion_raterule_converter_hidden_variable_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestSBMLRateRuleConverter.cpp:368:20: warning: unused variable ‘mpf’ [-Wunused-variable] 368 | Parameter* mpf = setupZeroParameter(model, "MPF", false); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestSBMLRateRuleConverter.cpp:369:20: warning: unused variable ‘cdc25’ [-Wunused-variable] 369 | Parameter* cdc25 = setupZeroParameter(model, "Cdc25", false); | ^~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestSBMLRateRuleConverter.cpp:370:20: warning: unused variable ‘wee1’ [-Wunused-variable] 370 | Parameter* wee1 = setupZeroParameter(model, "Wee1", false); | ^~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestSBMLRateRuleConverter.cpp:371:20: warning: unused variable ‘clock’ [-Wunused-variable] 371 | Parameter* clock = setupZeroParameter(model, "Clock", false); | ^~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestSBMLRateRuleConverter.cpp:374:20: warning: unused variable ‘c’ [-Wunused-variable] 374 | Parameter* c = setupZeroParameter(model, "c", true); | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestSBMLRateRuleConverter.cpp:375:20: warning: unused variable ‘k1’ [-Wunused-variable] 375 | Parameter* k1 = setupZeroParameter(model, "k1", true); | ^~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestSBMLRateRuleConverter.cpp:376:20: warning: unused variable ‘k2’ [-Wunused-variable] 376 | Parameter* k2 = setupZeroParameter(model, "k2", true); | ^~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestSBMLRateRuleConverter.cpp:377:20: warning: unused variable ‘k3’ [-Wunused-variable] 377 | Parameter* k3 = setupZeroParameter(model, "k3", true); | ^~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestSBMLRateRuleConverter.cpp:378:20: warning: unused variable ‘k4’ [-Wunused-variable] 378 | Parameter* k4 = setupZeroParameter(model, "k4", true); | ^~ [ 83%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestSBMLRuleConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestSBMLRuleConverter.cpp.o -MF CMakeFiles/test_sbml_conversion.dir/TestSBMLRuleConverter.cpp.o.d -o CMakeFiles/test_sbml_conversion.dir/TestSBMLRuleConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestSBMLRuleConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestSBMLRuleConverter.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 83%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestStripPackageConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestStripPackageConverter.cpp.o -MF CMakeFiles/test_sbml_conversion.dir/TestStripPackageConverter.cpp.o.d -o CMakeFiles/test_sbml_conversion.dir/TestStripPackageConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestStripPackageConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestStripPackageConverter.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 83%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter.cpp.o -MF CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter.cpp.o.d -o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestUnitsConverter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestUnitsConverter.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 83%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter2.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter2.cpp.o -MF CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter2.cpp.o.d -o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter2.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestUnitsConverter2.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestUnitsConverter2.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 83%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestUnitsConverterL2.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestUnitsConverterL2.cpp.o -MF CMakeFiles/test_sbml_conversion.dir/TestUnitsConverterL2.cpp.o.d -o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverterL2.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestUnitsConverterL2.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestUnitsConverterL2.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 83%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestRunner.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestRunner.c.o -MF CMakeFiles/test_sbml_conversion.dir/TestRunner.c.o.d -o CMakeFiles/test_sbml_conversion.dir/TestRunner.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/conversion/test/TestRunner.c [ 83%] Linking CXX executable test_sbml_conversion cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/conversion/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_conversion.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test_sbml_conversion.dir/link.d CMakeFiles/test_sbml_conversion.dir/TestConversionOption.cpp.o CMakeFiles/test_sbml_conversion.dir/TestConversionProperties.cpp.o CMakeFiles/test_sbml_conversion.dir/TestInferUnitsConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestLevelVersionConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestRateOfConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestSBMLConverterRegistry.cpp.o CMakeFiles/test_sbml_conversion.dir/TestSBMLRateRuleConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestSBMLRuleConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestStripPackageConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter2.cpp.o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverterL2.cpp.o CMakeFiles/test_sbml_conversion.dir/TestRunner.c.o -o test_sbml_conversion ../../../libsbml-static.a /usr/lib/riscv64-linux-gnu/libcheck.a /usr/lib/riscv64-linux-gnu/libbz2.so /usr/lib/riscv64-linux-gnu/libxml2.so /usr/lib/riscv64-linux-gnu/libz.so -lm -pthread -lrt -lsubunit make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 83%] Built target test_sbml_conversion make -f src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/build.make src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/test /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/extension/test /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/DependInfo.cmake "--color=" test_sbml_extension make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/build.make src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 83%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestPackage.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestPackage.cpp.o -MF CMakeFiles/test_sbml_extension.dir/TestPackage.cpp.o.d -o CMakeFiles/test_sbml_extension.dir/TestPackage.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/test/TestPackage.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtensionRegister.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/test/TestPackage.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 83%] Building C object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestRunner.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/extension/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestRunner.c.o -MF CMakeFiles/test_sbml_extension.dir/TestRunner.c.o.d -o CMakeFiles/test_sbml_extension.dir/TestRunner.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/test/TestRunner.c [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBMLDocumentPlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBMLDocumentPlugin.cpp.o -MF CMakeFiles/test_sbml_extension.dir/TestSBMLDocumentPlugin.cpp.o.d -o CMakeFiles/test_sbml_extension.dir/TestSBMLDocumentPlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/test/TestSBMLDocumentPlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/test/TestSBMLDocumentPlugin.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBMLExtension.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBMLExtension.cpp.o -MF CMakeFiles/test_sbml_extension.dir/TestSBMLExtension.cpp.o.d -o CMakeFiles/test_sbml_extension.dir/TestSBMLExtension.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/test/TestSBMLExtension.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/test/TestSBMLExtension.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:306: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:42, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/test/TestSBMLExtension.cpp:62: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common/CompExtensionTypes.h:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionNamespaces.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionNamespaces.cpp.o -MF CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionNamespaces.cpp.o.d -o CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionNamespaces.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/test/TestSBMLExtensionNamespaces.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/test/TestSBMLExtensionNamespaces.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionRegistry.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionRegistry.cpp.o -MF CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionRegistry.cpp.o.d -o CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionRegistry.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/test/TestSBMLExtensionRegistry.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/test/TestSBMLExtensionRegistry.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBaseExtensionPoint.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBaseExtensionPoint.cpp.o -MF CMakeFiles/test_sbml_extension.dir/TestSBaseExtensionPoint.cpp.o.d -o CMakeFiles/test_sbml_extension.dir/TestSBaseExtensionPoint.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/test/TestSBaseExtensionPoint.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/test/TestSBaseExtensionPoint.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBasePlugin.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBasePlugin.cpp.o -MF CMakeFiles/test_sbml_extension.dir/TestSBasePlugin.cpp.o.d -o CMakeFiles/test_sbml_extension.dir/TestSBasePlugin.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/test/TestSBasePlugin.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/test/TestSBasePlugin.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreator.cpp.o -MF CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreator.cpp.o.d -o CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/test/TestSBasePluginCreator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/test/TestSBasePluginCreator.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreatorBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreatorBase.cpp.o -MF CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreatorBase.cpp.o.d -o CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreatorBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/test/TestSBasePluginCreatorBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBasePluginCreatorBase.h:57, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/SBMLExtension.h:143, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/test/TestSBasePluginCreatorBase.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestUnknownPackage.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestUnknownPackage.cpp.o -MF CMakeFiles/test_sbml_extension.dir/TestUnknownPackage.cpp.o.d -o CMakeFiles/test_sbml_extension.dir/TestUnknownPackage.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/test/TestUnknownPackage.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/test/TestUnknownPackage.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 84%] Linking CXX executable test_sbml_extension cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_extension.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test_sbml_extension.dir/link.d CMakeFiles/test_sbml_extension.dir/TestPackage.cpp.o CMakeFiles/test_sbml_extension.dir/TestRunner.c.o CMakeFiles/test_sbml_extension.dir/TestSBMLDocumentPlugin.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBMLExtension.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionNamespaces.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionRegistry.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBaseExtensionPoint.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBasePlugin.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreator.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreatorBase.cpp.o CMakeFiles/test_sbml_extension.dir/TestUnknownPackage.cpp.o -o test_sbml_extension ../../../libsbml-static.a /usr/lib/riscv64-linux-gnu/libcheck.a /usr/lib/riscv64-linux-gnu/libbz2.so /usr/lib/riscv64-linux-gnu/libxml2.so /usr/lib/riscv64-linux-gnu/libz.so -lm -pthread -lrt -lsubunit make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 84%] Built target test_sbml_extension make -f src/sbml/math/test/CMakeFiles/test_sbml_math.dir/build.make src/sbml/math/test/CMakeFiles/test_sbml_math.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/math/test /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/math/test/CMakeFiles/test_sbml_math.dir/DependInfo.cmake "--color=" test_sbml_math make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/sbml/math/test/CMakeFiles/test_sbml_math.dir/build.make src/sbml/math/test/CMakeFiles/test_sbml_math.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 84%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestChildFunctions.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestChildFunctions.cpp.o -MF CMakeFiles/test_sbml_math.dir/TestChildFunctions.cpp.o.d -o CMakeFiles/test_sbml_math.dir/TestChildFunctions.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestChildFunctions.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestChildFunctions.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestDerivativeFunctions.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestDerivativeFunctions.cpp.o -MF CMakeFiles/test_sbml_math.dir/TestDerivativeFunctions.cpp.o.d -o CMakeFiles/test_sbml_math.dir/TestDerivativeFunctions.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestDerivativeFunctions.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestDerivativeFunctions.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestGetValue.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestGetValue.cpp.o -MF CMakeFiles/test_sbml_math.dir/TestGetValue.cpp.o.d -o CMakeFiles/test_sbml_math.dir/TestGetValue.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestGetValue.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestGetValue.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestInferRnFunctions.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestInferRnFunctions.cpp.o -MF CMakeFiles/test_sbml_math.dir/TestInferRnFunctions.cpp.o.d -o CMakeFiles/test_sbml_math.dir/TestInferRnFunctions.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestInferRnFunctions.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestInferRnFunctions.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestL3FormulaParser.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestL3FormulaParser.cpp.o -MF CMakeFiles/test_sbml_math.dir/TestL3FormulaParser.cpp.o.d -o CMakeFiles/test_sbml_math.dir/TestL3FormulaParser.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestL3FormulaParser.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/L3Parser.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestL3FormulaParser.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestReadFromFile1.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestReadFromFile1.cpp.o -MF CMakeFiles/test_sbml_math.dir/TestReadFromFile1.cpp.o.d -o CMakeFiles/test_sbml_math.dir/TestReadFromFile1.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestReadFromFile1.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestReadFromFile1.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestReadFromFile1.cpp:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestReadFromFile1.cpp: In function ‘void test_read_MathML_1_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestReadFromFile1.cpp:103:10: warning: too many arguments for format [-Wformat-extra-args] 103 | fail("readSBML(\"mathML_1-invalid.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestReadFromFile2.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestReadFromFile2.cpp.o -MF CMakeFiles/test_sbml_math.dir/TestReadFromFile2.cpp.o.d -o CMakeFiles/test_sbml_math.dir/TestReadFromFile2.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestReadFromFile2.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestReadFromFile2.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestReadFromFile2.cpp:54: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestReadFromFile2.cpp: In function ‘void test_read_MathML_2_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestReadFromFile2.cpp:83:10: warning: too many arguments for format [-Wformat-extra-args] 83 | fail("readSBML(\"mathML_2-invalid.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestReadFromFileL3V2.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestReadFromFileL3V2.cpp.o -MF CMakeFiles/test_sbml_math.dir/TestReadFromFileL3V2.cpp.o.d -o CMakeFiles/test_sbml_math.dir/TestReadFromFileL3V2.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestReadFromFileL3V2.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestReadFromFileL3V2.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestReadFromFileL3V2.cpp:54: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestReadFromFileL3V2.cpp: In function ‘void test_read_MathML_L3V2_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestReadFromFileL3V2.cpp:96:10: warning: too many arguments for format [-Wformat-extra-args] 96 | fail("readSBML(\"L3V2Math.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestReadMathML.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestReadMathML.cpp.o -MF CMakeFiles/test_sbml_math.dir/TestReadMathML.cpp.o.d -o CMakeFiles/test_sbml_math.dir/TestReadMathML.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestReadMathML.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestReadMathML.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestReadMathML.cpp:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestReadMathML.cpp:1539:13: warning: ‘test_element_implies’ defined but not used [-Wunused-variable] 1539 | START_TEST (test_element_implies) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestReadMathML.cpp:1520:13: warning: ‘test_element_rem’ defined but not used [-Wunused-variable] 1520 | START_TEST (test_element_rem) | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestReadMathML.cpp:1501:13: warning: ‘test_element_quotient’ defined but not used [-Wunused-variable] 1501 | START_TEST (test_element_quotient) | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestReadMathML.cpp:1482:13: warning: ‘test_element_min’ defined but not used [-Wunused-variable] 1482 | START_TEST (test_element_min) | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestReadMathML.cpp:1463:13: warning: ‘test_element_max’ defined but not used [-Wunused-variable] 1463 | START_TEST (test_element_max) | ^~~~~~~~~~~~~~~~ [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestValidASTNode.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestValidASTNode.cpp.o -MF CMakeFiles/test_sbml_math.dir/TestValidASTNode.cpp.o.d -o CMakeFiles/test_sbml_math.dir/TestValidASTNode.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestValidASTNode.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestValidASTNode.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestValidASTNode.cpp: In function ‘void test_ValidASTNode_Number_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestValidASTNode.cpp:174:7: warning: unused variable ‘i’ [-Wunused-variable] 174 | int i = n->addChild(d); | ^ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestValidASTNode.cpp: In function ‘void test_ValidASTNode_Name_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestValidASTNode.cpp:190:7: warning: unused variable ‘i’ [-Wunused-variable] 190 | int i = n->addChild(d); | ^ [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestWriteMathML.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestWriteMathML.cpp.o -MF CMakeFiles/test_sbml_math.dir/TestWriteMathML.cpp.o.d -o CMakeFiles/test_sbml_math.dir/TestWriteMathML.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestWriteMathML.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestWriteMathML.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestWriteMathMLFromAST.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestWriteMathMLFromAST.cpp.o -MF CMakeFiles/test_sbml_math.dir/TestWriteMathMLFromAST.cpp.o.d -o CMakeFiles/test_sbml_math.dir/TestWriteMathMLFromAST.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestWriteMathMLFromAST.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestWriteMathMLFromAST.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestASTNode.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestASTNode.c.o -MF CMakeFiles/test_sbml_math.dir/TestASTNode.c.o.d -o CMakeFiles/test_sbml_math.dir/TestASTNode.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestASTNode.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestASTNode.c:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestASTNode.c:55: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestASTNode.c: In function ‘void test_ASTNode_setName_1_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestASTNode.c:1513:10: warning: too many arguments for format [-Wformat-extra-args] 1513 | fail("ASTNode_setName(...) did not make a copy of name."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestASTNode.c:1521:10: warning: too many arguments for format [-Wformat-extra-args] 1521 | fail("ASTNode_setName(node, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestFormulaFormatter.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestFormulaFormatter.c.o -MF CMakeFiles/test_sbml_math.dir/TestFormulaFormatter.c.o.d -o CMakeFiles/test_sbml_math.dir/TestFormulaFormatter.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestFormulaFormatter.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestFormulaFormatter.c:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestFormulaParser.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestFormulaParser.c.o -MF CMakeFiles/test_sbml_math.dir/TestFormulaParser.c.o.d -o CMakeFiles/test_sbml_math.dir/TestFormulaParser.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestFormulaParser.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestFormulaParser.c:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestFormulaTokenizer.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestFormulaTokenizer.c.o -MF CMakeFiles/test_sbml_math.dir/TestFormulaTokenizer.c.o.d -o CMakeFiles/test_sbml_math.dir/TestFormulaTokenizer.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestFormulaTokenizer.c [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestL3FormulaFormatter.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestL3FormulaFormatter.c.o -MF CMakeFiles/test_sbml_math.dir/TestL3FormulaFormatter.c.o.d -o CMakeFiles/test_sbml_math.dir/TestL3FormulaFormatter.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestL3FormulaFormatter.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/L3FormulaFormatter.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestL3FormulaFormatter.c:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestL3FormulaParserC.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestL3FormulaParserC.c.o -MF CMakeFiles/test_sbml_math.dir/TestL3FormulaParserC.c.o.d -o CMakeFiles/test_sbml_math.dir/TestL3FormulaParserC.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestL3FormulaParserC.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestL3FormulaParserC.c:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestRunner.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestRunner.c.o -MF CMakeFiles/test_sbml_math.dir/TestRunner.c.o.d -o CMakeFiles/test_sbml_math.dir/TestRunner.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/test/TestRunner.c [ 86%] Linking CXX executable test_sbml_math cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/math/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_math.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test_sbml_math.dir/link.d CMakeFiles/test_sbml_math.dir/TestChildFunctions.cpp.o CMakeFiles/test_sbml_math.dir/TestDerivativeFunctions.cpp.o CMakeFiles/test_sbml_math.dir/TestGetValue.cpp.o CMakeFiles/test_sbml_math.dir/TestInferRnFunctions.cpp.o CMakeFiles/test_sbml_math.dir/TestL3FormulaParser.cpp.o CMakeFiles/test_sbml_math.dir/TestReadFromFile1.cpp.o CMakeFiles/test_sbml_math.dir/TestReadFromFile2.cpp.o CMakeFiles/test_sbml_math.dir/TestReadFromFileL3V2.cpp.o CMakeFiles/test_sbml_math.dir/TestReadMathML.cpp.o CMakeFiles/test_sbml_math.dir/TestValidASTNode.cpp.o CMakeFiles/test_sbml_math.dir/TestWriteMathML.cpp.o CMakeFiles/test_sbml_math.dir/TestWriteMathMLFromAST.cpp.o CMakeFiles/test_sbml_math.dir/TestASTNode.c.o CMakeFiles/test_sbml_math.dir/TestFormulaFormatter.c.o CMakeFiles/test_sbml_math.dir/TestFormulaParser.c.o CMakeFiles/test_sbml_math.dir/TestFormulaTokenizer.c.o CMakeFiles/test_sbml_math.dir/TestL3FormulaFormatter.c.o CMakeFiles/test_sbml_math.dir/TestL3FormulaParserC.c.o CMakeFiles/test_sbml_math.dir/TestRunner.c.o -o test_sbml_math ../../../libsbml-static.a /usr/lib/riscv64-linux-gnu/libcheck.a /usr/lib/riscv64-linux-gnu/libbz2.so /usr/lib/riscv64-linux-gnu/libxml2.so /usr/lib/riscv64-linux-gnu/libz.so -lm -pthread -lrt -lsubunit make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 86%] Built target test_sbml_math make -f src/sbml/test/CMakeFiles/test_sbml_sbml.dir/build.make src/sbml/test/CMakeFiles/test_sbml_sbml.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test/CMakeFiles/test_sbml_sbml.dir/DependInfo.cmake "--color=" test_sbml_sbml make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/sbml/test/CMakeFiles/test_sbml_sbml.dir/build.make src/sbml/test/CMakeFiles/test_sbml_sbml.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 86%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAncestor.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAncestor.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestAncestor.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestAncestor.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestAncestor.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestAncestor.cpp:55: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 86%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAttributeFunctions.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAttributeFunctions.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestAttributeFunctions.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestAttributeFunctions.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestAttributeFunctions.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestAttributeFunctions.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestAttributeFunctions.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestAttributeFunctions.cpp: In function ‘void AttributeTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestAttributeFunctions.cpp:77:10: warning: too many arguments for format [-Wformat-extra-args] 77 | fail("'new(std::nothrow) SBase;' returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestAttributeFunctions.cpp: At global scope: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestAttributeFunctions.cpp:1353:13: warning: ‘test_Attributes_Trigger_Id’ defined but not used [-Wunused-variable] 1353 | START_TEST (test_Attributes_Trigger_Id) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 86%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestConsistencyChecks.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestConsistencyChecks.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestConsistencyChecks.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestConsistencyChecks.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConsistencyChecks.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConsistencyChecks.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConsistencyChecks.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConsistencyChecks.cpp: In function ‘void test_consistency_checks_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConsistencyChecks.cpp:73:10: warning: too many arguments for format [-Wformat-extra-args] 73 | fail("readSBML(\"inconsistent.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConsistencyChecks.cpp: In function ‘void test_strict_unit_consistency_checks_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConsistencyChecks.cpp:138:10: warning: too many arguments for format [-Wformat-extra-args] 138 | fail("readSBML(\"l3v1-units.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConsistencyChecks.cpp: In function ‘void test_check_consistency_settings_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConsistencyChecks.cpp:181:10: warning: too many arguments for format [-Wformat-extra-args] 181 | fail("readSBML(\"l3v1-units.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 86%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCopyAndClone.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCopyAndClone.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestCopyAndClone.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestCopyAndClone.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCopyAndClone.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCopyAndClone.cpp:55: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 86%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestGetMultipleObjects.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestGetMultipleObjects.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestGetMultipleObjects.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestGetMultipleObjects.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestGetMultipleObjects.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestGetMultipleObjects.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestGetMultipleObjects.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestGetMultipleObjects.cpp: In function ‘void test_GetMultipleObjects_getId_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestGetMultipleObjects.cpp:74:10: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("readSBML(\"multiple-ids.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestGetMultipleObjects.cpp: In function ‘void test_GetMultipleObjects_getMetaId_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestGetMultipleObjects.cpp:169:10: warning: too many arguments for format [-Wformat-extra-args] 169 | fail("readSBML(\"multiple-ids.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestGetMultipleObjects.cpp: In function ‘void test_GetMultipleObjects_noLocalParameters_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestGetMultipleObjects.cpp:350:10: warning: too many arguments for format [-Wformat-extra-args] 350 | fail("readSBML(\"multiple-ids.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestGetMultipleObjects.cpp: In function ‘void test_GetMultipleObjects_noUnits_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestGetMultipleObjects.cpp:380:10: warning: too many arguments for format [-Wformat-extra-args] 380 | fail("readSBML(\"multiple-ids.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestGetMultipleObjects.cpp: In function ‘void test_GetMultipleObjects_noAssignments_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestGetMultipleObjects.cpp:408:10: warning: too many arguments for format [-Wformat-extra-args] 408 | fail("readSBML(\"assignments-invalid.xml\") returned an empty model."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestGetMultipleObjects.cpp: In function ‘void test_GetMultipleObjects_allElements_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestGetMultipleObjects.cpp:454:10: warning: too many arguments for format [-Wformat-extra-args] 454 | fail("readSBML(\"multiple-ids.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestGetMultipleObjects.cpp: In function ‘void test_GetMultipleObjects_withFilter_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestGetMultipleObjects.cpp:490:10: warning: too many arguments for format [-Wformat-extra-args] 490 | fail("readSBML(\"multiple-ids.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 86%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestInternalConsistencyChecks.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestInternalConsistencyChecks.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestInternalConsistencyChecks.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestInternalConsistencyChecks.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestInternalConsistencyChecks.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestInternalConsistencyChecks.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 87%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestLevelCompatibility.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestLevelCompatibility.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestLevelCompatibility.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestLevelCompatibility.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestLevelCompatibility.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestLevelCompatibility.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestLevelCompatibility.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestLevelCompatibility.cpp: In function ‘void test_LevelCompatibility_unit_fails_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestLevelCompatibility.cpp:73:10: warning: too many arguments for format [-Wformat-extra-args] 73 | fail("readSBML(\"inconsistent-l2v1-units.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestLevelCompatibility.cpp: In function ‘void test_LevelCompatibility_unit_warnings_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestLevelCompatibility.cpp:107:10: warning: too many arguments for format [-Wformat-extra-args] 107 | fail("readSBML(\"inconsistent-l2v1-units-2.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestLevelCompatibility.cpp: In function ‘void test_LevelCompatibility_unit_fails_l1_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestLevelCompatibility.cpp:138:10: warning: too many arguments for format [-Wformat-extra-args] 138 | fail("readSBML(\"inconsistent-l2v1-units.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestLevelCompatibility.cpp: In function ‘void test_LevelCompatibility_unit_warnings_l1_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestLevelCompatibility.cpp:172:10: warning: too many arguments for format [-Wformat-extra-args] 172 | fail("readSBML(\"inconsistent-l2v1-units-2.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestLevelCompatibility.cpp: In function ‘void test_LevelCompatibility_unit_fails_l2v2_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestLevelCompatibility.cpp:203:10: warning: too many arguments for format [-Wformat-extra-args] 203 | fail("readSBML(\"inconsistent-l2v1-units.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestLevelCompatibility.cpp: In function ‘void test_LevelCompatibility_unit_fails_l2v3_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestLevelCompatibility.cpp:237:10: warning: too many arguments for format [-Wformat-extra-args] 237 | fail("readSBML(\"inconsistent-l2v1-units.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile5.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile5.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFile5.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile5.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile5.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile5.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile5.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile5.cpp: In function ‘void test_read_l2v1_assignment_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile5.cpp:91:10: warning: too many arguments for format [-Wformat-extra-args] 91 | fail("readSBML(\"l2v1-assignment.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile6.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile6.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFile6.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile6.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile6.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile6.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile6.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile6.cpp: In function ‘void test_read_l2v2_newComponents_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile6.cpp:96:10: warning: too many arguments for format [-Wformat-extra-args] 96 | fail("readSBML(\"l2v2-newComponents.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile7.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile7.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFile7.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile7.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile7.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile7.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile7.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile7.cpp: In function ‘void test_read_l2v3_all_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile7.cpp:111:10: warning: too many arguments for format [-Wformat-extra-args] 111 | fail("readSBML(\"l2v3-all.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile8.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile8.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFile8.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile8.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile8.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile8.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile8.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile8.cpp: In function ‘void test_read_exploit_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile8.cpp:74:10: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("readSBML(\"exploit.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile8.cpp: In function ‘void test_read_l2v4_new_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile8.cpp:105:10: warning: too many arguments for format [-Wformat-extra-args] 105 | fail("readSBML(\"l2v4-new.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile9.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile9.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFile9.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile9.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile9.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile9.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile9.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile9.cpp: In function ‘void test_read_l3v1_new_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile9.cpp:87:10: warning: too many arguments for format [-Wformat-extra-args] 87 | fail("readSBML(\"l3v1-new-invalid.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL2V5.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL2V5.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL2V5.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL2V5.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL2V5.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL2V5.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL2V5.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL2V5.cpp: In function ‘void test_read_l2v5_all_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL2V5.cpp:111:10: warning: too many arguments for format [-Wformat-extra-args] 111 | fail("readSBML(\"l2v5-all.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL2V5.cpp: In function ‘void test_echo_l2v5_all_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL2V5.cpp:590:10: warning: too many arguments for format [-Wformat-extra-args] 590 | fail("readSBML(\"l2v5-all.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2.cpp: In function ‘void test_read_l3v2_all_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2.cpp:102:10: warning: too many arguments for format [-Wformat-extra-args] 102 | fail("readSBML(\"l3v2-all.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2.cpp: In function ‘void test_echo_l3v2_all_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2.cpp:585:10: warning: too many arguments for format [-Wformat-extra-args] 585 | fail("readSBML(\"l3v2-all.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_1.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_1.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_1.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_1.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_1.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_1.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_1.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_1.cpp: In function ‘void test_read_l3v2_no_model_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_1.cpp:87:10: warning: too many arguments for format [-Wformat-extra-args] 87 | fail("readSBML(\"l3v2-no-model.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_1.cpp: In function ‘void test_echo_l3v2_no_model_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_1.cpp:124:10: warning: too many arguments for format [-Wformat-extra-args] 124 | fail("readSBML(\"l3v2-no-model.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_2.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_2.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_2.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_2.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_2.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_2.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_2.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_2.cpp: In function ‘void test_read_l3v2_empty_lo_1_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_2.cpp:85:10: warning: too many arguments for format [-Wformat-extra-args] 85 | fail("readSBML(\"l3v2-empty-lo-1.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_2.cpp: In function ‘void test_echo_l3v2_empty_lo_1_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_2.cpp:209:10: warning: too many arguments for format [-Wformat-extra-args] 209 | fail("readSBML(\"l3v2-empty-lo-1.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_2.cpp: In function ‘void test_echo_l3v2_empty_lo_3_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_2.cpp:330:10: warning: too many arguments for format [-Wformat-extra-args] 330 | fail("readSBML(\"l3v2-empty-lo-3.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_3.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_3.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_3.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_3.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_3.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_3.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_3.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_3.cpp: In function ‘void test_read_l3v2_empty_lo_2_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_3.cpp:86:10: warning: too many arguments for format [-Wformat-extra-args] 86 | fail("readSBML(\"l3v2-empty-lo-2.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_3.cpp: In function ‘void test_echo_l3v2_empty_lo_2_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_3.cpp:245:10: warning: too many arguments for format [-Wformat-extra-args] 245 | fail("readSBML(\"l3v2-empty-lo-2.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_4.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_4.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_4.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_4.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_4.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_4.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_4.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_4.cpp: In function ‘void test_read_l3v2_empty_math_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_4.cpp:86:10: warning: too many arguments for format [-Wformat-extra-args] 86 | fail("readSBML(\"l3v2-empty-lo-3.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_4.cpp: In function ‘void test_echo_l3v2_empty_math_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_4.cpp:180:10: warning: too many arguments for format [-Wformat-extra-args] 180 | fail("readSBML(\"l3v2-empty-math.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_5.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_5.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_5.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_5.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_5.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_5.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_5.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_5.cpp: In function ‘void test_read_l3v2_empty_event_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_5.cpp:86:10: warning: too many arguments for format [-Wformat-extra-args] 86 | fail("readSBML(\"l3v2-empty-event.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_5.cpp: In function ‘void test_echo_l3v2_empty_event_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_5.cpp:173:10: warning: too many arguments for format [-Wformat-extra-args] 173 | fail("readSBML(\"l3v2-empty-event.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_6.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_6.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_6.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_6.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_6.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_6.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_6.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_6.cpp: In function ‘void test_read_l3v2_empty_event2_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_6.cpp:86:10: warning: too many arguments for format [-Wformat-extra-args] 86 | fail("readSBML(\"l3v2-empty-event2.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_6.cpp: In function ‘void test_echo_l3v2_empty_event2_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFileL3V2_6.cpp:150:10: warning: too many arguments for format [-Wformat-extra-args] 150 | fail("readSBML(\"l3v2-empty-event2.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadSBML.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadSBML.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadSBML.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadSBML.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadSBML.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadSBML.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRemoveFromParent.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRemoveFromParent.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestRemoveFromParent.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestRemoveFromParent.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRemoveFromParent.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRemoveFromParent.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRemoveFromParent.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRemoveFromParent.cpp: In function ‘void test_RemoveFromParent_successfulRemoves_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRemoveFromParent.cpp:73:10: warning: too many arguments for format [-Wformat-extra-args] 73 | fail("readSBML(\"multiple-ids.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRemoveFromParent.cpp: In function ‘void test_RemoveFromParent_alreadyRemoved_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRemoveFromParent.cpp:338:10: warning: too many arguments for format [-Wformat-extra-args] 338 | fail("readSBML(\"multiple-ids.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRenameIDs.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRenameIDs.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestRenameIDs.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestRenameIDs.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRenameIDs.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRenameIDs.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRenameIDs.cpp:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRenameIDs.cpp: In function ‘void test_RenameIDs_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRenameIDs.cpp:73:10: warning: too many arguments for format [-Wformat-extra-args] 73 | fail("readSBML(\"multiple-ids.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRequiredAttributes.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRequiredAttributes.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestRequiredAttributes.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestRequiredAttributes.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRequiredAttributes.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRequiredAttributes.cpp:55: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRequiredElements.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRequiredElements.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestRequiredElements.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestRequiredElements.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRequiredElements.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRequiredElements.cpp:55: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConstructorException.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConstructorException.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestSBMLConstructorException.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSBMLConstructorException.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLConstructorException.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLConstructorException.cpp:55: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertFromL3V2.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertFromL3V2.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertFromL3V2.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertFromL3V2.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLConvertFromL3V2.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLConvertFromL3V2.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertStrict.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertStrict.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertStrict.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertStrict.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLConvertStrict.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLConvertStrict.cpp:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLError.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLError.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestSBMLError.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSBMLError.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLError.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLError.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLNamespaces.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLNamespaces.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestSBMLNamespaces.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSBMLNamespaces.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLNamespaces.cpp [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLParentObject.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLParentObject.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestSBMLParentObject.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSBMLParentObject.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLParentObject.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLParentObject.cpp:55: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLTransforms.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLTransforms.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestSBMLTransforms.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSBMLTransforms.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLTransforms.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLTransforms.cpp:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLTransforms.cpp:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLTransforms.cpp: In function ‘void test_SBMLTransforms_replaceFD_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLTransforms.cpp:79:10: warning: too many arguments for format [-Wformat-extra-args] 79 | fail("readSBML(\"multiple-functions.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLTransforms.cpp: In function ‘void test_SBMLTransforms_replaceIA_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLTransforms.cpp:613:10: warning: too many arguments for format [-Wformat-extra-args] 613 | fail("readSBML(\"initialAssignments.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLTransforms.cpp: In function ‘void test_SBMLTransforms_replaceIA_species_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLTransforms.cpp:767:10: warning: too many arguments for format [-Wformat-extra-args] 767 | fail("readSBML(\"initialAssignments_species.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLTransforms.cpp: In function ‘void test_SBMLTransforms_evaluateL3V2ASTWithModel_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLTransforms.cpp:837:10: warning: too many arguments for format [-Wformat-extra-args] 837 | fail("readSBML(\"multiple-functions.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLTransforms.cpp: In function ‘void test_SBMLTransforms_replaceIAWithFD_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLTransforms.cpp:874:10: warning: too many arguments for format [-Wformat-extra-args] 874 | fail("readSBML(\"initialAssignments.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLTransforms.cpp: At global scope: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLTransforms.cpp:860:12: warning: ‘test_SBMLTransforms_replaceIAWithFD’ defined but not used [-Wunused-variable] 860 | START_TEST(test_SBMLTransforms_replaceIAWithFD) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLValidators.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLValidators.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestSBMLValidators.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSBMLValidators.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLValidators.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLValidators.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBase.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBase.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestSBase.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSBase.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp:54: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp: In function ‘void SBaseTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp:80:10: warning: too many arguments for format [-Wformat-extra-args] 80 | fail("'new(std::nothrow) SBase;' returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp: In function ‘void test_SBase_setMetaId_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp:105:10: warning: too many arguments for format [-Wformat-extra-args] 105 | fail("SBase_setMetaId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp:117:10: warning: too many arguments for format [-Wformat-extra-args] 117 | fail("SBase_setMetaId(S, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp: In function ‘void test_SBase_setNotes_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp:136:10: warning: too many arguments for format [-Wformat-extra-args] 136 | fail("SBase_setNotes(...) did not make a copy of node."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp:156:10: warning: too many arguments for format [-Wformat-extra-args] 156 | fail("SBase_setNotes(c, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp: In function ‘void test_SBase_setAnnotation_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp:222:10: warning: too many arguments for format [-Wformat-extra-args] 222 | fail("SBase_setAnnotation(...) did not make a copy of node."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp:234:10: warning: too many arguments for format [-Wformat-extra-args] 234 | fail("SBase_setAnnotation(S, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp: In function ‘void test_SBase_setNotesString_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp:442:10: warning: too many arguments for format [-Wformat-extra-args] 442 | fail("SBase_setNotesString(...) did not make a copy of node."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp:467:10: warning: too many arguments for format [-Wformat-extra-args] 467 | fail("SBase_getNotesString(c, "") did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp:477:10: warning: too many arguments for format [-Wformat-extra-args] 477 | fail("SBase_setNotesString(...) did not make a copy of node."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp: In function ‘void test_SBase_setNotesString_l3_addMarkup_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp:518:10: warning: too many arguments for format [-Wformat-extra-args] 518 | fail("SBase_setNotesString(...) did not make a copy of node."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp:538:10: warning: too many arguments for format [-Wformat-extra-args] 538 | fail("SBase_setNotesString(...) did not make a copy of node."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp: In function ‘void test_SBase_setNotesFromMarkdown_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp:568:14: warning: too many arguments for format [-Wformat-extra-args] 568 | fail("SBase_setNotesFromMarkdown(...) did not make a copy of node."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp:592:14: warning: too many arguments for format [-Wformat-extra-args] 592 | fail("SBase_getNotesString(c, "") did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp:602:14: warning: too many arguments for format [-Wformat-extra-args] 602 | fail("SBase_setNotesString(...) did not make a copy of node."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp: In function ‘void test_SBase_setAnnotationString_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp:665:10: warning: too many arguments for format [-Wformat-extra-args] 665 | fail("SBase_setAnnotationString(...) did not make a copy of node."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp:689:10: warning: too many arguments for format [-Wformat-extra-args] 689 | fail("SBase_getAnnotationString(S, "") did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase.cpp:699:10: warning: too many arguments for format [-Wformat-extra-args] 699 | fail("SBase_setAnnotationString(...) did not make a copy of node."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBaseIdName.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBaseIdName.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestSBaseIdName.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSBaseIdName.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp:55: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp: In function ‘void SBaseIdNameTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp:90:10: warning: too many arguments for format [-Wformat-extra-args] 90 | fail("'new(std::nothrow) SBase;' returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp:97:10: warning: too many arguments for format [-Wformat-extra-args] 97 | fail("'new(std::nothrow) SBase;' returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp:104:10: warning: too many arguments for format [-Wformat-extra-args] 104 | fail("'new(std::nothrow) SBase;' returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp:111:10: warning: too many arguments for format [-Wformat-extra-args] 111 | fail("'new(std::nothrow) SBase;' returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp:118:10: warning: too many arguments for format [-Wformat-extra-args] 118 | fail("'new(std::nothrow) SBase;' returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp:125:10: warning: too many arguments for format [-Wformat-extra-args] 125 | fail("'new(std::nothrow) SBase;' returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp:132:10: warning: too many arguments for format [-Wformat-extra-args] 132 | fail("'new(std::nothrow) SBase;' returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp:139:10: warning: too many arguments for format [-Wformat-extra-args] 139 | fail("'new(std::nothrow) SBase;' returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp:146:10: warning: too many arguments for format [-Wformat-extra-args] 146 | fail("'new(std::nothrow) SBase;' returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp:153:10: warning: too many arguments for format [-Wformat-extra-args] 153 | fail("'new(std::nothrow) SBase;' returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp: In function ‘void test_SBase_setName_1_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp:232:10: warning: too many arguments for format [-Wformat-extra-args] 232 | fail("SBase_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp:244:10: warning: too many arguments for format [-Wformat-extra-args] 244 | fail("SBase_setName(S31, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp: In function ‘void test_SBase_setName_2_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp:308:10: warning: too many arguments for format [-Wformat-extra-args] 308 | fail("SBase_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp:320:10: warning: too many arguments for format [-Wformat-extra-args] 320 | fail("SBase_setName(S32, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp: In function ‘void test_SBase_setName_3_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp:384:10: warning: too many arguments for format [-Wformat-extra-args] 384 | fail("SBase_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp:396:10: warning: too many arguments for format [-Wformat-extra-args] 396 | fail("SBase_setName(E31, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp: In function ‘void test_SBase_setName_4_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp:460:10: warning: too many arguments for format [-Wformat-extra-args] 460 | fail("SBase_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp:472:10: warning: too many arguments for format [-Wformat-extra-args] 472 | fail("SBase_setName(E32, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp: In function ‘void test_SBase_setName_6_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp:595:10: warning: too many arguments for format [-Wformat-extra-args] 595 | fail("SBase_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp:607:10: warning: too many arguments for format [-Wformat-extra-args] 607 | fail("SBase_setName(U32, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp: In function ‘void test_SBase_setName_8_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp:773:10: warning: too many arguments for format [-Wformat-extra-args] 773 | fail("SBase_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp:785:10: warning: too many arguments for format [-Wformat-extra-args] 785 | fail("SBase_setName(AR32, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp: In function ‘void test_SBase_setName_10_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp:978:10: warning: too many arguments for format [-Wformat-extra-args] 978 | fail("SBase_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBaseIdName.cpp:990:10: warning: too many arguments for format [-Wformat-extra-args] 990 | fail("SBase_setName(EA32, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBase_newSetters.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBase_newSetters.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestSBase_newSetters.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSBase_newSetters.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase_newSetters.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase_newSetters.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase_newSetters.cpp:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase_newSetters.cpp: In function ‘void SBaseTest_setup1()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBase_newSetters.cpp:79:10: warning: too many arguments for format [-Wformat-extra-args] 79 | fail("'new(std::nothrow) SBase;' returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestWriteL3SBML.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestWriteL3SBML.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestWriteL3SBML.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestWriteL3SBML.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestWriteL3SBML.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestWriteL3SBML.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestWriteL3V2SBML.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestWriteL3V2SBML.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestWriteL3V2SBML.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestWriteL3V2SBML.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestWriteL3V2SBML.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestWriteL3V2SBML.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestWriteSBML.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestWriteSBML.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestWriteSBML.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestWriteSBML.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestWriteSBML.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestWriteSBML.cpp:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAlgebraicRule.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAlgebraicRule.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestAlgebraicRule.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestAlgebraicRule.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestAlgebraicRule.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestAlgebraicRule.c:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestAlgebraicRule.c:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestAlgebraicRule.c: In function ‘void AlgebraicRuleTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestAlgebraicRule.c:73:10: warning: too many arguments for format [-Wformat-extra-args] 73 | fail("AlgebraicRule_createAlgebraic() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAssignmentRule.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAssignmentRule.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestAssignmentRule.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestAssignmentRule.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestAssignmentRule.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestAssignmentRule.c:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestAssignmentRule.c:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestAssignmentRule.c: In function ‘void AssignmentRuleTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestAssignmentRule.c:72:10: warning: too many arguments for format [-Wformat-extra-args] 72 | fail("AssignmentRule_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestAssignmentRule.c: In function ‘void test_AssignmentRule_setVariable_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestAssignmentRule.c:118:10: warning: too many arguments for format [-Wformat-extra-args] 118 | fail("AssignmentRule_setVariable(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestAssignmentRule.c:130:10: warning: too many arguments for format [-Wformat-extra-args] 130 | fail("AssignmentRule_setVariable(AR, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestAssignmentRule.c: In function ‘void test_AssignmentRule_unsetVariable_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestAssignmentRule.c:151:10: warning: too many arguments for format [-Wformat-extra-args] 151 | fail("AssignmentRule_unsetVariable(AR) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartment.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartment.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestCompartment.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestCompartment.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartment.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartment.c:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartment.c:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartment.c: In function ‘void CompartmentTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartment.c:70:10: warning: too many arguments for format [-Wformat-extra-args] 70 | fail("Compartment_create(2, 4) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartment.c: In function ‘void test_Compartment_setId_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartment.c:184:10: warning: too many arguments for format [-Wformat-extra-args] 184 | fail("Compartment_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartment.c:196:10: warning: too many arguments for format [-Wformat-extra-args] 196 | fail("Compartment_setId(C, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartment.c: In function ‘void test_Compartment_setName_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartment.c:214:10: warning: too many arguments for format [-Wformat-extra-args] 214 | fail("Compartment_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartment.c:226:10: warning: too many arguments for format [-Wformat-extra-args] 226 | fail("Compartment_setName(C, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartment.c: In function ‘void test_Compartment_setUnits_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartment.c:244:10: warning: too many arguments for format [-Wformat-extra-args] 244 | fail("Compartment_setUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartment.c:256:10: warning: too many arguments for format [-Wformat-extra-args] 256 | fail("Compartment_setUnits(C, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartment.c: In function ‘void test_Compartment_setOutside_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartment.c:274:10: warning: too many arguments for format [-Wformat-extra-args] 274 | fail("Compartment_setOutside(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartment.c:286:10: warning: too many arguments for format [-Wformat-extra-args] 286 | fail("Compartment_setOutside(C, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartmentType.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartmentType.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestCompartmentType.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestCompartmentType.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartmentType.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartmentType.c:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartmentType.c:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartmentType.c: In function ‘void CompartmentTypeTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartmentType.c:69:10: warning: too many arguments for format [-Wformat-extra-args] 69 | fail("CompartmentType_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartmentType.c: In function ‘void test_CompartmentType_setId_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartmentType.c:138:10: warning: too many arguments for format [-Wformat-extra-args] 138 | fail("CompartmentType_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartmentType.c:150:10: warning: too many arguments for format [-Wformat-extra-args] 150 | fail("CompartmentType_setId(CT, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartmentType.c: In function ‘void test_CompartmentType_setName_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartmentType.c:168:10: warning: too many arguments for format [-Wformat-extra-args] 168 | fail("CompartmentType_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartmentType.c:180:10: warning: too many arguments for format [-Wformat-extra-args] 180 | fail("CompartmentType_setName(CT, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartmentType_newSetters.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartmentType_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestCompartmentType_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestCompartmentType_newSetters.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartmentType_newSetters.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartmentType_newSetters.c:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartmentType_newSetters.c:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartmentType_newSetters.c: In function ‘void CompartmentTypeTest1_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartmentType_newSetters.c:70:10: warning: too many arguments for format [-Wformat-extra-args] 70 | fail("CompartmentType_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartmentVolumeRule.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartmentVolumeRule.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestCompartmentVolumeRule.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestCompartmentVolumeRule.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartmentVolumeRule.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartmentVolumeRule.c:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartmentVolumeRule.c: In function ‘void CompartmentVolumeRuleTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartmentVolumeRule.c:68:10: warning: too many arguments for format [-Wformat-extra-args] 68 | fail("Rule_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartmentVolumeRule.c: In function ‘void test_CompartmentVolumeRule_setCompartment_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartmentVolumeRule.c:149:11: warning: too many arguments for format [-Wformat-extra-args] 149 | fail( "Rule_setVariable(...)" | ^~~~~~~~~~~~~~~~~~~~~~~ 150 | " did not make a copy of string." ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartmentVolumeRule.c:164:11: warning: too many arguments for format [-Wformat-extra-args] 164 | fail( "Rule_setVariable(CVR, NULL)" | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 | " did not clear string." ); | ~~~~~~~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartment_newSetters.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartment_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestCompartment_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestCompartment_newSetters.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartment_newSetters.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartment_newSetters.c:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartment_newSetters.c:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartment_newSetters.c: In function ‘void CompartmentTest1_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestCompartment_newSetters.c:70:10: warning: too many arguments for format [-Wformat-extra-args] 70 | fail("Compartment_create(2, 4) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestConstraint.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestConstraint.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestConstraint.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestConstraint.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConstraint.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConstraint.c:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConstraint.c:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConstraint.c: In function ‘void ConstraintTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConstraint.c:74:10: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("Constraint_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConstraint.c: In function ‘void test_Constraint_setMath_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConstraint.c:143:10: warning: too many arguments for format [-Wformat-extra-args] 143 | fail("Constraint_setMath(C, NULL) did not clear ASTNode."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConstraint.c: In function ‘void test_Constraint_setMessage_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConstraint.c:187:10: warning: too many arguments for format [-Wformat-extra-args] 187 | fail("Constraint_unsetMessage(C) did not clear XMLNode."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConstraint.c: In function ‘void test_Constraint_setMessageFromMarkdown_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConstraint.c:214:14: warning: too many arguments for format [-Wformat-extra-args] 214 | fail("Constraint_setMessageFromMarkdown(...) did not make a copy of node."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConstraint.c:238:14: warning: too many arguments for format [-Wformat-extra-args] 238 | fail("Constraint_getMessageString(C, "") did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConstraint.c:248:14: warning: too many arguments for format [-Wformat-extra-args] 248 | fail("Constraint_setMessageString(...) did not make a copy of node."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestConstraint_newSetters.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestConstraint_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestConstraint_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestConstraint_newSetters.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConstraint_newSetters.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConstraint_newSetters.c:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConstraint_newSetters.c:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConstraint_newSetters.c: In function ‘void ConstraintTest1_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConstraint_newSetters.c:74:10: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("Constraint_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConstraint_newSetters.c: In function ‘void test_Constraint_setMessage1_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConstraint_newSetters.c:137:10: warning: too many arguments for format [-Wformat-extra-args] 137 | fail("Constraint_unsetMessage(C) did not clear XMLNode."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConstraint_newSetters.c: In function ‘void test_Constraint_setMessage2_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestConstraint_newSetters.c:184:10: warning: too many arguments for format [-Wformat-extra-args] 184 | fail("Constraint_unsetMessage(C) did not clear XMLNode."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestDelay.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestDelay.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestDelay.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestDelay.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestDelay.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestDelay.c:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestDelay.c:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestDelay.c: In function ‘void DelayTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestDelay.c:72:10: warning: too many arguments for format [-Wformat-extra-args] 72 | fail("Delay_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestDelay.c: In function ‘void test_Delay_setMath_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestDelay.c:166:10: warning: too many arguments for format [-Wformat-extra-args] 166 | fail("Delay_setMath(D, NULL) did not clear ASTNode."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEvent.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEvent.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestEvent.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestEvent.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEvent.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEvent.c:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEvent.c:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEvent.c: In function ‘void EventTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEvent.c:74:10: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("Event_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEvent.c: In function ‘void test_Event_setId_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEvent.c:154:10: warning: too many arguments for format [-Wformat-extra-args] 154 | fail("Event_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEvent.c:166:10: warning: too many arguments for format [-Wformat-extra-args] 166 | fail("Event_setId(E, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEvent.c: In function ‘void test_Event_setName_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEvent.c:184:10: warning: too many arguments for format [-Wformat-extra-args] 184 | fail("Event_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEvent.c:196:10: warning: too many arguments for format [-Wformat-extra-args] 196 | fail("Event_setName(E, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEvent.c: In function ‘void test_Event_setTrigger_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEvent.c:216:10: warning: too many arguments for format [-Wformat-extra-args] 216 | fail("Event_setTrigger(...) did not make a copy of trigger."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEvent.c:228:10: warning: too many arguments for format [-Wformat-extra-args] 228 | fail("Event_setTrigger(E, NULL) did not clear trigger."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEvent.c: In function ‘void test_Event_setDelay_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEvent.c:250:10: warning: too many arguments for format [-Wformat-extra-args] 250 | fail("Event_setDelay(...) did not make a copy of Delay."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEvent.c:262:10: warning: too many arguments for format [-Wformat-extra-args] 262 | fail("Event_setDelay(E, NULL) did not clear Delay."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEvent.c: In function ‘void test_Event_setTimeUnits_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEvent.c:283:10: warning: too many arguments for format [-Wformat-extra-args] 283 | fail("Event_setTimeUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEvent.c:295:10: warning: too many arguments for format [-Wformat-extra-args] 295 | fail("Event_setTimeUnits(E, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEventAssignment.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEventAssignment.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestEventAssignment.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestEventAssignment.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEventAssignment.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEventAssignment.c:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEventAssignment.c:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEventAssignment.c: In function ‘void EventAssignmentTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEventAssignment.c:72:10: warning: too many arguments for format [-Wformat-extra-args] 72 | fail("EventAssignment_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEventAssignment.c: In function ‘void test_EventAssignment_setVariable_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEventAssignment.c:138:10: warning: too many arguments for format [-Wformat-extra-args] 138 | fail("EventAssignment_setVariable(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEventAssignment.c:150:10: warning: too many arguments for format [-Wformat-extra-args] 150 | fail("EventAssignment_setVariable(EA, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEventAssignment.c: In function ‘void test_EventAssignment_unsetVariable_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEventAssignment.c:168:10: warning: too many arguments for format [-Wformat-extra-args] 168 | fail("EventAssignment_setVariable(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEventAssignment.c:176:10: warning: too many arguments for format [-Wformat-extra-args] 176 | fail("EventAssignment_unsetVariable(EA) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEventAssignment.c: In function ‘void test_EventAssignment_setMath_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEventAssignment.c:218:10: warning: too many arguments for format [-Wformat-extra-args] 218 | fail("EventAssignment_setMath(EA, NULL) did not clear ASTNode."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEventAssignment_newSetters.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEventAssignment_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestEventAssignment_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestEventAssignment_newSetters.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEventAssignment_newSetters.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEventAssignment_newSetters.c:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEventAssignment_newSetters.c:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEventAssignment_newSetters.c: In function ‘void EventAssignmentTest1_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEventAssignment_newSetters.c:75:10: warning: too many arguments for format [-Wformat-extra-args] 75 | fail("EventAssignment_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEvent_newSetters.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEvent_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestEvent_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestEvent_newSetters.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEvent_newSetters.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEvent_newSetters.c:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEvent_newSetters.c:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEvent_newSetters.c: In function ‘void EventTest1_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestEvent_newSetters.c:75:10: warning: too many arguments for format [-Wformat-extra-args] 75 | fail("Event_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestFunctionDefinition.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestFunctionDefinition.c:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestFunctionDefinition.c:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestFunctionDefinition.c: In function ‘void FunctionDefinitionTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestFunctionDefinition.c:72:10: warning: too many arguments for format [-Wformat-extra-args] 72 | fail("FunctionDefinition_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestFunctionDefinition.c: In function ‘void test_FunctionDefinition_setId_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestFunctionDefinition.c:207:10: warning: too many arguments for format [-Wformat-extra-args] 207 | fail("FunctionDefinition_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestFunctionDefinition.c:219:10: warning: too many arguments for format [-Wformat-extra-args] 219 | fail("FunctionDefinition_setId(FD, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestFunctionDefinition.c: In function ‘void test_FunctionDefinition_setName_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestFunctionDefinition.c:237:10: warning: too many arguments for format [-Wformat-extra-args] 237 | fail("FunctionDefinition_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestFunctionDefinition.c:249:10: warning: too many arguments for format [-Wformat-extra-args] 249 | fail("FunctionDefinition_setName(FD, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestFunctionDefinition.c: In function ‘void test_FunctionDefinition_setMath_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestFunctionDefinition.c:291:10: warning: too many arguments for format [-Wformat-extra-args] 291 | fail("FunctionDefinition_setMath(FD, NULL) did not clear ASTNode."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition_newSetters.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition_newSetters.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestFunctionDefinition_newSetters.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestFunctionDefinition_newSetters.c:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestFunctionDefinition_newSetters.c:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestFunctionDefinition_newSetters.c: In function ‘void FunctionDefinitionTest1_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestFunctionDefinition_newSetters.c:72:10: warning: too many arguments for format [-Wformat-extra-args] 72 | fail("FunctionDefinition_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestInitialAssignment.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestInitialAssignment.c:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestInitialAssignment.c:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestInitialAssignment.c: In function ‘void InitialAssignmentTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestInitialAssignment.c:72:10: warning: too many arguments for format [-Wformat-extra-args] 72 | fail("InitialAssignment_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestInitialAssignment.c: In function ‘void test_InitialAssignment_setSymbol_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestInitialAssignment.c:135:10: warning: too many arguments for format [-Wformat-extra-args] 135 | fail("InitialAssignment_setSymbol(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestInitialAssignment.c:147:10: warning: too many arguments for format [-Wformat-extra-args] 147 | fail("InitialAssignment_setSymbol(IA, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestInitialAssignment.c: In function ‘void test_InitialAssignment_unsetSymbol_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestInitialAssignment.c:165:10: warning: too many arguments for format [-Wformat-extra-args] 165 | fail("InitialAssignment_setSymbol(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestInitialAssignment.c:173:10: warning: too many arguments for format [-Wformat-extra-args] 173 | fail("InitialAssignment_unsetSymbol(IA, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestInitialAssignment.c: In function ‘void test_InitialAssignment_setMath_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestInitialAssignment.c:214:10: warning: too many arguments for format [-Wformat-extra-args] 214 | fail("InitialAssignment_setMath(IA, NULL) did not clear ASTNode."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment_newSetters.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment_newSetters.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestInitialAssignment_newSetters.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestInitialAssignment_newSetters.c:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestInitialAssignment_newSetters.c:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestInitialAssignment_newSetters.c: In function ‘void InitialAssignmentTest1_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestInitialAssignment_newSetters.c:75:10: warning: too many arguments for format [-Wformat-extra-args] 75 | fail("InitialAssignment_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestKineticLaw.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestKineticLaw.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestKineticLaw.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestKineticLaw.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestKineticLaw.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestKineticLaw.c:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestKineticLaw.c:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestKineticLaw.c: In function ‘void KineticLawTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestKineticLaw.c:73:10: warning: too many arguments for format [-Wformat-extra-args] 73 | fail("KineticLaw_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestKineticLaw.c: In function ‘void test_KineticLaw_setFormula_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestKineticLaw.c:197:10: warning: too many arguments for format [-Wformat-extra-args] 197 | fail("KineticLaw_setFormula(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestKineticLaw.c:209:10: warning: too many arguments for format [-Wformat-extra-args] 209 | fail("KineticLaw_setFormula(kl, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestKineticLaw.c: In function ‘void test_KineticLaw_setMath_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestKineticLaw.c:288:11: warning: too many arguments for format [-Wformat-extra-args] 288 | fail( "KineticLaw_setMath(kl, NULL) did not clear ASTNode." ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestKineticLaw_newSetters.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestKineticLaw_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestKineticLaw_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestKineticLaw_newSetters.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestKineticLaw_newSetters.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestKineticLaw_newSetters.c:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestKineticLaw_newSetters.c:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestKineticLaw_newSetters.c: In function ‘void KineticLawTest1_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestKineticLaw_newSetters.c:74:10: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("KineticLaw_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Compartment.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Compartment.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestL3Compartment.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestL3Compartment.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Compartment.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Compartment.c:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Compartment.c:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Compartment.c: In function ‘void L3CompartmentTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Compartment.c:69:10: warning: too many arguments for format [-Wformat-extra-args] 69 | fail("Compartment_create(3, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Compartment.c: In function ‘void test_L3_Compartment_id_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Compartment.c:130:10: warning: too many arguments for format [-Wformat-extra-args] 130 | fail("Compartment_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Compartment.c: In function ‘void test_L3_Compartment_name_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Compartment.c:150:10: warning: too many arguments for format [-Wformat-extra-args] 150 | fail("Compartment_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Compartment.c:159:10: warning: too many arguments for format [-Wformat-extra-args] 159 | fail("Compartment_unsetName(C) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Compartment.c: In function ‘void test_L3_Compartment_units_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Compartment.c:179:10: warning: too many arguments for format [-Wformat-extra-args] 179 | fail("Compartment_setUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Compartment.c:188:10: warning: too many arguments for format [-Wformat-extra-args] 188 | fail("Compartment_unsetUnits(C, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Event.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Event.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestL3Event.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestL3Event.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Event.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Event.c:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Event.c:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Event.c: In function ‘void L3EventTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Event.c:72:10: warning: too many arguments for format [-Wformat-extra-args] 72 | fail("Event_create(3, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Event.c: In function ‘void test_L3_Event_id_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Event.c:123:10: warning: too many arguments for format [-Wformat-extra-args] 123 | fail("Event_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Event.c:132:10: warning: too many arguments for format [-Wformat-extra-args] 132 | fail("Event_unsetId(E) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Event.c: In function ‘void test_L3_Event_name_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Event.c:152:10: warning: too many arguments for format [-Wformat-extra-args] 152 | fail("Event_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Event.c:161:10: warning: too many arguments for format [-Wformat-extra-args] 161 | fail("Event_unsetName(E) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3KineticLaw.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3KineticLaw.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestL3KineticLaw.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestL3KineticLaw.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3KineticLaw.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3KineticLaw.c:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3KineticLaw.c:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3KineticLaw.c: In function ‘void L3KineticLawTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3KineticLaw.c:70:10: warning: too many arguments for format [-Wformat-extra-args] 70 | fail("KineticLaw_create(3, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3LocalParameter.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3LocalParameter.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestL3LocalParameter.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestL3LocalParameter.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3LocalParameter.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3LocalParameter.c:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3LocalParameter.c:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3LocalParameter.c: In function ‘void L3LocalParameterTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3LocalParameter.c:70:10: warning: too many arguments for format [-Wformat-extra-args] 70 | fail("LocalParameter_create(3, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3LocalParameter.c: In function ‘void test_L3_LocalParameter_id_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3LocalParameter.c:123:10: warning: too many arguments for format [-Wformat-extra-args] 123 | fail("LocalParameter_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3LocalParameter.c: In function ‘void test_L3_LocalParameter_name_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3LocalParameter.c:143:10: warning: too many arguments for format [-Wformat-extra-args] 143 | fail("LocalParameter_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3LocalParameter.c:152:10: warning: too many arguments for format [-Wformat-extra-args] 152 | fail("LocalParameter_unsetName(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3LocalParameter.c: In function ‘void test_L3_LocalParameter_units_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3LocalParameter.c:172:10: warning: too many arguments for format [-Wformat-extra-args] 172 | fail("LocalParameter_setUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3LocalParameter.c:181:10: warning: too many arguments for format [-Wformat-extra-args] 181 | fail("LocalParameter_unsetUnits(P, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Model.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Model.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestL3Model.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestL3Model.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c: In function ‘void L3ModelTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c:70:10: warning: too many arguments for format [-Wformat-extra-args] 70 | fail("Model_create(3, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c: In function ‘void test_L3_Model_id_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c:131:10: warning: too many arguments for format [-Wformat-extra-args] 131 | fail("Model_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c:140:10: warning: too many arguments for format [-Wformat-extra-args] 140 | fail("Model_unsetId(M) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c: In function ‘void test_L3_Model_name_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c:160:10: warning: too many arguments for format [-Wformat-extra-args] 160 | fail("Model_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c:169:10: warning: too many arguments for format [-Wformat-extra-args] 169 | fail("Model_unsetName(M) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c: In function ‘void test_L3_Model_substanceUnits_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c:189:10: warning: too many arguments for format [-Wformat-extra-args] 189 | fail("Model_setSubstanceUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c:198:10: warning: too many arguments for format [-Wformat-extra-args] 198 | fail("Model_unsetSubstanceUnits(M) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c: In function ‘void test_L3_Model_timeUnits_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c:218:10: warning: too many arguments for format [-Wformat-extra-args] 218 | fail("Model_setTimeUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c:227:10: warning: too many arguments for format [-Wformat-extra-args] 227 | fail("Model_unsetTimeUnits(M) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c: In function ‘void test_L3_Model_volumeUnits_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c:247:10: warning: too many arguments for format [-Wformat-extra-args] 247 | fail("Model_setVolumeUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c:256:10: warning: too many arguments for format [-Wformat-extra-args] 256 | fail("Model_unsetVolumeUnits(M) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c: In function ‘void test_L3_Model_areaUnits_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c:276:10: warning: too many arguments for format [-Wformat-extra-args] 276 | fail("Model_setAreaUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c:285:10: warning: too many arguments for format [-Wformat-extra-args] 285 | fail("Model_unsetAreaUnits(M) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c: In function ‘void test_L3_Model_lengthUnits_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c:305:10: warning: too many arguments for format [-Wformat-extra-args] 305 | fail("Model_setLengthUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c:314:10: warning: too many arguments for format [-Wformat-extra-args] 314 | fail("Model_unsetLengthUnits(M) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c: In function ‘void test_L3_Model_extentUnits_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c:334:10: warning: too many arguments for format [-Wformat-extra-args] 334 | fail("Model_setExtentUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c:343:10: warning: too many arguments for format [-Wformat-extra-args] 343 | fail("Model_unsetExtentUnits(M) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c: In function ‘void test_L3_Model_conversionFactor_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c:363:10: warning: too many arguments for format [-Wformat-extra-args] 363 | fail("Model_setConversionFactor(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Model.c:372:10: warning: too many arguments for format [-Wformat-extra-args] 372 | fail("Model_unsetConversionFactor(M) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Parameter.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Parameter.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestL3Parameter.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestL3Parameter.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Parameter.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Parameter.c:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Parameter.c:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Parameter.c: In function ‘void L3ParameterTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Parameter.c:70:10: warning: too many arguments for format [-Wformat-extra-args] 70 | fail("Parameter_create(3, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Parameter.c: In function ‘void test_L3_Parameter_id_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Parameter.c:125:10: warning: too many arguments for format [-Wformat-extra-args] 125 | fail("Parameter_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Parameter.c: In function ‘void test_L3_Parameter_name_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Parameter.c:145:10: warning: too many arguments for format [-Wformat-extra-args] 145 | fail("Parameter_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Parameter.c:154:10: warning: too many arguments for format [-Wformat-extra-args] 154 | fail("Parameter_unsetName(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Parameter.c: In function ‘void test_L3_Parameter_units_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Parameter.c:174:10: warning: too many arguments for format [-Wformat-extra-args] 174 | fail("Parameter_setUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Parameter.c:183:10: warning: too many arguments for format [-Wformat-extra-args] 183 | fail("Parameter_unsetUnits(P, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Reaction.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Reaction.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestL3Reaction.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestL3Reaction.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Reaction.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Reaction.c:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Reaction.c:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Reaction.c: In function ‘void L3ReactionTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Reaction.c:71:10: warning: too many arguments for format [-Wformat-extra-args] 71 | fail("Reaction_create(3, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Reaction.c:77:10: warning: too many arguments for format [-Wformat-extra-args] 77 | fail("Reaction_create(3, 2) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Reaction.c: In function ‘void test_L3_Reaction_id_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Reaction.c:133:10: warning: too many arguments for format [-Wformat-extra-args] 133 | fail("Reaction_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Reaction.c: In function ‘void test_L3_Reaction_name_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Reaction.c:153:10: warning: too many arguments for format [-Wformat-extra-args] 153 | fail("Reaction_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Reaction.c:162:10: warning: too many arguments for format [-Wformat-extra-args] 162 | fail("Reaction_unsetName(R) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Reaction.c: In function ‘void test_L3_Reaction_compartment_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Reaction.c:182:10: warning: too many arguments for format [-Wformat-extra-args] 182 | fail("Reaction_setCompartment(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Reaction.c:191:10: warning: too many arguments for format [-Wformat-extra-args] 191 | fail("Reaction_unsetCompartment(R, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Species.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Species.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestL3Species.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestL3Species.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Species.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Species.c:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Species.c:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Species.c: In function ‘void L3SpeciesTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Species.c:73:10: warning: too many arguments for format [-Wformat-extra-args] 73 | fail("Species_create(3, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Species.c: In function ‘void test_L3_Species_id_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Species.c:138:10: warning: too many arguments for format [-Wformat-extra-args] 138 | fail("Species_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Species.c: In function ‘void test_L3_Species_name_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Species.c:158:10: warning: too many arguments for format [-Wformat-extra-args] 158 | fail("Species_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Species.c:167:10: warning: too many arguments for format [-Wformat-extra-args] 167 | fail("Species_unsetName(S) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Species.c: In function ‘void test_L3_Species_compartment_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Species.c:187:10: warning: too many arguments for format [-Wformat-extra-args] 187 | fail("Species_setCompartment(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Species.c: In function ‘void test_L3_Species_substanceUnits_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Species.c:252:10: warning: too many arguments for format [-Wformat-extra-args] 252 | fail("Species_setSubstanceUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Species.c:261:10: warning: too many arguments for format [-Wformat-extra-args] 261 | fail("Species_unsetSubstanceUnits(S, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Species.c: In function ‘void test_L3_Species_conversionFactor_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Species.c:368:10: warning: too many arguments for format [-Wformat-extra-args] 368 | fail("Species_setConversionFactor(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Species.c:377:10: warning: too many arguments for format [-Wformat-extra-args] 377 | fail("Species_unsetConversionFactor(S, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3SpeciesReference.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3SpeciesReference.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestL3SpeciesReference.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestL3SpeciesReference.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3SpeciesReference.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3SpeciesReference.c:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3SpeciesReference.c:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3SpeciesReference.c: In function ‘void L3SpeciesReferenceTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3SpeciesReference.c:67:10: warning: too many arguments for format [-Wformat-extra-args] 67 | fail("SpeciesReference_create(3, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3SpeciesReference.c: In function ‘void test_L3_SpeciesReference_id_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3SpeciesReference.c:122:10: warning: too many arguments for format [-Wformat-extra-args] 122 | fail("SpeciesReference_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3SpeciesReference.c: In function ‘void test_L3_SpeciesReference_name_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3SpeciesReference.c:142:10: warning: too many arguments for format [-Wformat-extra-args] 142 | fail("SpeciesReference_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3SpeciesReference.c:151:10: warning: too many arguments for format [-Wformat-extra-args] 151 | fail("SpeciesReference_unsetName(SR) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3SpeciesReference.c: In function ‘void test_L3_SpeciesReference_species_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3SpeciesReference.c:171:10: warning: too many arguments for format [-Wformat-extra-args] 171 | fail("SpeciesReference_setSpecies(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Trigger.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Trigger.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestL3Trigger.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestL3Trigger.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Trigger.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Trigger.c:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Trigger.c:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Trigger.c: In function ‘void L3TriggerTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Trigger.c:71:10: warning: too many arguments for format [-Wformat-extra-args] 71 | fail("Trigger_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Unit.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Unit.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestL3Unit.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestL3Unit.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Unit.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Unit.c:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Unit.c:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Unit.c: In function ‘void L3UnitTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestL3Unit.c:70:10: warning: too many arguments for format [-Wformat-extra-args] 70 | fail("Unit_create(3, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestListOf.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestListOf.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestListOf.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestListOf.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestListOf.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestListOf.c:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestModel.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestModel.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestModel.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestModel.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestModel.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestModel.c:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestModel.c:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestModel.c: In function ‘void ModelTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestModel.c:68:10: warning: too many arguments for format [-Wformat-extra-args] 68 | fail("Model_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestModel.c: In function ‘void test_Model_setId_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestModel.c:154:10: warning: too many arguments for format [-Wformat-extra-args] 154 | fail("Model_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestModel.c:166:10: warning: too many arguments for format [-Wformat-extra-args] 166 | fail("Model_setId(M, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestModel.c: In function ‘void test_Model_setName_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestModel.c:189:10: warning: too many arguments for format [-Wformat-extra-args] 189 | fail("Model_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestModel.c:201:10: warning: too many arguments for format [-Wformat-extra-args] 201 | fail("Model_setName(M, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestModel_newSetters.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestModel_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestModel_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestModel_newSetters.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestModel_newSetters.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestModel_newSetters.c:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestModel_newSetters.c:65: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestModel_newSetters.c: In function ‘void ModelTest1_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestModel_newSetters.c:87:10: warning: too many arguments for format [-Wformat-extra-args] 87 | fail("Model_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestModifierSpeciesReference.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestModifierSpeciesReference.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestModifierSpeciesReference.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestModifierSpeciesReference.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestModifierSpeciesReference.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestModifierSpeciesReference.c:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestModifierSpeciesReference.c:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestModifierSpeciesReference.c: In function ‘void ModifierSpeciesReferenceTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestModifierSpeciesReference.c:72:11: warning: too many arguments for format [-Wformat-extra-args] 72 | fail( "ModifierSpeciesReference_create() returned a NULL pointer." ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestModifierSpeciesReference.c: In function ‘void test_ModifierSpeciesReference_setSpecies_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestModifierSpeciesReference.c:124:11: warning: too many arguments for format [-Wformat-extra-args] 124 | fail( "ModifierModifierSpeciesReference_setSpecies(...) " | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 | "did not make a copy of string." ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestModifierSpeciesReference.c:140:11: warning: too many arguments for format [-Wformat-extra-args] 140 | fail( "ModifierModifierSpeciesReference_setSpecies(MSR, NULL) " | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 | "did not clear string." ); | ~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestModifierSpeciesReference.c: In function ‘void test_ModifierSpeciesReference_unsetSpecies_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestModifierSpeciesReference.c:162:11: warning: too many arguments for format [-Wformat-extra-args] 162 | fail( "ModifierModifierSpeciesReference_setSpecies(...) " | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 | "did not make a copy of string." ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestModifierSpeciesReference.c:171:11: warning: too many arguments for format [-Wformat-extra-args] 171 | fail( "ModifierModifierSpeciesReference_unsetSpecies(MSR) " | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 | "did not clear string." ); | ~~~~~~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestParameter.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestParameter.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestParameter.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestParameter.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameter.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameter.c:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameter.c:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameter.c: In function ‘void ParameterTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameter.c:70:10: warning: too many arguments for format [-Wformat-extra-args] 70 | fail("Parameter_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameter.c: In function ‘void test_Parameter_setId_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameter.c:148:10: warning: too many arguments for format [-Wformat-extra-args] 148 | fail("Parameter_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameter.c:160:10: warning: too many arguments for format [-Wformat-extra-args] 160 | fail("Parameter_setId(P, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameter.c: In function ‘void test_Parameter_setName_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameter.c:178:10: warning: too many arguments for format [-Wformat-extra-args] 178 | fail("Parameter_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameter.c:190:10: warning: too many arguments for format [-Wformat-extra-args] 190 | fail("Parameter_setName(P, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameter.c: In function ‘void test_Parameter_setUnits_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameter.c:208:10: warning: too many arguments for format [-Wformat-extra-args] 208 | fail("Parameter_setUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameter.c:220:10: warning: too many arguments for format [-Wformat-extra-args] 220 | fail("Parameter_setUnits(P, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestParameterRule.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestParameterRule.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestParameterRule.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestParameterRule.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameterRule.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameterRule.c:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameterRule.c: In function ‘void ParameterRuleTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameterRule.c:69:10: warning: too many arguments for format [-Wformat-extra-args] 69 | fail("Rule_createAssignment() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameterRule.c: In function ‘void test_ParameterRule_setName_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameterRule.c:153:11: warning: too many arguments for format [-Wformat-extra-args] 153 | fail( "ParameterRule_setName(...) did not make a copy of string." ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameterRule.c:168:11: warning: too many arguments for format [-Wformat-extra-args] 168 | fail( "Rule_setVariable(PR, NULL)" | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 | " did not clear string." ); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameterRule.c: In function ‘void test_ParameterRule_setUnits_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameterRule.c:187:11: warning: too many arguments for format [-Wformat-extra-args] 187 | fail( "Rule_setUnits(...) did not make a copy of string." ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameterRule.c:199:11: warning: too many arguments for format [-Wformat-extra-args] 199 | fail( "Rule_setUnits(PR, NULL) did not clear string." ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestParameter_newSetters.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestParameter_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestParameter_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestParameter_newSetters.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameter_newSetters.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameter_newSetters.c:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameter_newSetters.c:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameter_newSetters.c: In function ‘void ParameterTest1_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestParameter_newSetters.c:70:10: warning: too many arguments for format [-Wformat-extra-args] 70 | fail("Parameter_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestPriority.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestPriority.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestPriority.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestPriority.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestPriority.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestPriority.c:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestPriority.c:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestPriority.c: In function ‘void PriorityTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestPriority.c:68:10: warning: too many arguments for format [-Wformat-extra-args] 68 | fail("Priority_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestPriority.c: In function ‘void test_Priority_setMath_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestPriority.c:133:10: warning: too many arguments for format [-Wformat-extra-args] 133 | fail("Priority_setMath(P, NULL) did not clear ASTNode."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRateRule.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRateRule.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestRateRule.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestRateRule.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRateRule.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRateRule.c:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRateRule.c:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRateRule.c: In function ‘void RateRuleTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRateRule.c:72:10: warning: too many arguments for format [-Wformat-extra-args] 72 | fail("RateRule_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRateRule.c: In function ‘void test_RateRule_setVariable_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRateRule.c:117:10: warning: too many arguments for format [-Wformat-extra-args] 117 | fail("RateRule_setVariable(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRateRule.c:129:10: warning: too many arguments for format [-Wformat-extra-args] 129 | fail("RateRule_setVariable(RR, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRateRule.c: In function ‘void test_RateRule_unsetVariable_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRateRule.c:150:10: warning: too many arguments for format [-Wformat-extra-args] 150 | fail("RateRule_unsetVariable(RR) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReaction.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReaction.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestReaction.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReaction.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReaction.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReaction.c:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReaction.c:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReaction.c: In function ‘void ReactionTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReaction.c:68:10: warning: too many arguments for format [-Wformat-extra-args] 68 | fail("Reaction_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReaction.c: In function ‘void test_Reaction_setId_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReaction.c:158:10: warning: too many arguments for format [-Wformat-extra-args] 158 | fail("Reaction_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReaction.c:170:10: warning: too many arguments for format [-Wformat-extra-args] 170 | fail("Reaction_setId(R, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReaction.c: In function ‘void test_Reaction_setName_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReaction.c:188:10: warning: too many arguments for format [-Wformat-extra-args] 188 | fail("Reaction_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReaction.c:200:10: warning: too many arguments for format [-Wformat-extra-args] 200 | fail("Reaction_setName(R, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReaction.c: In function ‘void test_Reaction_compartment_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReaction.c:275:10: warning: too many arguments for format [-Wformat-extra-args] 275 | fail("Reaction_setCompartment(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReaction.c:287:10: warning: too many arguments for format [-Wformat-extra-args] 287 | fail("Reaction_unsetCompartment(r) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReaction_newSetters.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReaction_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestReaction_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReaction_newSetters.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReaction_newSetters.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReaction_newSetters.c:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReaction_newSetters.c:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReaction_newSetters.c: In function ‘void ReactionTest1_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReaction_newSetters.c:73:10: warning: too many arguments for format [-Wformat-extra-args] 73 | fail("Reaction_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile1.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile1.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFile1.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile1.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile1.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile1.c:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile1.c:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile1.c: In function ‘void test_read_l1v1_branch_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile1.c:80:10: warning: too many arguments for format [-Wformat-extra-args] 80 | fail("readSBML(\"l1v1-branch.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile2.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile2.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFile2.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile2.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile2.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile2.c:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile2.c:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile2.c: In function ‘void test_read_l1v1_units_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile2.c:80:10: warning: too many arguments for format [-Wformat-extra-args] 80 | fail("readSBML(\"l1v1-units.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile3.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile3.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFile3.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile3.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile3.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile3.c:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile3.c:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile3.c: In function ‘void test_read_l1v1_rules_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile3.c:81:10: warning: too many arguments for format [-Wformat-extra-args] 81 | fail("readSBML(\"l1v1-rules.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile4.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile4.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFile4.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile4.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile4.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile4.c:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile4.c:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile4.c: In function ‘void test_read_l1v1_minimal_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestReadFromFile4.c:76:10: warning: too many arguments for format [-Wformat-extra-args] 76 | fail("readSBML(\"l1v1-minimal.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRule.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRule.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestRule.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestRule.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRule.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRule.c:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRule.c:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRule.c: In function ‘void RuleTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRule.c:71:10: warning: too many arguments for format [-Wformat-extra-args] 71 | fail("Rule_createAlgebraic() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRule.c: In function ‘void test_Rule_setFormula_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRule.c:108:10: warning: too many arguments for format [-Wformat-extra-args] 108 | fail("Rule_setFormula(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRule.c:120:10: warning: too many arguments for format [-Wformat-extra-args] 120 | fail("Rule_setFormula(R, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRule.c: In function ‘void test_Rule_setMath_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRule.c:145:10: warning: too many arguments for format [-Wformat-extra-args] 145 | fail("Rule_setMath(R, NULL) did not clear ASTNode."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRule_newSetters.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRule_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestRule_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestRule_newSetters.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRule_newSetters.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRule_newSetters.c:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRule_newSetters.c:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRule_newSetters.c: In function ‘void RuleTest1_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRule_newSetters.c:73:10: warning: too many arguments for format [-Wformat-extra-args] 73 | fail("Rule_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRunner.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRunner.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestRunner.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestRunner.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestRunner.c [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConvert.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConvert.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestSBMLConvert.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSBMLConvert.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLConvert.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLConvert.c:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLDocument.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLDocument.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestSBMLDocument.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSBMLDocument.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLDocument.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLDocument.c:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLErrorLog.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLErrorLog.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestSBMLErrorLog.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSBMLErrorLog.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLErrorLog.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLErrorLog.c:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLErrorLog.c: In function ‘void test_SBMLErrorLog_type_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSBMLErrorLog.c:150:16: warning: unused variable ‘n’ [-Wunused-variable] 150 | unsigned int n = SBMLDocument_validateSBML(d); | ^ [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpecies.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpecies.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestSpecies.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSpecies.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies.c:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies.c:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies.c: In function ‘void SpeciesTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies.c:69:10: warning: too many arguments for format [-Wformat-extra-args] 69 | fail("Species_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies.c: In function ‘void test_Species_setId_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies.c:167:10: warning: too many arguments for format [-Wformat-extra-args] 167 | fail("Species_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies.c:179:10: warning: too many arguments for format [-Wformat-extra-args] 179 | fail("Species_setId(S, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies.c: In function ‘void test_Species_setName_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies.c:197:10: warning: too many arguments for format [-Wformat-extra-args] 197 | fail("Species_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies.c:209:10: warning: too many arguments for format [-Wformat-extra-args] 209 | fail("Species_setName(S, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies.c: In function ‘void test_Species_setCompartment_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies.c:227:10: warning: too many arguments for format [-Wformat-extra-args] 227 | fail("Species_setCompartment(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies.c:239:10: warning: too many arguments for format [-Wformat-extra-args] 239 | fail("Species_setComartment(S, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies.c: In function ‘void test_Species_unsetCompartment_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies.c:257:10: warning: too many arguments for format [-Wformat-extra-args] 257 | fail("Species_setCompartment(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies.c:265:10: warning: too many arguments for format [-Wformat-extra-args] 265 | fail("Species_unsetComartment(S) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies.c: In function ‘void test_Species_setSubstanceUnits_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies.c:313:10: warning: too many arguments for format [-Wformat-extra-args] 313 | fail("Species_setSubstanceUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies.c:325:10: warning: too many arguments for format [-Wformat-extra-args] 325 | fail("Species_setSubstanceUnits(S, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies.c: In function ‘void test_Species_setSpatialSizeUnits_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies.c:345:10: warning: too many arguments for format [-Wformat-extra-args] 345 | fail("Species_setSpatialSizeUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies.c:357:10: warning: too many arguments for format [-Wformat-extra-args] 357 | fail("Species_setSpatialSizeUnits(S, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies.c: In function ‘void test_Species_setUnits_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies.c:377:10: warning: too many arguments for format [-Wformat-extra-args] 377 | fail("Species_setUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies.c:389:10: warning: too many arguments for format [-Wformat-extra-args] 389 | fail("Species_setUnits(S, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesConcentrationRule.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesConcentrationRule.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestSpeciesConcentrationRule.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSpeciesConcentrationRule.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesConcentrationRule.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesConcentrationRule.c:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesConcentrationRule.c: In function ‘void SpeciesConcentrationRuleTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesConcentrationRule.c:68:10: warning: too many arguments for format [-Wformat-extra-args] 68 | fail("Rule_createAssignment() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesConcentrationRule.c: In function ‘void test_SpeciesConcentrationRule_setSpecies_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesConcentrationRule.c:148:11: warning: too many arguments for format [-Wformat-extra-args] 148 | fail( "SpeciesConcentrationRule_setSpecies(...)" | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 | " did not make a copy of string." ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesConcentrationRule.c:163:11: warning: too many arguments for format [-Wformat-extra-args] 163 | fail( "SpeciesConcentrationRule_setSpecies(SCR, NULL)" | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 | " did not clear string." ); | ~~~~~~~~~~~~~~~~~~~~~~~~ [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesReference.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesReference.c:44: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesReference.c:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesReference.c: In function ‘void SpeciesReferenceTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesReference.c:74:10: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("SpeciesReference_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesReference.c: In function ‘void test_SpeciesReference_setSpecies_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesReference.c:162:10: warning: too many arguments for format [-Wformat-extra-args] 162 | fail("SpeciesReference_setSpecies(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesReference.c:174:10: warning: too many arguments for format [-Wformat-extra-args] 174 | fail("SpeciesReference_setSpecies(SR, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesReference.c: In function ‘void test_SpeciesReference_unsetSpecies_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesReference.c:192:10: warning: too many arguments for format [-Wformat-extra-args] 192 | fail("SpeciesReference_setSpecies(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesReference.c:200:10: warning: too many arguments for format [-Wformat-extra-args] 200 | fail("SpeciesReference_unsetSpecies(SR) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesReference.c: In function ‘void test_SpeciesReference_setId_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesReference.c:218:10: warning: too many arguments for format [-Wformat-extra-args] 218 | fail("SpeciesReference_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesReference.c:230:10: warning: too many arguments for format [-Wformat-extra-args] 230 | fail("SpeciesReference_setId(SR, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference_newSetters.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference_newSetters.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesReference_newSetters.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesReference_newSetters.c:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesReference_newSetters.c:52: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesReference_newSetters.c: In function ‘void SpeciesReferenceTest1_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesReference_newSetters.c:72:10: warning: too many arguments for format [-Wformat-extra-args] 72 | fail("SpeciesReference_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesType.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesType.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestSpeciesType.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSpeciesType.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesType.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesType.c:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesType.c:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesType.c: In function ‘void SpeciesTypeTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesType.c:70:10: warning: too many arguments for format [-Wformat-extra-args] 70 | fail("SpeciesType_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesType.c: In function ‘void test_SpeciesType_setId_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesType.c:139:10: warning: too many arguments for format [-Wformat-extra-args] 139 | fail("SpeciesType_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesType.c:151:10: warning: too many arguments for format [-Wformat-extra-args] 151 | fail("SpeciesType_setId(CT, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesType.c: In function ‘void test_SpeciesType_setName_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesType.c:169:10: warning: too many arguments for format [-Wformat-extra-args] 169 | fail("SpeciesType_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesType.c:181:10: warning: too many arguments for format [-Wformat-extra-args] 181 | fail("SpeciesType_setName(CT, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesType_newSetters.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesType_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestSpeciesType_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSpeciesType_newSetters.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesType_newSetters.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesType_newSetters.c:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesType_newSetters.c:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesType_newSetters.c: In function ‘void SpeciesTypeTest1_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpeciesType_newSetters.c:69:10: warning: too many arguments for format [-Wformat-extra-args] 69 | fail("SpeciesType_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpecies_newSetters.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpecies_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestSpecies_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSpecies_newSetters.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies_newSetters.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies_newSetters.c:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies_newSetters.c:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies_newSetters.c: In function ‘void SpeciesTest1_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSpecies_newSetters.c:69:10: warning: too many arguments for format [-Wformat-extra-args] 69 | fail("Species_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestStoichiometryMath.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestStoichiometryMath.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestStoichiometryMath.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestStoichiometryMath.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestStoichiometryMath.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestStoichiometryMath.c:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestStoichiometryMath.c:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestStoichiometryMath.c: In function ‘void StoichiometryMathTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestStoichiometryMath.c:72:10: warning: too many arguments for format [-Wformat-extra-args] 72 | fail("StoichiometryMath_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestStoichiometryMath.c: In function ‘void test_StoichiometryMath_setMath_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestStoichiometryMath.c:166:10: warning: too many arguments for format [-Wformat-extra-args] 166 | fail("StoichiometryMath_setMath(D, NULL) did not clear ASTNode."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSyntaxChecker.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSyntaxChecker.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestSyntaxChecker.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSyntaxChecker.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestSyntaxChecker.c [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestTrigger.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestTrigger.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestTrigger.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestTrigger.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestTrigger.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaParser.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestTrigger.c:43: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestTrigger.c:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestTrigger.c: In function ‘void TriggerTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestTrigger.c:70:10: warning: too many arguments for format [-Wformat-extra-args] 70 | fail("Trigger_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestTrigger.c: In function ‘void test_Trigger_setMath_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestTrigger.c:164:10: warning: too many arguments for format [-Wformat-extra-args] 164 | fail("Trigger_setMath(D, NULL) did not clear ASTNode."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnit.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnit.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestUnit.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestUnit.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestUnit.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestUnit.c:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestUnit.c:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestUnit.c: In function ‘void UnitTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestUnit.c:70:10: warning: too many arguments for format [-Wformat-extra-args] 70 | fail("Unit_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestUnitDefinition.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestUnitDefinition.c:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestUnitDefinition.c:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestUnitDefinition.c: In function ‘void UnitDefinitionTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestUnitDefinition.c:68:10: warning: too many arguments for format [-Wformat-extra-args] 68 | fail("UnitDefinition_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestUnitDefinition.c: In function ‘void test_UnitDefinition_setId_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestUnitDefinition.c:164:10: warning: too many arguments for format [-Wformat-extra-args] 164 | fail("UnitDefinition_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestUnitDefinition.c:176:10: warning: too many arguments for format [-Wformat-extra-args] 176 | fail("UnitDefinition_setId(R, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestUnitDefinition.c: In function ‘void test_UnitDefinition_setName_fn(int)’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestUnitDefinition.c:194:10: warning: too many arguments for format [-Wformat-extra-args] 194 | fail("UnitDefinition_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestUnitDefinition.c:206:10: warning: too many arguments for format [-Wformat-extra-args] 206 | fail("UnitDefinition_setName(R, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition_newSetters.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition_newSetters.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestUnitDefinition_newSetters.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestUnitDefinition_newSetters.c:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestUnitDefinition_newSetters.c:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestUnitDefinition_newSetters.c: In function ‘void UnitDefinitionTest1_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestUnitDefinition_newSetters.c:69:10: warning: too many arguments for format [-Wformat-extra-args] 69 | fail("UnitDefinition_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnitKind.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnitKind.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestUnitKind.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestUnitKind.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestUnitKind.c [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnit_newSetters.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnit_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestUnit_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestUnit_newSetters.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestUnit_newSetters.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestUnit_newSetters.c:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestUnit_newSetters.c:49: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestUnit_newSetters.c: In function ‘void UnitTest1_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/test/TestUnit_newSetters.c:68:10: warning: too many arguments for format [-Wformat-extra-args] 68 | fail("Unit_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 95%] Linking CXX executable test_sbml_sbml cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_sbml.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test_sbml_sbml.dir/link.d CMakeFiles/test_sbml_sbml.dir/TestAncestor.cpp.o CMakeFiles/test_sbml_sbml.dir/TestAttributeFunctions.cpp.o CMakeFiles/test_sbml_sbml.dir/TestConsistencyChecks.cpp.o CMakeFiles/test_sbml_sbml.dir/TestCopyAndClone.cpp.o 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CMakeFiles/test_sbml_sbml.dir/TestParameterRule.c.o CMakeFiles/test_sbml_sbml.dir/TestParameter_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestPriority.c.o CMakeFiles/test_sbml_sbml.dir/TestRateRule.c.o CMakeFiles/test_sbml_sbml.dir/TestReaction.c.o CMakeFiles/test_sbml_sbml.dir/TestReaction_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile1.c.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile2.c.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile3.c.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile4.c.o CMakeFiles/test_sbml_sbml.dir/TestRule.c.o CMakeFiles/test_sbml_sbml.dir/TestRule_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestRunner.c.o CMakeFiles/test_sbml_sbml.dir/TestSBMLConvert.c.o CMakeFiles/test_sbml_sbml.dir/TestSBMLDocument.c.o CMakeFiles/test_sbml_sbml.dir/TestSBMLErrorLog.c.o CMakeFiles/test_sbml_sbml.dir/TestSpecies.c.o CMakeFiles/test_sbml_sbml.dir/TestSpeciesConcentrationRule.c.o CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference.c.o CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestSpeciesType.c.o CMakeFiles/test_sbml_sbml.dir/TestSpeciesType_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestSpecies_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestStoichiometryMath.c.o CMakeFiles/test_sbml_sbml.dir/TestSyntaxChecker.c.o CMakeFiles/test_sbml_sbml.dir/TestTrigger.c.o CMakeFiles/test_sbml_sbml.dir/TestUnit.c.o CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition.c.o CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestUnitKind.c.o CMakeFiles/test_sbml_sbml.dir/TestUnit_newSetters.c.o -o test_sbml_sbml ../../libsbml-static.a /usr/lib/riscv64-linux-gnu/libcheck.a /usr/lib/riscv64-linux-gnu/libbz2.so /usr/lib/riscv64-linux-gnu/libxml2.so /usr/lib/riscv64-linux-gnu/libz.so -lm -pthread -lrt -lsubunit make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 95%] Built target test_sbml_sbml make -f src/sbml/units/test/CMakeFiles/test_sbml_units.dir/build.make src/sbml/units/test/CMakeFiles/test_sbml_units.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/test /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/units/test /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/units/test/CMakeFiles/test_sbml_units.dir/DependInfo.cmake "--color=" test_sbml_units make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/sbml/units/test/CMakeFiles/test_sbml_units.dir/build.make src/sbml/units/test/CMakeFiles/test_sbml_units.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 95%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestCalculatedUnitDefinitions.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestCalculatedUnitDefinitions.cpp.o -MF CMakeFiles/test_sbml_units.dir/TestCalculatedUnitDefinitions.cpp.o.d -o CMakeFiles/test_sbml_units.dir/TestCalculatedUnitDefinitions.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/test/TestCalculatedUnitDefinitions.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/test/TestCalculatedUnitDefinitions.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 95%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions.cpp.o -MF CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions.cpp.o.d -o CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/test/TestDerivedUnitDefinitions.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/test/TestDerivedUnitDefinitions.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 95%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions_undefined.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions_undefined.cpp.o -MF CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions_undefined.cpp.o.d -o CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions_undefined.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/test/TestDerivedUnitDefinitions_undefined.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/test/TestDerivedUnitDefinitions_undefined.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 95%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData.cpp.o -MF CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData.cpp.o.d -o CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/test/TestFormulaUnitsData.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/test/TestFormulaUnitsData.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 95%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData_map.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData_map.cpp.o -MF CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData_map.cpp.o.d -o CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData_map.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/test/TestFormulaUnitsData_map.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/test/TestFormulaUnitsData_map.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 96%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter.cpp.o -MF CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter.cpp.o.d -o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/test/TestUnitFormulaFormatter.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/test/TestUnitFormulaFormatter.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 96%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter1.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter1.cpp.o -MF CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter1.cpp.o.d -o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter1.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/test/TestUnitFormulaFormatter1.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/test/TestUnitFormulaFormatter1.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 96%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter2.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter2.cpp.o -MF CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter2.cpp.o.d -o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter2.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/test/TestUnitFormulaFormatter2.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/test/TestUnitFormulaFormatter2.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 96%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter3.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter3.cpp.o -MF CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter3.cpp.o.d -o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter3.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/test/TestUnitFormulaFormatter3.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/test/TestUnitFormulaFormatter3.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 96%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUtilsUnit.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUtilsUnit.cpp.o -MF CMakeFiles/test_sbml_units.dir/TestUtilsUnit.cpp.o.d -o CMakeFiles/test_sbml_units.dir/TestUtilsUnit.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/test/TestUtilsUnit.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/test/TestUtilsUnit.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 96%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUtilsUnitDefinition.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUtilsUnitDefinition.cpp.o -MF CMakeFiles/test_sbml_units.dir/TestUtilsUnitDefinition.cpp.o.d -o CMakeFiles/test_sbml_units.dir/TestUtilsUnitDefinition.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/test/TestUtilsUnitDefinition.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/test/TestUtilsUnitDefinition.cpp:46: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 96%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestRunner.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestRunner.c.o -MF CMakeFiles/test_sbml_units.dir/TestRunner.c.o.d -o CMakeFiles/test_sbml_units.dir/TestRunner.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/test/TestRunner.c [ 96%] Linking CXX executable test_sbml_units cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/units/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_units.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test_sbml_units.dir/link.d CMakeFiles/test_sbml_units.dir/TestCalculatedUnitDefinitions.cpp.o CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions.cpp.o CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions_undefined.cpp.o CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData.cpp.o CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData_map.cpp.o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter.cpp.o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter1.cpp.o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter2.cpp.o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter3.cpp.o CMakeFiles/test_sbml_units.dir/TestUtilsUnit.cpp.o CMakeFiles/test_sbml_units.dir/TestUtilsUnitDefinition.cpp.o CMakeFiles/test_sbml_units.dir/TestRunner.c.o -o test_sbml_units ../../../libsbml-static.a /usr/lib/riscv64-linux-gnu/libcheck.a /usr/lib/riscv64-linux-gnu/libbz2.so /usr/lib/riscv64-linux-gnu/libxml2.so /usr/lib/riscv64-linux-gnu/libz.so -lm -pthread -lrt -lsubunit make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 96%] Built target test_sbml_units make -f src/sbml/util/test/CMakeFiles/test_sbml_util.dir/build.make src/sbml/util/test/CMakeFiles/test_sbml_util.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/util/test /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/util/test/CMakeFiles/test_sbml_util.dir/DependInfo.cmake "--color=" test_sbml_util make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/sbml/util/test/CMakeFiles/test_sbml_util.dir/build.make src/sbml/util/test/CMakeFiles/test_sbml_util.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 96%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestList.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/util/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestList.c.o -MF CMakeFiles/test_sbml_util.dir/TestList.c.o.d -o CMakeFiles/test_sbml_util.dir/TestList.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestList.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestList.c:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestList.c: In function ‘ListTest_setup’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestList.c:58:10: warning: too many arguments for format [-Wformat-extra-args] 58 | fail("List_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 96%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestMemory.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/util/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestMemory.c.o -MF CMakeFiles/test_sbml_util.dir/TestMemory.c.o.d -o CMakeFiles/test_sbml_util.dir/TestMemory.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestMemory.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestMemory.c:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestMemory.c: In function ‘test_memory_safe_malloc_fn’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestMemory.c:64:10: warning: too many arguments for format [-Wformat-extra-args] 64 | fail("safe_malloc() should not return NULL"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 96%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestRunner.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/util/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestRunner.c.o -MF CMakeFiles/test_sbml_util.dir/TestRunner.c.o.d -o CMakeFiles/test_sbml_util.dir/TestRunner.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestRunner.c [ 96%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestStack.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/util/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestStack.c.o -MF CMakeFiles/test_sbml_util.dir/TestStack.c.o.d -o CMakeFiles/test_sbml_util.dir/TestStack.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestStack.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestStack.c:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestStack.c: In function ‘StackTest_setup’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestStack.c:58:10: warning: too many arguments for format [-Wformat-extra-args] 58 | fail("Stack_create(10) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 97%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestStringBuffer.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/util/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestStringBuffer.c.o -MF CMakeFiles/test_sbml_util.dir/TestStringBuffer.c.o.d -o CMakeFiles/test_sbml_util.dir/TestStringBuffer.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestStringBuffer.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestStringBuffer.c:42: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestStringBuffer.c: In function ‘StringBufferTest_setup’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestStringBuffer.c:59:10: warning: too many arguments for format [-Wformat-extra-args] 59 | fail("StringBuffer_create(10) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestStringBuffer.c: In function ‘test_StringBuffer_toString_fn’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestStringBuffer.c:357:10: warning: too many arguments for format [-Wformat-extra-args] 357 | fail("StringBuffer_toString() did not make a copy of its internal buffer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 97%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestUtil.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/util/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestUtil.c.o -MF CMakeFiles/test_sbml_util.dir/TestUtil.c.o.d -o CMakeFiles/test_sbml_util.dir/TestUtil.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestUtil.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestUtil.c:55: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestUtil.c: In function ‘test_util_NaN_fn’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestUtil.c:269:24: warning: too many arguments for format [-Wformat-extra-args] 269 | fail_unless( d != d, "util_NaN() did not return NaN."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestUtil.c: In function ‘test_util_NegInf_fn’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestUtil.c:281:10: warning: too many arguments for format [-Wformat-extra-args] 281 | fail("util_NegInf() did not return -Inf."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestUtil.c: In function ‘test_util_PosInf_fn’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestUtil.c:294:10: warning: too many arguments for format [-Wformat-extra-args] 294 | fail("util_PosInf() did not return +Inf."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestUtil.c: In function ‘test_util_NegZero_fn’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/test/TestUtil.c:305:23: warning: too many arguments for format [-Wformat-extra-args] 305 | fail_unless(d == 0, "util_NegZero() did not even return a zero!"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 97%] Linking CXX executable test_sbml_util cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/util/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_util.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test_sbml_util.dir/link.d CMakeFiles/test_sbml_util.dir/TestList.c.o CMakeFiles/test_sbml_util.dir/TestMemory.c.o CMakeFiles/test_sbml_util.dir/TestRunner.c.o CMakeFiles/test_sbml_util.dir/TestStack.c.o CMakeFiles/test_sbml_util.dir/TestStringBuffer.c.o CMakeFiles/test_sbml_util.dir/TestUtil.c.o -o test_sbml_util ../../../libsbml-static.a /usr/lib/riscv64-linux-gnu/libcheck.a /usr/lib/riscv64-linux-gnu/libbz2.so /usr/lib/riscv64-linux-gnu/libxml2.so /usr/lib/riscv64-linux-gnu/libz.so -lm -pthread -lrt -lsubunit make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 97%] Built target test_sbml_util make -f src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/build.make src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/test /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/validator/test /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/DependInfo.cmake "--color=" test_sbml_validator make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/build.make src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 97%] Building CXX object src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/TestConsistencyValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/test/.. -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/TestConsistencyValidator.cpp.o -MF CMakeFiles/test_sbml_validator.dir/TestConsistencyValidator.cpp.o.d -o CMakeFiles/test_sbml_validator.dir/TestConsistencyValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/test/TestConsistencyValidator.cpp [ 97%] Building CXX object src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/TestFile.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/test/.. -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/TestFile.cpp.o -MF CMakeFiles/test_sbml_validator.dir/TestFile.cpp.o.d -o CMakeFiles/test_sbml_validator.dir/TestFile.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/test/TestFile.cpp [ 97%] Building CXX object src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/TestValidator.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/test/.. -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/TestValidator.cpp.o -MF CMakeFiles/test_sbml_validator.dir/TestValidator.cpp.o.d -o CMakeFiles/test_sbml_validator.dir/TestValidator.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/test/TestValidator.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/validator/test/TestValidator.cpp:51: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ [ 97%] Linking CXX executable test_sbml_validator cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_validator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test_sbml_validator.dir/link.d CMakeFiles/test_sbml_validator.dir/TestConsistencyValidator.cpp.o CMakeFiles/test_sbml_validator.dir/TestFile.cpp.o CMakeFiles/test_sbml_validator.dir/TestValidator.cpp.o -o test_sbml_validator ../../../libsbml-static.a /usr/lib/riscv64-linux-gnu/libcheck.a /usr/lib/riscv64-linux-gnu/libbz2.so /usr/lib/riscv64-linux-gnu/libxml2.so /usr/lib/riscv64-linux-gnu/libz.so -lm -pthread -lrt -lsubunit make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 97%] Built target test_sbml_validator make -f src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/build.make src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/xml/test /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/DependInfo.cmake "--color=" test_sbml_xml make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/build.make src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 97%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestCopyAndClone.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/include/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/.. -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestCopyAndClone.cpp.o -MF CMakeFiles/test_sbml_xml.dir/TestCopyAndClone.cpp.o.d -o CMakeFiles/test_sbml_xml.dir/TestCopyAndClone.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/TestCopyAndClone.cpp [ 97%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLAttributes.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/include/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/.. -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLAttributes.cpp.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLAttributes.cpp.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLAttributes.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/TestXMLAttributes.cpp [ 97%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLError.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml 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-I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/include/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/.. -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLError.cpp.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLError.cpp.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLError.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/TestXMLError.cpp [ 97%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLExceptions.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/include/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/.. -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLExceptions.cpp.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLExceptions.cpp.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLExceptions.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/TestXMLExceptions.cpp [ 97%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLNode.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/include/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/.. -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLNode.cpp.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLNode.cpp.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLNode.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/TestXMLNode.cpp [ 98%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestRunner.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/include/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/.. -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestRunner.c.o -MF CMakeFiles/test_sbml_xml.dir/TestRunner.c.o.d -o CMakeFiles/test_sbml_xml.dir/TestRunner.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/TestRunner.c [ 98%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLAttributesC.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/include/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/.. -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLAttributesC.c.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLAttributesC.c.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLAttributesC.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/TestXMLAttributesC.c [ 98%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLErrorC.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/include/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/.. -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLErrorC.c.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLErrorC.c.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLErrorC.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/TestXMLErrorC.c [ 98%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLErrorLog.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/include/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/.. -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLErrorLog.c.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLErrorLog.c.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLErrorLog.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/TestXMLErrorLog.c [ 98%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLInputStream.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/include/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/.. -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLInputStream.c.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLInputStream.c.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLInputStream.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/TestXMLInputStream.c [ 98%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLNamespaces.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/include/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/.. -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLNamespaces.c.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLNamespaces.c.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLNamespaces.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/TestXMLNamespaces.c In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/TestXMLNamespaces.c:45: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/TestXMLNamespaces.c: In function ‘void XMLNamespacesTest_setup()’: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/TestXMLNamespaces.c:61:10: warning: too many arguments for format [-Wformat-extra-args] 61 | fail("XMLNamespacesTest_setup() failed to create a XMLNamespaces object."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 98%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLNode_newSetters.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/include/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/.. -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLNode_newSetters.c.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLNode_newSetters.c.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLNode_newSetters.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/TestXMLNode_newSetters.c [ 98%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLOutputStream.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/include/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/.. -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLOutputStream.c.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLOutputStream.c.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLOutputStream.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/TestXMLOutputStream.c [ 98%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLToken.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/include/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/.. -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLToken.c.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLToken.c.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLToken.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/TestXMLToken.c [ 98%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLToken_newSetters.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/include/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/.. -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLToken_newSetters.c.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLToken_newSetters.c.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLToken_newSetters.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/TestXMLToken_newSetters.c [ 98%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLTriple.c.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/include/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/.. -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wall -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLTriple.c.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLTriple.c.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLTriple.c.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/test/TestXMLTriple.c [ 99%] Linking CXX executable test_sbml_xml cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/sbml/xml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_xml.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test_sbml_xml.dir/link.d CMakeFiles/test_sbml_xml.dir/TestCopyAndClone.cpp.o CMakeFiles/test_sbml_xml.dir/TestXMLAttributes.cpp.o CMakeFiles/test_sbml_xml.dir/TestXMLError.cpp.o CMakeFiles/test_sbml_xml.dir/TestXMLExceptions.cpp.o CMakeFiles/test_sbml_xml.dir/TestXMLNode.cpp.o CMakeFiles/test_sbml_xml.dir/TestRunner.c.o CMakeFiles/test_sbml_xml.dir/TestXMLAttributesC.c.o CMakeFiles/test_sbml_xml.dir/TestXMLErrorC.c.o CMakeFiles/test_sbml_xml.dir/TestXMLErrorLog.c.o CMakeFiles/test_sbml_xml.dir/TestXMLInputStream.c.o CMakeFiles/test_sbml_xml.dir/TestXMLNamespaces.c.o CMakeFiles/test_sbml_xml.dir/TestXMLNode_newSetters.c.o CMakeFiles/test_sbml_xml.dir/TestXMLOutputStream.c.o CMakeFiles/test_sbml_xml.dir/TestXMLToken.c.o CMakeFiles/test_sbml_xml.dir/TestXMLToken_newSetters.c.o CMakeFiles/test_sbml_xml.dir/TestXMLTriple.c.o -o test_sbml_xml ../../../libsbml-static.a /usr/lib/riscv64-linux-gnu/libcheck.a /usr/lib/riscv64-linux-gnu/libbz2.so /usr/lib/riscv64-linux-gnu/libxml2.so /usr/lib/riscv64-linux-gnu/libz.so -lm -pthread -lrt -lsubunit make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 99%] Built target test_sbml_xml make -f src/bindings/java/CMakeFiles/binding_java_swig.dir/build.make src/bindings/java/CMakeFiles/binding_java_swig.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/java /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/java/CMakeFiles/binding_java_swig.dir/DependInfo.cmake "--color=" binding_java_swig make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/bindings/java/CMakeFiles/binding_java_swig.dir/build.make src/bindings/java/CMakeFiles/binding_java_swig.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 99%] Swig Java source cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/java && /usr/bin/cmake -DCUR_BIN_DIRECTORY="/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/java" -DBIN_DIRECTORY="/build/reproducible-path/libsbml-5.20.5+dfsg/build" -DCUR_SRC_DIRECTORY="/build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java" -DSRC_DIRECTORY="/build/reproducible-path/libsbml-5.20.5+dfsg" -DCMAKE_COMMAND="/usr/bin/cmake" -DPYTHON_EXECUTABLE="/usr/bin/python3.13" -DSWIG_SWIGDOCDEFINES="--define USE_COMP --define USE_FBC --define USE_GROUPS --define USE_L3V2EXTENDEDMATH --define USE_LAYOUT --define USE_QUAL --define USE_RENDER --define USE_COMP --define USE_FBC --define USE_GROUPS --define USE_L3V2EXTENDEDMATH --define USE_QUAL --define USE_RENDER" -DSWIG_ARGS="-DLIBSBML_COMPILED_IN_SRC -DUSE_LIBXML -DUSE_BZ2 -DUSE_ZLIB -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_QUAL -DUSE_RENDER -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_QUAL -DUSE_RENDER" -DSWIG_EXECUTABLE="/usr/bin/swig" -DWITH_DOXYGEN="ON" -DLIB_NAME="" -P /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/java/swig-binding.cmake Swig: Java Bindings Creating class-list.txt /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/java/libsbmlutils.py:134: SyntaxWarning: invalid escape sequence '\s' match = re.search('(@class|@enum)\s+(\w+)', line) /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/java/libsbmlutils.py:144: SyntaxWarning: invalid escape sequence '\s' match = re.search('%template\s*\(([^)]+)\)', line) Creating libsbml-converters.txt Creating javadoc.i /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:447: SyntaxWarning: invalid escape sequence '\s' p = re.compile('(\s+?)\*/', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:502: SyntaxWarning: invalid escape sequence '\*' docstring = re.sub('/\*\*(\s+\*)+', r'/** \n *', docstring) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:506: SyntaxWarning: invalid escape sequence '\*' docstring = re.sub('\*/', r'* @internal\n */', docstring) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:851: SyntaxWarning: invalid escape sequence '\W' p = re.compile('(\W+)(\w+?)::(\w+\s*\([^)]*?\))') /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:994: SyntaxWarning: invalid escape sequence '\s' p = re.compile('@link\s*\*?\s+(\w+)?#(\w+)\s*\*?\s+(\w+)\s*@endlink') /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1010: SyntaxWarning: invalid escape sequence '\s' p = re.compile('^\s*\*\s+@par(\s)', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1015: SyntaxWarning: invalid escape sequence '\s' p = re.compile('(@if|@ifnot)[\s*]+(\w+)[\s*]+(.+?)((@else)\s+(.+?))?@endif', re.DOTALL) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1024: SyntaxWarning: invalid escape sequence '\s' p = re.compile('^(\s+)\*\s*$', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1026: SyntaxWarning: invalid escape sequence '\s' p = re.compile('^((?!\s+\Z)\s+)$', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1028: SyntaxWarning: invalid escape sequence '\Z' p = re.compile('^(?!\Z)$', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1041: SyntaxWarning: invalid escape sequence '\s' p = re.compile('@section\s+[^\s]+\s+(.*)$', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1043: SyntaxWarning: invalid escape sequence '\s' p = re.compile('@subsection\s+[^\s]+\s+(.*)$', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1045: SyntaxWarning: invalid escape sequence '\s' p = re.compile('@subsubsection\s+[^\s]+\s+(.*)$', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1051: SyntaxWarning: invalid escape sequence '\s' p = re.compile('@image\s+html+\s+([^\s]+).*$', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1053: SyntaxWarning: invalid escape sequence '\s' p = re.compile('@image\s+latex+\s+([^\s]+).*$', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1075: SyntaxWarning: invalid escape sequence '\*' docstring = re.sub('@c(\n[ \t]*\*[ \t]*)([^ ,;()/*\n\t<]+)', r'\1\2', docstring) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1077: SyntaxWarning: invalid escape sequence '\*' docstring = re.sub('@p(\n[ \t]*\*[ \t]+)([^ ,.:;()/*\n\t<]+)', r'\1\2', docstring) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1079: SyntaxWarning: invalid escape sequence '\*' docstring = re.sub('@em(\n[ \t]*\*[ \t]*)([^ ,.:;()/*\n\t<]+)', r'\1\2', docstring) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1085: SyntaxWarning: invalid escape sequence '\s' p = re.compile('^(\s+\*\s+)(@li\s+.*?)(\s+)(\*/|

\s+\*\s+(?!@li\s))', re.MULTILINE|re.DOTALL) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1090: SyntaxWarning: invalid escape sequence '\s' p = re.compile('^(\s+\*\s+)(@deprecated\s)((\S|\s)+?)(

|\*/)', re.MULTILINE|re.DOTALL) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1111: SyntaxWarning: invalid escape sequence '\s' p = re.compile('^(\s+)\*\s+\*\s+@', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1114: SyntaxWarning: invalid escape sequence '\s' p = re.compile('^(\s*)\*\s*

', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1116: SyntaxWarning: invalid escape sequence '\s' p = re.compile('^(\s*)\*?\s*

((\s+\*)+\s+

)+', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1119: SyntaxWarning: invalid escape sequence '\s' p = re.compile('

([\s*]*

)+', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1142: SyntaxWarning: invalid escape sequence '\s' p = re.compile('@ref\s+\*?\s*(\w+)', re.DOTALL) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1227: SyntaxWarning: invalid escape sequence '\s' docstring = re.sub('(@see\s+\w+)::', r'\1#', docstring) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1235: SyntaxWarning: invalid escape sequence '\s' docstring = re.sub('(@see\s+)([\w:.]+)\(', r'\1#\2(', docstring) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1254: SyntaxWarning: invalid escape sequence '\s' p = re.compile('@link([\s/*]+[\w\s,.:#()*]+[\s/*]*[\w():#]+[\s/*]*)@endlink', re.DOTALL) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1284: SyntaxWarning: invalid escape sequence '\s' p = re.compile('@par(\s)', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1430: SyntaxWarning: invalid escape sequence '\s' p = re.compile('(\s+)(\S+?)::(\w+\s*)(\([^)]*?\))', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1432: SyntaxWarning: invalid escape sequence '\s' p = re.compile('(@see\s+)(\w+\s*)(\([^)]*?\))') /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1452: SyntaxWarning: invalid escape sequence '\s' p = re.compile('^\s+(\S*\s*)', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1456: SyntaxWarning: invalid escape sequence '\S' p = re.compile('^[ \t]+(\S)', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1472: SyntaxWarning: invalid escape sequence '\*' docstring = re.sub('@c(\n[ \t]*\*[ \t]*)([^ ,.:;()/*\n\t<]+)', r'\1C<\2>', docstring) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1474: SyntaxWarning: invalid escape sequence '\*' docstring = re.sub('@p(\n[ \t]*\*[ \t]+)([^ ,.:;()/*\n\t<]+)', r'\1C<\2>', docstring) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1476: SyntaxWarning: invalid escape sequence '\*' docstring = re.sub('@em(\n[ \t]*\*[ \t]*)([^ ,.:;()/*\n\t<]+)', r'\1I<\2>', docstring) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1743: SyntaxWarning: invalid escape sequence '\s' p = re.compile('@copy(details|doc)\s+(\w+)') /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1755: SyntaxWarning: invalid escape sequence '\s' p = re.compile('@htmlinclude\s+(\*\s+)*([-\w."\']+)', re.DOTALL) #' /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1760: SyntaxWarning: invalid escape sequence '\*' p = re.compile('^([ \t]*\*)[ \t]+\*[ \t]*$', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1762: SyntaxWarning: invalid escape sequence '\*' p = re.compile('^([ \t]*\*[ \t]*)\n[ \t]*\*[ \t]*\n[ \t]*\*[ \t]*@li', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/swig/libsbmlutils.py:134: SyntaxWarning: invalid escape sequence '\s' match = re.search('(@class|@enum)\s+(\w+)', line) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/swig/libsbmlutils.py:144: SyntaxWarning: invalid escape sequence '\s' match = re.search('%template\s*\(([^)]+)\)', line) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/swigdoc.py:1167: DeprecationWarning: 'count' is passed as positional argument return re.sub(r'', '', docstring, re.DOTALL|re.MULTILINE) Warning: cannot expand common-text: pkg-marker-l3v2extendedmath.html [Errno 2] No such file or directory: '/build/reproducible-path/libsbml-5.20.5+dfsg/docs/src/common-text/pkg-marker-l3v2extendedmath.html' Warning: cannot expand common-text: pkg-marker-l3v2extendedmath.html [Errno 2] No such file or directory: '/build/reproducible-path/libsbml-5.20.5+dfsg/docs/src/common-text/pkg-marker-l3v2extendedmath.html' Warning: cannot expand common-text: pkg-marker-l3v2extendedmath.html [Errno 2] No such file or directory: '/build/reproducible-path/libsbml-5.20.5+dfsg/docs/src/common-text/pkg-marker-l3v2extendedmath.html' Warning: cannot expand common-text: pkg-marker-l3v2extendedmath.html [Errno 2] No such file or directory: '/build/reproducible-path/libsbml-5.20.5+dfsg/docs/src/common-text/pkg-marker-l3v2extendedmath.html' /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/util/IdList.h:123: Warning 468: No 'throws' typemap defined for exception type '...' /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:2556: Warning 468: No 'throws' typemap defined for exception type '...' /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:2556: Warning 468: No 'throws' typemap defined for exception type '...' /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3182: Warning 468: No 'throws' typemap defined for exception type '...' /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3190: Warning 468: No 'throws' typemap defined for exception type '...' make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 99%] Built target binding_java_swig make -f src/bindings/java/CMakeFiles/binding_java_lib.dir/build.make src/bindings/java/CMakeFiles/binding_java_lib.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/java /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/java/CMakeFiles/binding_java_lib.dir/DependInfo.cmake "--color=" binding_java_lib make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/bindings/java/CMakeFiles/binding_java_lib.dir/build.make src/bindings/java/CMakeFiles/binding_java_lib.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 99%] Building CXX object src/bindings/java/CMakeFiles/binding_java_lib.dir/libsbml_wrap.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/java && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dbinding_java_lib_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig -I/build/reproducible-path/libsbml-5.20.5+dfsg/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/bindings/java/CMakeFiles/binding_java_lib.dir/libsbml_wrap.cpp.o -MF CMakeFiles/binding_java_lib.dir/libsbml_wrap.cpp.o.d -o CMakeFiles/binding_java_lib.dir/libsbml_wrap.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/java/libsbml_wrap.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/libsbml.h:55, from /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/java/libsbml_wrap.cpp:840: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/libsbml.h:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/comp-package.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/java/../swig/libsbml-packages.h:4, from /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/java/libsbml_wrap.cpp:844: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/comp-package.h:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/comp-package.h:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/layout-package.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/java/../swig/libsbml-packages.h:10: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/layout-package.h:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/layout-package.h:54: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/layout-package.h:57: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/../swig/layout-package.h:58: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:329:26: note: by ‘virtual GeneralGlyph& GeneralGlyph::operator=(const GeneralGlyph&)’ 329 | virtual GeneralGlyph& operator=(const GeneralGlyph& source); | ^~~~~~~~ [ 99%] Linking CXX shared library libsbmlj.so cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/java && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_java_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/binding_java_lib.dir/link.d -Wl,-soname,libsbmlj.so -o libsbmlj.so CMakeFiles/binding_java_lib.dir/libsbml_wrap.cpp.o ../../libsbml-static.a /usr/lib/riscv64-linux-gnu/libbz2.so /usr/lib/riscv64-linux-gnu/libxml2.so /usr/lib/riscv64-linux-gnu/libz.so -lm make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 99%] Built target binding_java_lib make -f src/bindings/java/CMakeFiles/binding_java_jar.dir/build.make src/bindings/java/CMakeFiles/binding_java_jar.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/java /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/java/CMakeFiles/binding_java_jar.dir/DependInfo.cmake "--color=" binding_java_jar make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/bindings/java/CMakeFiles/binding_java_jar.dir/build.make src/bindings/java/CMakeFiles/binding_java_jar.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 99%] Building: libsbml.jar cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/java && /usr/bin/cmake -E make_directory /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/java/test cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/java && /usr/bin/cmake -DJava_JAVAC_EXECUTABLE="/usr/bin/javac" -DJava_JAR_EXECUTABLE="/usr/bin/jar" -DBIN_DIRECTORY="/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/java" -DSRC_DIRECTORY="/build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java" -DFILE_SEP=":" -DPATH_SEP=/ -DCOMPATIBILIY= -P /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/compile-native-files.cmake Creating: libsbml.jar added manifest adding: org/sbml/libsbml/ASTBasePlugin.class(in = 9179) (out= 2829)(deflated 69%) adding: org/sbml/libsbml/ASTNode.class(in = 18147) (out= 5400)(deflated 70%) adding: org/sbml/libsbml/ASTNodeList.class(in = 1839) (out= 931)(deflated 49%) adding: org/sbml/libsbml/ASTNodeValues_t.class(in = 2940) (out= 1123)(deflated 61%) adding: org/sbml/libsbml/AlgebraicRule.class(in = 1830) (out= 908)(deflated 50%) adding: org/sbml/libsbml/AssignmentRule.class(in = 2070) (out= 979)(deflated 52%) adding: org/sbml/libsbml/Association.class(in = 5584) (out= 1959)(deflated 64%) adding: org/sbml/libsbml/BoundingBox.class(in = 7240) (out= 2401)(deflated 66%) adding: org/sbml/libsbml/CVTerm.class(in = 4761) (out= 1757)(deflated 63%) adding: org/sbml/libsbml/CVTermList.class(in = 1821) (out= 925)(deflated 49%) adding: org/sbml/libsbml/Callback.class(in = 1680) (out= 875)(deflated 47%) adding: org/sbml/libsbml/CallbackRegistry.class(in = 1767) (out= 830)(deflated 53%) adding: org/sbml/libsbml/CobraToFbcConverter.class(in = 2311) (out= 1014)(deflated 56%) adding: org/sbml/libsbml/ColorDefinition.class(in = 7407) (out= 2358)(deflated 68%) adding: org/sbml/libsbml/CompBase.class(in = 1538) (out= 785)(deflated 48%) adding: org/sbml/libsbml/CompExtension.class(in = 5936) (out= 2402)(deflated 59%) adding: org/sbml/libsbml/CompFlatteningConverter.class(in = 2326) (out= 1016)(deflated 56%) adding: org/sbml/libsbml/CompModelPlugin.class(in = 6860) (out= 2226)(deflated 67%) adding: org/sbml/libsbml/CompPkgNamespaces.class(in = 2400) (out= 1067)(deflated 55%) adding: org/sbml/libsbml/CompSBMLDocumentPlugin.class(in = 8057) (out= 2336)(deflated 71%) adding: org/sbml/libsbml/CompSBasePlugin.class(in = 5665) (out= 1848)(deflated 67%) adding: org/sbml/libsbml/Compartment.class(in = 6887) (out= 2258)(deflated 67%) adding: org/sbml/libsbml/CompartmentGlyph.class(in = 4973) (out= 1708)(deflated 65%) adding: org/sbml/libsbml/CompartmentType.class(in = 3012) (out= 1215)(deflated 59%) adding: org/sbml/libsbml/Constraint.class(in = 4605) (out= 1681)(deflated 63%) adding: org/sbml/libsbml/ConversionOption.class(in = 5625) (out= 1718)(deflated 69%) adding: org/sbml/libsbml/ConversionProperties.class(in = 8183) (out= 2165)(deflated 73%) adding: org/sbml/libsbml/CubicBezier.class(in = 6218) (out= 2075)(deflated 66%) adding: org/sbml/libsbml/Curve.class(in = 4510) (out= 1757)(deflated 61%) adding: org/sbml/libsbml/Date.class(in = 4816) (out= 1876)(deflated 61%) adding: org/sbml/libsbml/DateList.class(in = 1785) (out= 926)(deflated 48%) adding: org/sbml/libsbml/DefaultTerm.class(in = 3243) (out= 1321)(deflated 59%) adding: org/sbml/libsbml/DefaultValues.class(in = 17808) (out= 4321)(deflated 75%) adding: org/sbml/libsbml/DefinitionURLRegistry.class(in = 1903) (out= 881)(deflated 53%) adding: org/sbml/libsbml/Delay.class(in = 3643) (out= 1489)(deflated 59%) adding: org/sbml/libsbml/Deletion.class(in = 3185) (out= 1310)(deflated 58%) adding: org/sbml/libsbml/Dimensions.class(in = 5204) (out= 1912)(deflated 63%) adding: org/sbml/libsbml/ElementFilter.class(in = 1714) (out= 861)(deflated 49%) adding: org/sbml/libsbml/Ellipse.class(in = 9265) (out= 2465)(deflated 73%) adding: org/sbml/libsbml/Event.class(in = 8738) (out= 2826)(deflated 67%) adding: org/sbml/libsbml/EventAssignment.class(in = 4830) (out= 1739)(deflated 63%) adding: org/sbml/libsbml/ExternalModelDefinition.class(in = 5124) (out= 1724)(deflated 66%) adding: org/sbml/libsbml/FbcAnd.class(in = 5098) (out= 1874)(deflated 63%) adding: org/sbml/libsbml/FbcAssociation.class(in = 4373) (out= 1550)(deflated 64%) adding: org/sbml/libsbml/FbcExtension.class(in = 7676) (out= 2977)(deflated 61%) adding: org/sbml/libsbml/FbcModelPlugin.class(in = 14805) (out= 3930)(deflated 73%) adding: org/sbml/libsbml/FbcOr.class(in = 5058) (out= 1878)(deflated 62%) adding: org/sbml/libsbml/FbcPkgNamespaces.class(in = 2382) (out= 1066)(deflated 55%) adding: org/sbml/libsbml/FbcReactionPlugin.class(in = 6122) (out= 1889)(deflated 69%) adding: org/sbml/libsbml/FbcSBMLDocumentPlugin.class(in = 1991) (out= 917)(deflated 53%) adding: org/sbml/libsbml/FbcSBasePlugin.class(in = 5076) (out= 1756)(deflated 65%) adding: org/sbml/libsbml/FbcSpeciesPlugin.class(in = 5116) (out= 1707)(deflated 66%) adding: org/sbml/libsbml/FbcToCobraConverter.class(in = 2141) (out= 970)(deflated 54%) adding: org/sbml/libsbml/FbcV1ToV2Converter.class(in = 2275) (out= 1008)(deflated 55%) adding: org/sbml/libsbml/FbcV2ToV1Converter.class(in = 2125) (out= 970)(deflated 54%) adding: org/sbml/libsbml/FluxBound.class(in = 5097) (out= 1822)(deflated 64%) adding: org/sbml/libsbml/FluxObjective.class(in = 5908) (out= 1997)(deflated 66%) adding: org/sbml/libsbml/FunctionDefinition.class(in = 4844) (out= 1673)(deflated 65%) adding: org/sbml/libsbml/FunctionTerm.class(in = 4227) (out= 1607)(deflated 61%) adding: org/sbml/libsbml/GeneAssociation.class(in = 4678) (out= 1674)(deflated 64%) adding: org/sbml/libsbml/GeneProduct.class(in = 4630) (out= 1683)(deflated 63%) adding: org/sbml/libsbml/GeneProductAssociation.class(in = 6558) (out= 2090)(deflated 68%) adding: org/sbml/libsbml/GeneProductRef.class(in = 4686) (out= 1662)(deflated 64%) adding: org/sbml/libsbml/GeneralGlyph.class(in = 8715) (out= 2743)(deflated 68%) adding: org/sbml/libsbml/GlobalRenderInformation.class(in = 6837) (out= 2132)(deflated 68%) adding: org/sbml/libsbml/GlobalStyle.class(in = 3021) (out= 1225)(deflated 59%) adding: org/sbml/libsbml/GradientBase.class(in = 6236) (out= 2119)(deflated 66%) adding: org/sbml/libsbml/GradientStop.class(in = 4468) (out= 1659)(deflated 62%) adding: org/sbml/libsbml/GraphicalObject.class(in = 6881) (out= 2231)(deflated 67%) adding: org/sbml/libsbml/GraphicalPrimitive1D.class(in = 6101) (out= 2005)(deflated 67%) adding: org/sbml/libsbml/GraphicalPrimitive2D.class(in = 4299) (out= 1529)(deflated 64%) adding: org/sbml/libsbml/Group.class(in = 6206) (out= 2231)(deflated 64%) adding: org/sbml/libsbml/GroupsExtension.class(in = 4885) (out= 1983)(deflated 59%) adding: org/sbml/libsbml/GroupsModelPlugin.class(in = 4847) (out= 1697)(deflated 64%) adding: org/sbml/libsbml/GroupsPkgNamespaces.class(in = 2436) (out= 1070)(deflated 56%) adding: org/sbml/libsbml/ISBMLExtensionNamespaces.class(in = 1574) (out= 733)(deflated 53%) adding: org/sbml/libsbml/IdList.class(in = 1894) (out= 883)(deflated 53%) adding: org/sbml/libsbml/IdentifierTransformer.class(in = 1827) (out= 871)(deflated 52%) adding: org/sbml/libsbml/Image.class(in = 7035) (out= 2378)(deflated 66%) adding: org/sbml/libsbml/InitialAssignment.class(in = 4890) (out= 1749)(deflated 64%) adding: org/sbml/libsbml/Input.class(in = 5279) (out= 1900)(deflated 64%) adding: org/sbml/libsbml/KeyValuePair.class(in = 4857) (out= 1745)(deflated 64%) adding: org/sbml/libsbml/KineticLaw.class(in = 9493) (out= 2940)(deflated 69%) adding: org/sbml/libsbml/L3ParserSettings.class(in = 5648) (out= 1851)(deflated 67%) adding: org/sbml/libsbml/L3v2extendedmathASTPlugin.class(in = 4308) (out= 1468)(deflated 65%) adding: org/sbml/libsbml/L3v2extendedmathExtension.class(in = 4128) (out= 1476)(deflated 64%) adding: org/sbml/libsbml/L3v2extendedmathPkgNamespaces.class(in = 2616) (out= 1081)(deflated 58%) adding: org/sbml/libsbml/L3v2extendedmathSBMLDocumentPlugin.class(in = 2212) (out= 926)(deflated 58%) adding: org/sbml/libsbml/Layout.class(in = 14453) (out= 4104)(deflated 71%) adding: org/sbml/libsbml/LayoutExtension.class(in = 7754) (out= 2970)(deflated 61%) adding: org/sbml/libsbml/LayoutModelPlugin.class(in = 3881) (out= 1411)(deflated 63%) adding: org/sbml/libsbml/LayoutPkgNamespaces.class(in = 2436) (out= 1070)(deflated 56%) adding: org/sbml/libsbml/LayoutSpeciesReferencePlugin.class(in = 1717) (out= 803)(deflated 53%) adding: org/sbml/libsbml/LineEnding.class(in = 6771) (out= 2282)(deflated 66%) adding: org/sbml/libsbml/LineSegment.class(in = 5593) (out= 1987)(deflated 64%) adding: org/sbml/libsbml/LinearGradient.class(in = 8338) (out= 2323)(deflated 72%) adding: org/sbml/libsbml/ListOf.class(in = 5205) (out= 1946)(deflated 62%) adding: org/sbml/libsbml/ListOfColorDefinitions.class(in = 4805) (out= 1654)(deflated 65%) adding: org/sbml/libsbml/ListOfCompartmentGlyphs.class(in = 3697) (out= 1403)(deflated 62%) adding: org/sbml/libsbml/ListOfCompartmentTypes.class(in = 3127) (out= 1216)(deflated 61%) adding: org/sbml/libsbml/ListOfCompartments.class(in = 3035) (out= 1213)(deflated 60%) adding: org/sbml/libsbml/ListOfConstraints.class(in = 2628) (out= 1132)(deflated 56%) adding: org/sbml/libsbml/ListOfCurveElements.class(in = 4943) (out= 1718)(deflated 65%) adding: org/sbml/libsbml/ListOfDeletions.class(in = 3156) (out= 1268)(deflated 59%) adding: org/sbml/libsbml/ListOfDrawables.class(in = 5471) (out= 1920)(deflated 64%) adding: org/sbml/libsbml/ListOfEventAssignments.class(in = 3382) (out= 1297)(deflated 61%) adding: org/sbml/libsbml/ListOfEvents.class(in = 2897) (out= 1203)(deflated 58%) adding: org/sbml/libsbml/ListOfExternalModelDefinitions.class(in = 3531) (out= 1286)(deflated 63%) adding: org/sbml/libsbml/ListOfFbcAssociations.class(in = 4594) (out= 1642)(deflated 64%) adding: org/sbml/libsbml/ListOfFluxBounds.class(in = 3332) (out= 1314)(deflated 60%) adding: org/sbml/libsbml/ListOfFluxObjectives.class(in = 4151) (out= 1494)(deflated 64%) adding: org/sbml/libsbml/ListOfFunctionDefinitions.class(in = 3196) (out= 1219)(deflated 61%) adding: org/sbml/libsbml/ListOfFunctionTerms.class(in = 4408) (out= 1569)(deflated 64%) adding: org/sbml/libsbml/ListOfGeneAssociations.class(in = 3488) (out= 1328)(deflated 61%) adding: org/sbml/libsbml/ListOfGeneProducts.class(in = 4069) (out= 1494)(deflated 63%) adding: org/sbml/libsbml/ListOfGlobalRenderInformation.class(in = 9171) (out= 2570)(deflated 71%) adding: org/sbml/libsbml/ListOfGlobalStyles.class(in = 4625) (out= 1646)(deflated 64%) adding: org/sbml/libsbml/ListOfGradientDefinitions.class(in = 5107) (out= 1711)(deflated 66%) adding: org/sbml/libsbml/ListOfGradientStops.class(in = 4690) (out= 1641)(deflated 65%) adding: org/sbml/libsbml/ListOfGraphicalObjects.class(in = 3829) (out= 1436)(deflated 62%) adding: org/sbml/libsbml/ListOfGroups.class(in = 3985) (out= 1506)(deflated 62%) adding: org/sbml/libsbml/ListOfInitialAssignments.class(in = 3430) (out= 1303)(deflated 62%) adding: org/sbml/libsbml/ListOfInputs.class(in = 3381) (out= 1342)(deflated 60%) adding: org/sbml/libsbml/ListOfKeyValuePairs.class(in = 5505) (out= 1824)(deflated 66%) adding: org/sbml/libsbml/ListOfLayouts.class(in = 3632) (out= 1434)(deflated 60%) adding: org/sbml/libsbml/ListOfLineEndings.class(in = 4756) (out= 1688)(deflated 64%) adding: org/sbml/libsbml/ListOfLineSegments.class(in = 3190) (out= 1316)(deflated 58%) adding: org/sbml/libsbml/ListOfLocalParameters.class(in = 3776) (out= 1353)(deflated 64%) adding: org/sbml/libsbml/ListOfLocalRenderInformation.class(in = 8540) (out= 2439)(deflated 71%) adding: org/sbml/libsbml/ListOfLocalStyles.class(in = 4580) (out= 1646)(deflated 64%) adding: org/sbml/libsbml/ListOfMembers.class(in = 5149) (out= 1826)(deflated 64%) adding: org/sbml/libsbml/ListOfModelDefinitions.class(in = 3331) (out= 1272)(deflated 61%) adding: org/sbml/libsbml/ListOfObjectives.class(in = 5227) (out= 1790)(deflated 65%) adding: org/sbml/libsbml/ListOfOutputs.class(in = 3408) (out= 1348)(deflated 60%) adding: org/sbml/libsbml/ListOfParameters.class(in = 2989) (out= 1202)(deflated 59%) adding: org/sbml/libsbml/ListOfPorts.class(in = 3300) (out= 1342)(deflated 59%) adding: org/sbml/libsbml/ListOfQualitativeSpecies.class(in = 3383) (out= 1268)(deflated 62%) adding: org/sbml/libsbml/ListOfReactionGlyphs.class(in = 3616) (out= 1393)(deflated 61%) adding: org/sbml/libsbml/ListOfReactions.class(in = 2916) (out= 1198)(deflated 58%) adding: org/sbml/libsbml/ListOfReferenceGlyphs.class(in = 3643) (out= 1401)(deflated 61%) adding: org/sbml/libsbml/ListOfReplacedElements.class(in = 2927) (out= 1193)(deflated 59%) adding: org/sbml/libsbml/ListOfRules.class(in = 2981) (out= 1239)(deflated 58%) adding: org/sbml/libsbml/ListOfSpecies.class(in = 2923) (out= 1208)(deflated 58%) adding: org/sbml/libsbml/ListOfSpeciesGlyphs.class(in = 3589) (out= 1388)(deflated 61%) adding: org/sbml/libsbml/ListOfSpeciesReferenceGlyphs.class(in = 3832) (out= 1411)(deflated 63%) adding: org/sbml/libsbml/ListOfSpeciesReferences.class(in = 3225) (out= 1253)(deflated 61%) adding: org/sbml/libsbml/ListOfSpeciesTypes.class(in = 3035) (out= 1211)(deflated 60%) adding: org/sbml/libsbml/ListOfSubmodels.class(in = 3156) (out= 1268)(deflated 59%) adding: org/sbml/libsbml/ListOfTextGlyphs.class(in = 3508) (out= 1390)(deflated 60%) adding: org/sbml/libsbml/ListOfTransitions.class(in = 3362) (out= 1300)(deflated 61%) adding: org/sbml/libsbml/ListOfUnitDefinitions.class(in = 3358) (out= 1292)(deflated 61%) adding: org/sbml/libsbml/ListOfUnits.class(in = 2514) (out= 1128)(deflated 55%) adding: org/sbml/libsbml/ListOfUserDefinedConstraintComponents.class(in = 5224) (out= 1602)(deflated 69%) adding: org/sbml/libsbml/ListOfUserDefinedConstraints.class(in = 5003) (out= 1615)(deflated 67%) adding: org/sbml/libsbml/LocalParameter.class(in = 3267) (out= 1273)(deflated 61%) adding: org/sbml/libsbml/LocalRenderInformation.class(in = 6918) (out= 2140)(deflated 69%) adding: org/sbml/libsbml/LocalStyle.class(in = 4166) (out= 1589)(deflated 61%) adding: org/sbml/libsbml/MathFilter.class(in = 1748) (out= 898)(deflated 48%) adding: org/sbml/libsbml/Member.class(in = 4569) (out= 1732)(deflated 62%) adding: org/sbml/libsbml/Model.class(in = 35621) (out= 9280)(deflated 73%) adding: org/sbml/libsbml/ModelCreator.class(in = 5090) (out= 1738)(deflated 65%) adding: org/sbml/libsbml/ModelCreatorList.class(in = 1929) (out= 936)(deflated 51%) adding: org/sbml/libsbml/ModelDefinition.class(in = 2704) (out= 1140)(deflated 57%) adding: org/sbml/libsbml/ModelHistory.class(in = 4242) (out= 1557)(deflated 63%) adding: org/sbml/libsbml/ModifierSpeciesReference.class(in = 2208) (out= 986)(deflated 55%) adding: org/sbml/libsbml/OFStream.class(in = 1741) (out= 833)(deflated 52%) adding: org/sbml/libsbml/OStream.class(in = 1454) (out= 804)(deflated 44%) adding: org/sbml/libsbml/OStringStream.class(in = 1283) (out= 683)(deflated 46%) adding: org/sbml/libsbml/Objective.class(in = 6471) (out= 2202)(deflated 65%) adding: org/sbml/libsbml/Output.class(in = 4961) (out= 1801)(deflated 63%) adding: org/sbml/libsbml/Parameter.class(in = 4872) (out= 1780)(deflated 63%) adding: org/sbml/libsbml/Point.class(in = 5462) (out= 2000)(deflated 63%) adding: org/sbml/libsbml/Polygon.class(in = 5269) (out= 1943)(deflated 63%) adding: org/sbml/libsbml/Port.class(in = 3690) (out= 1505)(deflated 59%) adding: org/sbml/libsbml/Priority.class(in = 3359) (out= 1381)(deflated 58%) adding: org/sbml/libsbml/QualExtension.class(in = 5383) (out= 2225)(deflated 58%) adding: org/sbml/libsbml/QualModelPlugin.class(in = 6578) (out= 2064)(deflated 68%) adding: org/sbml/libsbml/QualPkgNamespaces.class(in = 2400) (out= 1068)(deflated 55%) adding: org/sbml/libsbml/QualitativeSpecies.class(in = 5890) (out= 1927)(deflated 67%) adding: org/sbml/libsbml/RDFAnnotationParser.class(in = 5418) (out= 1612)(deflated 70%) adding: org/sbml/libsbml/RadialGradient.class(in = 8930) (out= 2457)(deflated 72%) adding: org/sbml/libsbml/RateRule.class(in = 1986) (out= 972)(deflated 51%) adding: org/sbml/libsbml/Reaction.class(in = 11751) (out= 3379)(deflated 71%) adding: org/sbml/libsbml/ReactionGlyph.class(in = 7746) (out= 2487)(deflated 67%) adding: org/sbml/libsbml/Rectangle.class(in = 9616) (out= 2717)(deflated 71%) adding: org/sbml/libsbml/ReferenceGlyph.class(in = 6359) (out= 2165)(deflated 65%) adding: org/sbml/libsbml/RelAbsVector.class(in = 3783) (out= 1360)(deflated 64%) adding: org/sbml/libsbml/RenderCubicBezier.class(in = 9615) (out= 2455)(deflated 74%) adding: org/sbml/libsbml/RenderCurve.class(in = 6756) (out= 2313)(deflated 65%) adding: org/sbml/libsbml/RenderExtension.class(in = 8023) (out= 3118)(deflated 61%) adding: org/sbml/libsbml/RenderGraphicalObjectPlugin.class(in = 3414) (out= 1209)(deflated 64%) adding: org/sbml/libsbml/RenderGroup.class(in = 12680) (out= 3723)(deflated 70%) adding: org/sbml/libsbml/RenderInformationBase.class(in = 12818) (out= 3443)(deflated 73%) adding: org/sbml/libsbml/RenderLayoutPlugin.class(in = 5029) (out= 1649)(deflated 67%) adding: org/sbml/libsbml/RenderListOfLayoutsPlugin.class(in = 4944) (out= 1579)(deflated 68%) adding: org/sbml/libsbml/RenderPkgNamespaces.class(in = 2436) (out= 1070)(deflated 56%) adding: org/sbml/libsbml/RenderPoint.class(in = 6931) (out= 2152)(deflated 68%) adding: org/sbml/libsbml/ReplacedBy.class(in = 2708) (out= 1176)(deflated 56%) adding: org/sbml/libsbml/ReplacedElement.class(in = 4161) (out= 1523)(deflated 63%) adding: org/sbml/libsbml/Replacing.class(in = 2454) (out= 1044)(deflated 57%) adding: org/sbml/libsbml/Rule.class(in = 5597) (out= 2091)(deflated 62%) adding: org/sbml/libsbml/SBMLConstructorException.class(in = 1861) (out= 850)(deflated 54%) adding: org/sbml/libsbml/SBMLConverter.class(in = 4775) (out= 1693)(deflated 64%) adding: org/sbml/libsbml/SBMLConverterRegistry.class(in = 2188) (out= 903)(deflated 58%) adding: org/sbml/libsbml/SBMLDocument.class(in = 13472) (out= 3974)(deflated 70%) adding: org/sbml/libsbml/SBMLDocumentPlugin.class(in = 2430) (out= 1040)(deflated 57%) adding: org/sbml/libsbml/SBMLError.class(in = 2391) (out= 1020)(deflated 57%) adding: org/sbml/libsbml/SBMLErrorLog.class(in = 6494) (out= 2001)(deflated 69%) adding: org/sbml/libsbml/SBMLExtension.class(in = 5593) (out= 1847)(deflated 66%) adding: org/sbml/libsbml/SBMLExtensionException.class(in = 982) (out= 586)(deflated 40%) adding: org/sbml/libsbml/SBMLExtensionRegistry.class(in = 4984) (out= 1706)(deflated 65%) adding: org/sbml/libsbml/SBMLExternalValidator.class(in = 2951) (out= 1129)(deflated 61%) adding: org/sbml/libsbml/SBMLFileResolver.class(in = 2724) (out= 1082)(deflated 60%) adding: org/sbml/libsbml/SBMLFunctionDefinitionConverter.class(in = 2333) (out= 977)(deflated 58%) adding: org/sbml/libsbml/SBMLIdConverter.class(in = 2077) (out= 964)(deflated 53%) adding: org/sbml/libsbml/SBMLInferUnitsConverter.class(in = 2205) (out= 972)(deflated 55%) adding: org/sbml/libsbml/SBMLInitialAssignmentConverter.class(in = 2317) (out= 983)(deflated 57%) adding: org/sbml/libsbml/SBMLLevel1Version1Converter.class(in = 2269) (out= 982)(deflated 56%) adding: org/sbml/libsbml/SBMLLevelVersionConverter.class(in = 2776) (out= 1105)(deflated 60%) adding: org/sbml/libsbml/SBMLLocalParameterConverter.class(in = 2269) (out= 978)(deflated 56%) adding: org/sbml/libsbml/SBMLNamespaces.class(in = 6198) (out= 2110)(deflated 65%) adding: org/sbml/libsbml/SBMLNamespacesList.class(in = 1965) (out= 941)(deflated 52%) adding: org/sbml/libsbml/SBMLReactionConverter.class(in = 2483) (out= 1042)(deflated 58%) adding: org/sbml/libsbml/SBMLReader.class(in = 1933) (out= 972)(deflated 49%) adding: org/sbml/libsbml/SBMLResolver.class(in = 3171) (out= 1249)(deflated 60%) adding: org/sbml/libsbml/SBMLResolverRegistry.class(in = 3359) (out= 1212)(deflated 63%) adding: org/sbml/libsbml/SBMLRuleConverter.class(in = 2109) (out= 967)(deflated 54%) adding: org/sbml/libsbml/SBMLStripPackageConverter.class(in = 2657) (out= 1078)(deflated 59%) adding: org/sbml/libsbml/SBMLTransforms.class(in = 3878) (out= 1295)(deflated 66%) adding: org/sbml/libsbml/SBMLUnitsConverter.class(in = 2125) (out= 966)(deflated 54%) adding: org/sbml/libsbml/SBMLUri.class(in = 1944) (out= 924)(deflated 52%) adding: org/sbml/libsbml/SBMLValidator.class(in = 4409) (out= 1667)(deflated 62%) adding: org/sbml/libsbml/SBMLWriter.class(in = 2906) (out= 1205)(deflated 58%) adding: org/sbml/libsbml/SBO.class(in = 4172) (out= 1586)(deflated 61%) adding: org/sbml/libsbml/SBase.class(in = 21554) (out= 6238)(deflated 71%) adding: org/sbml/libsbml/SBaseExtensionPoint.class(in = 2360) (out= 977)(deflated 58%) adding: org/sbml/libsbml/SBaseList.class(in = 1803) (out= 926)(deflated 48%) adding: org/sbml/libsbml/SBasePlugin.class(in = 7052) (out= 2354)(deflated 66%) adding: org/sbml/libsbml/SBaseRef.class(in = 6452) (out= 2188)(deflated 66%) adding: org/sbml/libsbml/SWIGTYPE_p_ExpectedAttributes.class(in = 577) (out= 343)(deflated 40%) adding: org/sbml/libsbml/SWIGTYPE_p_FormulaUnitsData.class(in = 571) (out= 339)(deflated 40%) adding: org/sbml/libsbml/SWIGTYPE_p_List.class(in = 535) (out= 329)(deflated 38%) adding: org/sbml/libsbml/SWIGTYPE_p_PrefixTransformer.class(in = 574) (out= 341)(deflated 40%) adding: org/sbml/libsbml/SWIGTYPE_p_StringBuffer_t.class(in = 565) (out= 339)(deflated 40%) adding: org/sbml/libsbml/SWIGTYPE_p_UnitFormulaFormatter.class(in = 583) (out= 340)(deflated 41%) adding: org/sbml/libsbml/SWIGTYPE_p_double.class(in = 541) (out= 331)(deflated 38%) adding: org/sbml/libsbml/SWIGTYPE_p_f_p_Model_p_SBMLErrorLog_p_void__int.class(in = 631) (out= 355)(deflated 43%) adding: org/sbml/libsbml/SWIGTYPE_p_int.class(in = 532) (out= 329)(deflated 38%) adding: org/sbml/libsbml/SWIGTYPE_p_p_void.class(in = 541) (out= 330)(deflated 39%) adding: org/sbml/libsbml/SWIGTYPE_p_packageErrorTableEntry.class(in = 589) (out= 344)(deflated 41%) adding: org/sbml/libsbml/SWIGTYPE_p_packageErrorTableEntryV3.class(in = 595) (out= 346)(deflated 41%) adding: org/sbml/libsbml/SWIGTYPE_p_std__ostream.class(in = 559) (out= 336)(deflated 39%) adding: org/sbml/libsbml/SWIGTYPE_p_std__stringstream.class(in = 574) (out= 338)(deflated 41%) adding: org/sbml/libsbml/SWIGTYPE_p_std__vectorT_ASTBasePlugin_p_t.class(in = 613) (out= 351)(deflated 42%) adding: org/sbml/libsbml/SWIGTYPE_p_std__vectorT_ASTNode_p_t.class(in = 595) (out= 347)(deflated 41%) adding: org/sbml/libsbml/SWIGTYPE_p_std__vectorT_XMLError_p_t.class(in = 598) (out= 348)(deflated 41%) adding: org/sbml/libsbml/SWIGTYPE_p_std__vectorT_std__string_t.class(in = 601) (out= 346)(deflated 42%) adding: org/sbml/libsbml/SWIGTYPE_p_std__vectorT_unsigned_int_t.class(in = 604) (out= 349)(deflated 42%) adding: org/sbml/libsbml/SWIGTYPE_p_void.class(in = 535) (out= 330)(deflated 38%) adding: org/sbml/libsbml/SimpleSpeciesReference.class(in = 2764) (out= 1035)(deflated 62%) adding: org/sbml/libsbml/Species.class(in = 8738) (out= 2690)(deflated 69%) adding: org/sbml/libsbml/SpeciesGlyph.class(in = 4330) (out= 1563)(deflated 63%) adding: org/sbml/libsbml/SpeciesReference.class(in = 5418) (out= 1813)(deflated 66%) adding: org/sbml/libsbml/SpeciesReferenceGlyph.class(in = 7021) (out= 2270)(deflated 67%) adding: org/sbml/libsbml/SpeciesType.class(in = 2908) (out= 1203)(deflated 58%) adding: org/sbml/libsbml/StoichiometryMath.class(in = 4003) (out= 1514)(deflated 62%) adding: org/sbml/libsbml/StringSet.class(in = 1985) (out= 871)(deflated 56%) adding: org/sbml/libsbml/Style.class(in = 5742) (out= 2063)(deflated 64%) adding: org/sbml/libsbml/Submodel.class(in = 9867) (out= 3129)(deflated 68%) adding: org/sbml/libsbml/SyntaxChecker.class(in = 2141) (out= 956)(deflated 55%) adding: org/sbml/libsbml/Text.class(in = 10193) (out= 3095)(deflated 69%) adding: org/sbml/libsbml/TextGlyph.class(in = 4948) (out= 1736)(deflated 64%) adding: org/sbml/libsbml/Transformation.class(in = 4892) (out= 1754)(deflated 64%) adding: org/sbml/libsbml/Transformation2D.class(in = 3801) (out= 1481)(deflated 61%) adding: org/sbml/libsbml/Transition.class(in = 10792) (out= 3261)(deflated 69%) adding: org/sbml/libsbml/Trigger.class(in = 4295) (out= 1646)(deflated 61%) adding: org/sbml/libsbml/Unit.class(in = 8598) (out= 2913)(deflated 66%) adding: org/sbml/libsbml/UnitDefinition.class(in = 8690) (out= 2648)(deflated 69%) adding: org/sbml/libsbml/UserDefinedConstraint.class(in = 8302) (out= 2423)(deflated 70%) adding: org/sbml/libsbml/UserDefinedConstraintComponent.class(in = 6717) (out= 1996)(deflated 70%) adding: org/sbml/libsbml/XMLAttributes.class(in = 6018) (out= 1788)(deflated 70%) adding: org/sbml/libsbml/XMLConstructorException.class(in = 1151) (out= 658)(deflated 42%) adding: org/sbml/libsbml/XMLError.class(in = 5176) (out= 1879)(deflated 63%) adding: org/sbml/libsbml/XMLErrorLog.class(in = 4259) (out= 1597)(deflated 62%) adding: org/sbml/libsbml/XMLInputStream.class(in = 4725) (out= 1632)(deflated 65%) adding: org/sbml/libsbml/XMLNamespaces.class(in = 4126) (out= 1479)(deflated 64%) adding: org/sbml/libsbml/XMLNode.class(in = 8262) (out= 2512)(deflated 69%) adding: org/sbml/libsbml/XMLOutputStream.class(in = 9117) (out= 2542)(deflated 72%) adding: org/sbml/libsbml/XMLOwningOutputFileStream.class(in = 1990) (out= 805)(deflated 59%) adding: org/sbml/libsbml/XMLOwningOutputStringStream.class(in = 1701) (out= 752)(deflated 55%) adding: org/sbml/libsbml/XMLToken.class(in = 12792) (out= 3409)(deflated 73%) adding: org/sbml/libsbml/XMLTriple.class(in = 2455) (out= 1099)(deflated 55%) adding: org/sbml/libsbml/double_array.class(in = 1681) (out= 838)(deflated 50%) adding: org/sbml/libsbml/int_array.class(in = 1630) (out= 834)(deflated 48%) adding: org/sbml/libsbml/libsbml.class(in = 18345) (out= 6590)(deflated 64%) adding: org/sbml/libsbml/libsbmlConstants.class(in = 71378) (out= 23249)(deflated 67%) adding: org/sbml/libsbml/libsbmlJNI.class(in = 414111) (out= 78949)(deflated 80%) /usr/bin/javac -cp /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/java/libsbmlj.jar:/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/java -d /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/java/test test/org/sbml/libsbml/test/annotation/TestCVTerms.java;test/org/sbml/libsbml/test/annotation/TestCVTerms_newSetters.java;test/org/sbml/libsbml/test/annotation/TestCopyAndClone.java;test/org/sbml/libsbml/test/annotation/TestDate_newSetters.java;test/org/sbml/libsbml/test/annotation/TestL3ModelHistory.java;test/org/sbml/libsbml/test/annotation/TestModelCreator_newSetters.java;test/org/sbml/libsbml/test/annotation/TestModelHistory.java;test/org/sbml/libsbml/test/annotation/TestModelHistory_newSetters.java;test/org/sbml/libsbml/test/annotation/TestRDFAnnotation.java;test/org/sbml/libsbml/test/annotation/TestRDFAnnotation2.java;test/org/sbml/libsbml/test/annotation/TestRDFAnnotationC.java;test/org/sbml/libsbml/test/annotation/TestValidation.java;test/org/sbml/libsbml/test/math/TestASTNode.java;test/org/sbml/libsbml/test/math/TestReadFromFile1.java;test/org/sbml/libsbml/test/math/TestReadFromFile2.java;test/org/sbml/libsbml/test/math/TestReadMathML.java;test/org/sbml/libsbml/test/math/TestValidASTNode.java;test/org/sbml/libsbml/test/math/TestWriteMathML.java;test/org/sbml/libsbml/test/sbml/TestAlgebraicRule.java;test/org/sbml/libsbml/test/sbml/TestAncestor.java;test/org/sbml/libsbml/test/sbml/TestAssignmentRule.java;test/org/sbml/libsbml/test/sbml/TestCompartment.java;test/org/sbml/libsbml/test/sbml/TestCompartmentType.java;test/org/sbml/libsbml/test/sbml/TestCompartmentType_newSetters.java;test/org/sbml/libsbml/test/sbml/TestCompartmentVolumeRule.java;test/org/sbml/libsbml/test/sbml/TestCompartment_newSetters.java;test/org/sbml/libsbml/test/sbml/TestConsistencyChecks.java;test/org/sbml/libsbml/test/sbml/TestConstraint.java;test/org/sbml/libsbml/test/sbml/TestConstraint_newSetters.java;test/org/sbml/libsbml/test/sbml/TestCopyAndClone.java;test/org/sbml/libsbml/test/sbml/TestDelay.java;test/org/sbml/libsbml/test/sbml/TestEvent.java;test/org/sbml/libsbml/test/sbml/TestEventAssignment.java;test/org/sbml/libsbml/test/sbml/TestEventAssignment_newSetters.java;test/org/sbml/libsbml/test/sbml/TestEvent_newSetters.java;test/org/sbml/libsbml/test/sbml/TestFunctionDefinition.java;test/org/sbml/libsbml/test/sbml/TestFunctionDefinition_newSetters.java;test/org/sbml/libsbml/test/sbml/TestGetMultipleObjects.java;test/org/sbml/libsbml/test/sbml/TestInitialAssignment.java;test/org/sbml/libsbml/test/sbml/TestInitialAssignment_newSetters.java;test/org/sbml/libsbml/test/sbml/TestInternalConsistencyChecks.java;test/org/sbml/libsbml/test/sbml/TestKineticLaw.java;test/org/sbml/libsbml/test/sbml/TestKineticLaw_newSetters.java;test/org/sbml/libsbml/test/sbml/TestL3Compartment.java;test/org/sbml/libsbml/test/sbml/TestL3Event.java;test/org/sbml/libsbml/test/sbml/TestL3KineticLaw.java;test/org/sbml/libsbml/test/sbml/TestL3LocalParameter.java;test/org/sbml/libsbml/test/sbml/TestL3Model.java;test/org/sbml/libsbml/test/sbml/TestL3Parameter.java;test/org/sbml/libsbml/test/sbml/TestL3Reaction.java;test/org/sbml/libsbml/test/sbml/TestL3Species.java;test/org/sbml/libsbml/test/sbml/TestL3SpeciesReference.java;test/org/sbml/libsbml/test/sbml/TestL3Trigger.java;test/org/sbml/libsbml/test/sbml/TestL3Unit.java;test/org/sbml/libsbml/test/sbml/TestListOf.java;test/org/sbml/libsbml/test/sbml/TestModel.java;test/org/sbml/libsbml/test/sbml/TestModel_newSetters.java;test/org/sbml/libsbml/test/sbml/TestModifierSpeciesReference.java;test/org/sbml/libsbml/test/sbml/TestParameter.java;test/org/sbml/libsbml/test/sbml/TestParameterRule.java;test/org/sbml/libsbml/test/sbml/TestParameter_newSetters.java;test/org/sbml/libsbml/test/sbml/TestPriority.java;test/org/sbml/libsbml/test/sbml/TestRateRule.java;test/org/sbml/libsbml/test/sbml/TestReaction.java;test/org/sbml/libsbml/test/sbml/TestReaction_newSetters.java;test/org/sbml/libsbml/test/sbml/TestReadFromFile1.java;test/org/sbml/libsbml/test/sbml/TestReadFromFile2.java;test/org/sbml/libsbml/test/sbml/TestReadFromFile3.java;test/org/sbml/libsbml/test/sbml/TestReadFromFile4.java;test/org/sbml/libsbml/test/sbml/TestReadFromFile5.java;test/org/sbml/libsbml/test/sbml/TestReadFromFile6.java;test/org/sbml/libsbml/test/sbml/TestReadFromFile7.java;test/org/sbml/libsbml/test/sbml/TestReadFromFile8.java;test/org/sbml/libsbml/test/sbml/TestReadFromFile9.java;test/org/sbml/libsbml/test/sbml/TestReadSBML.java;test/org/sbml/libsbml/test/sbml/TestRequiredAttributes.java;test/org/sbml/libsbml/test/sbml/TestRequiredElements.java;test/org/sbml/libsbml/test/sbml/TestRule.java;test/org/sbml/libsbml/test/sbml/TestRule_newSetters.java;test/org/sbml/libsbml/test/sbml/TestSBMLConstructorException.java;test/org/sbml/libsbml/test/sbml/TestSBMLConvert.java;test/org/sbml/libsbml/test/sbml/TestSBMLConvertStrict.java;test/org/sbml/libsbml/test/sbml/TestSBMLDocument.java;test/org/sbml/libsbml/test/sbml/TestSBMLError.java;test/org/sbml/libsbml/test/sbml/TestSBMLNamespaces.java;test/org/sbml/libsbml/test/sbml/TestSBMLParentObject.java;test/org/sbml/libsbml/test/sbml/TestSBMLTransforms.java;test/org/sbml/libsbml/test/sbml/TestSBase.java;test/org/sbml/libsbml/test/sbml/TestSBase_newSetters.java;test/org/sbml/libsbml/test/sbml/TestSpecies.java;test/org/sbml/libsbml/test/sbml/TestSpeciesConcentrationRule.java;test/org/sbml/libsbml/test/sbml/TestSpeciesReference.java;test/org/sbml/libsbml/test/sbml/TestSpeciesReference_newSetters.java;test/org/sbml/libsbml/test/sbml/TestSpeciesType.java;test/org/sbml/libsbml/test/sbml/TestSpeciesType_newSetters.java;test/org/sbml/libsbml/test/sbml/TestSpecies_newSetters.java;test/org/sbml/libsbml/test/sbml/TestStoichiometryMath.java;test/org/sbml/libsbml/test/sbml/TestSyntaxChecker.java;test/org/sbml/libsbml/test/sbml/TestTrigger.java;test/org/sbml/libsbml/test/sbml/TestUnit.java;test/org/sbml/libsbml/test/sbml/TestUnitDefinition.java;test/org/sbml/libsbml/test/sbml/TestUnitDefinition_newSetters.java;test/org/sbml/libsbml/test/sbml/TestUnitKind.java;test/org/sbml/libsbml/test/sbml/TestUnit_newSetters.java;test/org/sbml/libsbml/test/sbml/TestWriteL3SBML.java;test/org/sbml/libsbml/test/sbml/TestWriteSBML.java;test/org/sbml/libsbml/test/xml/TestCopyAndClone.java;test/org/sbml/libsbml/test/xml/TestXMLAttributes.java;test/org/sbml/libsbml/test/xml/TestXMLAttributesC.java;test/org/sbml/libsbml/test/xml/TestXMLError.java;test/org/sbml/libsbml/test/xml/TestXMLErrorC.java;test/org/sbml/libsbml/test/xml/TestXMLNamespaces.java;test/org/sbml/libsbml/test/xml/TestXMLNode.java;test/org/sbml/libsbml/test/xml/TestXMLNode_newSetters.java;test/org/sbml/libsbml/test/xml/TestXMLOutputStream.java;test/org/sbml/libsbml/test/xml/TestXMLToken.java;test/org/sbml/libsbml/test/xml/TestXMLToken_newSetters.java;test/org/sbml/libsbml/test/xml/TestXMLTriple.java;/build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/AutoTestRunner.java;/build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/TestPrintVersion.java Note: /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/java/AutoTestRunner.java uses or overrides a deprecated API. Note: Recompile with -Xlint:deprecation for details. make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 99%] Built target binding_java_jar make -f src/bindings/perl/CMakeFiles/binding_perl_swig.dir/build.make src/bindings/perl/CMakeFiles/binding_perl_swig.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/perl /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/perl/CMakeFiles/binding_perl_swig.dir/DependInfo.cmake "--color=" binding_perl_swig make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/bindings/perl/CMakeFiles/binding_perl_swig.dir/build.make src/bindings/perl/CMakeFiles/binding_perl_swig.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 99%] Swig Perl bindings source cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/perl && /usr/bin/python3.13 /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py --language perl --top /build/reproducible-path/libsbml-5.20.5+dfsg --master /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/libsbml.i --output /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/perl/LibSBML.pod --define USE_COMP --define USE_FBC --define USE_GROUPS --define USE_L3V2EXTENDEDMATH --define USE_LAYOUT --define USE_QUAL --define USE_RENDER --define USE_COMP --define USE_FBC --define USE_GROUPS --define USE_L3V2EXTENDEDMATH --define USE_QUAL --define USE_RENDER /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:447: SyntaxWarning: invalid escape sequence '\s' p = re.compile('(\s+?)\*/', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:502: SyntaxWarning: invalid escape sequence '\*' docstring = re.sub('/\*\*(\s+\*)+', r'/** \n *', docstring) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:506: SyntaxWarning: invalid escape sequence '\*' docstring = re.sub('\*/', r'* @internal\n */', docstring) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:851: SyntaxWarning: invalid escape sequence '\W' p = re.compile('(\W+)(\w+?)::(\w+\s*\([^)]*?\))') /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:994: SyntaxWarning: invalid escape sequence '\s' p = re.compile('@link\s*\*?\s+(\w+)?#(\w+)\s*\*?\s+(\w+)\s*@endlink') /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1010: SyntaxWarning: invalid escape sequence '\s' p = re.compile('^\s*\*\s+@par(\s)', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1015: SyntaxWarning: invalid escape sequence '\s' p = re.compile('(@if|@ifnot)[\s*]+(\w+)[\s*]+(.+?)((@else)\s+(.+?))?@endif', re.DOTALL) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1024: SyntaxWarning: invalid escape sequence '\s' p = re.compile('^(\s+)\*\s*$', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1026: SyntaxWarning: invalid escape sequence '\s' p = re.compile('^((?!\s+\Z)\s+)$', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1028: SyntaxWarning: invalid escape sequence '\Z' p = re.compile('^(?!\Z)$', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1041: SyntaxWarning: invalid escape sequence '\s' p = re.compile('@section\s+[^\s]+\s+(.*)$', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1043: SyntaxWarning: invalid escape sequence '\s' p = re.compile('@subsection\s+[^\s]+\s+(.*)$', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1045: SyntaxWarning: invalid escape sequence '\s' p = re.compile('@subsubsection\s+[^\s]+\s+(.*)$', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1051: SyntaxWarning: invalid escape sequence '\s' p = re.compile('@image\s+html+\s+([^\s]+).*$', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1053: SyntaxWarning: invalid escape sequence '\s' p = re.compile('@image\s+latex+\s+([^\s]+).*$', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1075: SyntaxWarning: invalid escape sequence '\*' docstring = re.sub('@c(\n[ \t]*\*[ \t]*)([^ ,;()/*\n\t<]+)', r'\1\2', docstring) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1077: SyntaxWarning: invalid escape sequence '\*' docstring = re.sub('@p(\n[ \t]*\*[ \t]+)([^ ,.:;()/*\n\t<]+)', r'\1\2', docstring) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1079: SyntaxWarning: invalid escape sequence '\*' docstring = re.sub('@em(\n[ \t]*\*[ \t]*)([^ ,.:;()/*\n\t<]+)', r'\1\2', docstring) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1085: SyntaxWarning: invalid escape sequence '\s' p = re.compile('^(\s+\*\s+)(@li\s+.*?)(\s+)(\*/|

\s+\*\s+(?!@li\s))', re.MULTILINE|re.DOTALL) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1090: SyntaxWarning: invalid escape sequence '\s' p = re.compile('^(\s+\*\s+)(@deprecated\s)((\S|\s)+?)(

|\*/)', re.MULTILINE|re.DOTALL) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1111: SyntaxWarning: invalid escape sequence '\s' p = re.compile('^(\s+)\*\s+\*\s+@', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1114: SyntaxWarning: invalid escape sequence '\s' p = re.compile('^(\s*)\*\s*

', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1116: SyntaxWarning: invalid escape sequence '\s' p = re.compile('^(\s*)\*?\s*

((\s+\*)+\s+

)+', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1119: SyntaxWarning: invalid escape sequence '\s' p = re.compile('

([\s*]*

)+', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1142: SyntaxWarning: invalid escape sequence '\s' p = re.compile('@ref\s+\*?\s*(\w+)', re.DOTALL) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1227: SyntaxWarning: invalid escape sequence '\s' docstring = re.sub('(@see\s+\w+)::', r'\1#', docstring) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1235: SyntaxWarning: invalid escape sequence '\s' docstring = re.sub('(@see\s+)([\w:.]+)\(', r'\1#\2(', docstring) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1254: SyntaxWarning: invalid escape sequence '\s' p = re.compile('@link([\s/*]+[\w\s,.:#()*]+[\s/*]*[\w():#]+[\s/*]*)@endlink', re.DOTALL) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1284: SyntaxWarning: invalid escape sequence '\s' p = re.compile('@par(\s)', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1430: SyntaxWarning: invalid escape sequence '\s' p = re.compile('(\s+)(\S+?)::(\w+\s*)(\([^)]*?\))', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1432: SyntaxWarning: invalid escape sequence '\s' p = re.compile('(@see\s+)(\w+\s*)(\([^)]*?\))') /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1452: SyntaxWarning: invalid escape sequence '\s' p = re.compile('^\s+(\S*\s*)', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1456: SyntaxWarning: invalid escape sequence '\S' p = re.compile('^[ \t]+(\S)', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1472: SyntaxWarning: invalid escape sequence '\*' docstring = re.sub('@c(\n[ \t]*\*[ \t]*)([^ ,.:;()/*\n\t<]+)', r'\1C<\2>', docstring) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1474: SyntaxWarning: invalid escape sequence '\*' docstring = re.sub('@p(\n[ \t]*\*[ \t]+)([^ ,.:;()/*\n\t<]+)', r'\1C<\2>', docstring) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1476: SyntaxWarning: invalid escape sequence '\*' docstring = re.sub('@em(\n[ \t]*\*[ \t]*)([^ ,.:;()/*\n\t<]+)', r'\1I<\2>', docstring) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1743: SyntaxWarning: invalid escape sequence '\s' p = re.compile('@copy(details|doc)\s+(\w+)') /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1755: SyntaxWarning: invalid escape sequence '\s' p = re.compile('@htmlinclude\s+(\*\s+)*([-\w."\']+)', re.DOTALL) #' /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1760: SyntaxWarning: invalid escape sequence '\*' p = re.compile('^([ \t]*\*)[ \t]+\*[ \t]*$', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1762: SyntaxWarning: invalid escape sequence '\*' p = re.compile('^([ \t]*\*[ \t]*)\n[ \t]*\*[ \t]*\n[ \t]*\*[ \t]*@li', re.MULTILINE) /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/swigdoc.py:1167: DeprecationWarning: 'count' is passed as positional argument return re.sub(r'', '', docstring, re.DOTALL|re.MULTILINE) cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/perl && /usr/bin/swig -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/ -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/include -c++ -perl5 -proxy -DLIBSBML_COMPILED_IN_SRC -DUSE_LIBXML -DUSE_BZ2 -DUSE_ZLIB -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_QUAL -DUSE_RENDER -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_QUAL -DUSE_RENDER -o /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/perl/LibSBML_wrap.cpp /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/LibSBML.i /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLInputStream.h:241: Warning 314: 'next' is a perl keyword /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:850: Warning 509: Overloaded method SBase::getAncestorOfType(int,std::string const &) effectively ignored, /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:898: Warning 509: as it is shadowed by SBase::getAncestorOfType(int,std::string const) const. /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:344: Warning 509: Overloaded method GraphicalPrimitive2D::setFillRule(FillRule_t const) effectively ignored, /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:328: Warning 509: as it is shadowed by GraphicalPrimitive2D::setFillRule(GraphicalPrimitive2D::FILL_RULE). /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GradientBase.h:389: Warning 509: Overloaded method GradientBase::setSpreadMethod(GradientSpreadMethod_t const) effectively ignored, /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/GradientBase.h:373: Warning 509: as it is shadowed by GradientBase::setSpreadMethod(GradientBase::SPREADMETHOD). /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Text.h:448: Warning 509: Overloaded method Text::setFontWeight(Text::FONT_WEIGHT) effectively ignored, /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Text.h:444: Warning 509: as it is shadowed by Text::setFontWeight(FontWeight_t const). /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Text.h:486: Warning 509: Overloaded method Text::setFontStyle(Text::FONT_STYLE) effectively ignored, /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Text.h:481: Warning 509: as it is shadowed by Text::setFontStyle(FontStyle_t const). /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Text.h:522: Warning 509: Overloaded method Text::setTextAnchor(Text::TEXT_ANCHOR) effectively ignored, /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Text.h:517: Warning 509: as it is shadowed by Text::setTextAnchor(HTextAnchor_t const). /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Text.h:559: Warning 509: Overloaded method Text::setVTextAnchor(Text::TEXT_ANCHOR) effectively ignored, /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/Text.h:554: Warning 509: as it is shadowed by Text::setVTextAnchor(VTextAnchor_t const). /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.h:537: Warning 509: Overloaded method RenderGroup::setFontWeight(Text::FONT_WEIGHT) effectively ignored, /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.h:533: Warning 509: as it is shadowed by RenderGroup::setFontWeight(FontWeight_t const). /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.h:575: Warning 509: Overloaded method RenderGroup::setFontStyle(Text::FONT_STYLE) effectively ignored, /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.h:570: Warning 509: as it is shadowed by RenderGroup::setFontStyle(FontStyle_t const). /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.h:612: Warning 509: Overloaded method RenderGroup::setTextAnchor(Text::TEXT_ANCHOR) effectively ignored, /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.h:607: Warning 509: as it is shadowed by RenderGroup::setTextAnchor(HTextAnchor_t const). /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.h:684: Warning 509: Overloaded method RenderGroup::setVTextAnchor(VTextAnchor_t const) effectively ignored, /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.h:644: Warning 509: as it is shadowed by RenderGroup::setVTextAnchor(Text::TEXT_ANCHOR). /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.h:687: Warning 509: Overloaded method RenderGroup::setVtextAnchor(VTextAnchor_t const) effectively ignored, /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/RenderGroup.h:648: Warning 509: as it is shadowed by RenderGroup::setVtextAnchor(Text::TEXT_ANCHOR). /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/DefaultValues.h:915: Warning 509: Overloaded method DefaultValues::setSpreadMethod(GradientSpreadMethod_t const) effectively ignored, /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/DefaultValues.h:900: Warning 509: as it is shadowed by DefaultValues::setSpreadMethod(GradientBase::SPREADMETHOD const). /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/DefaultValues.h:1146: Warning 509: Overloaded method DefaultValues::setFillRule(FillRule_t) effectively ignored, /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/DefaultValues.h:1130: Warning 509: as it is shadowed by DefaultValues::setFillRule(GraphicalPrimitive2D::FILL_RULE const). /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/DefaultValues.h:1266: Warning 509: Overloaded method DefaultValues::setFontWeight(FontWeight_t) effectively ignored, /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/DefaultValues.h:1250: Warning 509: as it is shadowed by DefaultValues::setFontWeight(Text::FONT_WEIGHT const). /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/DefaultValues.h:1314: Warning 509: Overloaded method DefaultValues::setFontStyle(FontStyle_t) effectively ignored, /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/DefaultValues.h:1298: Warning 509: as it is shadowed by DefaultValues::setFontStyle(Text::FONT_STYLE const). /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/DefaultValues.h:1362: Warning 509: Overloaded method DefaultValues::setTextAnchor(HTextAnchor_t) effectively ignored, /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/DefaultValues.h:1346: Warning 509: as it is shadowed by DefaultValues::setTextAnchor(Text::TEXT_ANCHOR const). /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/DefaultValues.h:1410: Warning 509: Overloaded method DefaultValues::setVTextAnchor(VTextAnchor_t) effectively ignored, /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml/DefaultValues.h:1394: Warning 509: as it is shadowed by DefaultValues::setVTextAnchor(Text::TEXT_ANCHOR const). make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [ 99%] Built target binding_perl_swig make -f src/bindings/perl/CMakeFiles/binding_perl_lib.dir/build.make src/bindings/perl/CMakeFiles/binding_perl_lib.dir/depend make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' cd /build/reproducible-path/libsbml-5.20.5+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libsbml-5.20.5+dfsg /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl /build/reproducible-path/libsbml-5.20.5+dfsg/build /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/perl /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/perl/CMakeFiles/binding_perl_lib.dir/DependInfo.cmake "--color=" binding_perl_lib make[3]: Leaving directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' make -f src/bindings/perl/CMakeFiles/binding_perl_lib.dir/build.make src/bindings/perl/CMakeFiles/binding_perl_lib.dir/build make[3]: Entering directory '/build/reproducible-path/libsbml-5.20.5+dfsg/build' [100%] Building CXX object src/bindings/perl/CMakeFiles/binding_perl_lib.dir/LibSBML.cpp.o cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/perl && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dbinding_perl_lib_EXPORTS -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/perl -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src -I/usr/lib/riscv64-linux-gnu/perl/5.40/CORE -I/build/reproducible-path/libsbml-5.20.5+dfsg/include -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/build/src/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/fbc/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/groups/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/l3v2extendedmath/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/qual/validator/constraints -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/common -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/extension -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/sbml -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/util -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator -I/build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/render/validator/constraints -isystem /usr/include/libxml2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libsbml-5.20.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -fPIC -fPIC -Wall -MD -MT src/bindings/perl/CMakeFiles/binding_perl_lib.dir/LibSBML.cpp.o -MF CMakeFiles/binding_perl_lib.dir/LibSBML.cpp.o.d -o CMakeFiles/binding_perl_lib.dir/LibSBML.cpp.o -c /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/perl/LibSBML.cpp In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:112, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLDocument.h:305, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTypes.h:48, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLTransforms.h:60, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/extension/ASTBasePlugin.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/ASTNode.h:189, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/math/FormulaFormatter.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/units/FormulaUnitsData.h:93, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/Model.h:467, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/libsbml.h:55, from /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/perl/LibSBML_wrap.cpp:2385, from /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/perl/LibSBML.cpp:9: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:200:16: warning: ‘virtual void XMLErrorLog::add(const std::__cxx11::list&)’ was hidden [-Woverloaded-virtual=] 200 | virtual void add (const std::list& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/xml/XMLErrorLog.h:211:16: warning: ‘virtual void XMLErrorLog::add(const std::vector&)’ was hidden [-Woverloaded-virtual=] 211 | virtual void add (const std::vector& errors); | ^~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBMLErrorLog.h:298:8: note: by ‘void SBMLErrorLog::add(const SBMLError&)’ 298 | void add (const SBMLError& error); | ^~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/libsbml.h:53: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/SBase.h:3629:16: warning: ‘virtual void SBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ was hidden [-Woverloaded-virtual=] 3629 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:117, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Replacing.h:68, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:137, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfReplacedElements.h:66, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBasePlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/comp-package.h:46, from /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/perl/../swig/libsbml-packages.h:4, from /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/perl/LibSBML_wrap.cpp:2389: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: note: by ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfSubmodels.h:65, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompModelPlugin.h:78, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/comp-package.h:47: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/Submodel.h:876:16: note: by ‘virtual void Submodel::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 876 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/CompBase.h:155:16: warning: ‘virtual void CompBase::readAttributes(const XMLAttributes&, const ExpectedAttributes&, bool, bool, CompSBMLErrorCode_t)’ was hidden [-Woverloaded-virtual=] 155 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h:67, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:86, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/comp-package.h:48: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/comp/sbml/ExternalModelDefinition.h:497:16: note: by ‘virtual void ExternalModelDefinition::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’ 497 | virtual void readAttributes (const XMLAttributes& attributes, | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:54, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/layout-package.h:49, from /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/perl/../swig/libsbml-packages.h:10: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:138:30: note: by ‘virtual CompartmentGlyph& CompartmentGlyph::operator=(const CompartmentGlyph&)’ 138 | virtual CompartmentGlyph& operator=(const CompartmentGlyph& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:64, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/layout-package.h:50: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/LineSegment.h:145:24: warning: ‘virtual LineSegment& LineSegment::operator=(const LineSegment&)’ was hidden [-Woverloaded-virtual=] 145 | virtual LineSegment& operator=(const LineSegment& rhs); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/CubicBezier.h:172:24: note: by ‘virtual CubicBezier& CubicBezier::operator=(const CubicBezier&)’ 172 | virtual CubicBezier& operator=(const CubicBezier& orig); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:69, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/layout-package.h:54: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesGlyph.h:136:26: note: by ‘virtual SpeciesGlyph& SpeciesGlyph::operator=(const SpeciesGlyph&)’ 136 | virtual SpeciesGlyph& operator=(const SpeciesGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:71, from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:70: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.h:142:35: note: by ‘virtual SpeciesReferenceGlyph& SpeciesReferenceGlyph::operator=(const SpeciesReferenceGlyph&)’ 142 | virtual SpeciesReferenceGlyph& operator=(const SpeciesReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.h:334:27: note: by ‘virtual ReactionGlyph& ReactionGlyph::operator=(const ReactionGlyph&)’ 334 | virtual ReactionGlyph& operator=(const ReactionGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/Layout.h:71: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:145:22: note: by ‘virtual TextGlyph& TextGlyph::operator=(const TextGlyph&)’ 145 | virtual TextGlyph& operator=(const TextGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/layout-package.h:57: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/ReferenceGlyph.h:141:28: note: by ‘virtual ReferenceGlyph& ReferenceGlyph::operator=(const ReferenceGlyph&)’ 141 | virtual ReferenceGlyph& operator=(const ReferenceGlyph& source); | ^~~~~~~~ /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GraphicalObject.h:181:29: warning: ‘virtual GraphicalObject& GraphicalObject::operator=(const GraphicalObject&)’ was hidden [-Woverloaded-virtual=] 181 | virtual GraphicalObject& operator=(const GraphicalObject& source); | ^~~~~~~~ In file included from /build/reproducible-path/libsbml-5.20.5+dfsg/src/bindings/perl/../swig/layout-package.h:58: /build/reproducible-path/libsbml-5.20.5+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:329:26: note: by ‘virtual GeneralGlyph& GeneralGlyph::operator=(const GeneralGlyph&)’ 329 | virtual GeneralGlyph& operator=(const GeneralGlyph& source); | ^~~~~~~~ [100%] Linking CXX shared module LibSBML.so cd /build/reproducible-path/libsbml-5.20.5+dfsg/build/src/bindings/perl && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_perl_lib.dir/link.txt --verbose=1 E: Build killed with signal TERM after 150 minutes of inactivity -------------------------------------------------------------------------------- Build finished at 2026-03-22T20:11:25Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup Sun, 22 Mar 2026 20:11:28 +0000 | +------------------------------------------------------------------------------+ Purging /build/reproducible-path Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died with exit 143) +------------------------------------------------------------------------------+ | Summary Sun, 22 Mar 2026 20:11:54 +0000 | +------------------------------------------------------------------------------+ Build Architecture: riscv64 Build Type: any Build-Space: 7092196 Build-Time: 48710 Distribution: unstable Fail-Stage: build Host Architecture: riscv64 Install-Time: 25 Job: /srv/rebuilderd/tmp/rebuilderdLDozCh/inputs/libsbml_5.20.5+dfsg-3.dsc Machine Architecture: riscv64 Package: libsbml Package-Time: 48855 Source-Version: 5.20.5+dfsg-3 Space: 7092196 Status: attempted Version: 5.20.5+dfsg-3 -------------------------------------------------------------------------------- Finished at 2026-03-22T20:11:25Z Build needed 13:34:15, 7092196k disk space E: Build failure (dpkg-buildpackage died with exit 143) sbuild failed