=============================================================================== About this build: this rebuild has been done as part of reproduce.debian.net where we aim to reproduce Debian binary packages distributed via ftp.debian.org, by rebuilding using the exact same packages as the original build on the buildds, as described in the relevant .buildinfo file from buildinfos.debian.net. For more information please go to https://reproduce.debian.net or join #debian-reproducible on irc.debian.org =============================================================================== Preparing download of sources for /srv/rebuilderd/tmp/rebuilderdylDjrd/inputs/consensuscore_1.1.1+dfsg-9+b2_riscv64.buildinfo Source: consensuscore Version: 1.1.1+dfsg-9 rebuilderd-worker node: riscv64-02 +------------------------------------------------------------------------------+ | Downloading sources Mon, 21 Sep 2026 00:03:14 +0000 | +------------------------------------------------------------------------------+ Get:1 https://deb.debian.org/debian trixie InRelease [140 kB] Get:2 https://deb.debian.org/debian-security trixie-security InRelease [43.4 kB] Get:3 https://deb.debian.org/debian trixie-updates InRelease [47.3 kB] Get:4 https://deb.debian.org/debian trixie-proposed-updates InRelease [57.7 kB] Get:5 https://deb.debian.org/debian trixie-backports InRelease [54.0 kB] Get:6 https://deb.debian.org/debian forky InRelease [151 kB] Get:7 https://deb.debian.org/debian sid InRelease [193 kB] Get:8 https://deb.debian.org/debian experimental InRelease [91.7 kB] Get:9 https://deb.debian.org/debian trixie/main Sources [10.5 MB] Get:10 https://deb.debian.org/debian trixie/non-free-firmware Sources [6552 B] Get:11 https://deb.debian.org/debian-security trixie-security/main Sources [231 kB] Get:12 https://deb.debian.org/debian-security trixie-security/non-free-firmware Sources [696 B] Get:13 https://deb.debian.org/debian trixie-updates/main Sources [1840 B] Get:14 https://deb.debian.org/debian trixie-proposed-updates/main Sources [95.1 kB] Get:15 https://deb.debian.org/debian trixie-backports/non-free-firmware Sources [3412 B] Get:16 https://deb.debian.org/debian trixie-backports/main Sources [309 kB] Get:17 https://deb.debian.org/debian forky/non-free-firmware Sources [7876 B] Get:18 https://deb.debian.org/debian forky/main Sources [11.3 MB] Get:19 https://deb.debian.org/debian sid/non-free-firmware Sources [10.8 kB] Get:20 https://deb.debian.org/debian sid/main Sources [12.0 MB] Get:21 https://deb.debian.org/debian experimental/non-free-firmware Sources [2568 B] Get:22 https://deb.debian.org/debian experimental/main Sources [403 kB] Fetched 35.6 MB in 24s (1463 kB/s) Reading package lists... 'https://deb.debian.org/debian/pool/main/c/consensuscore/consensuscore_1.1.1%2bdfsg-9.dsc' consensuscore_1.1.1+dfsg-9.dsc 2374 SHA256:a0bcbadeeffeec940fb157763b05a2dbba976457217dc53b04f67799f52206bf 'https://deb.debian.org/debian/pool/main/c/consensuscore/consensuscore_1.1.1%2bdfsg.orig.tar.xz' consensuscore_1.1.1+dfsg.orig.tar.xz 363936 SHA256:47865e3769e2d6647003f70ffce68f8a5b2f69a6ae04ff27d106b3ec84660d82 'https://deb.debian.org/debian/pool/main/c/consensuscore/consensuscore_1.1.1%2bdfsg-9.debian.tar.xz' consensuscore_1.1.1+dfsg-9.debian.tar.xz 10340 SHA256:4db0ae878e268792a962af9d1bc855fe16811c67404673045a7ef2dabe5f458e 47865e3769e2d6647003f70ffce68f8a5b2f69a6ae04ff27d106b3ec84660d82 consensuscore_1.1.1+dfsg.orig.tar.xz 4db0ae878e268792a962af9d1bc855fe16811c67404673045a7ef2dabe5f458e consensuscore_1.1.1+dfsg-9.debian.tar.xz a0bcbadeeffeec940fb157763b05a2dbba976457217dc53b04f67799f52206bf consensuscore_1.1.1+dfsg-9.dsc +------------------------------------------------------------------------------+ | Calling debrebuild Mon, 21 Sep 2026 00:03:42 +0000 | +------------------------------------------------------------------------------+ Rebuilding consensuscore=1.1.1+dfsg-9 in /srv/rebuilderd/tmp/rebuilderdylDjrd/inputs now. + /usr/bin/debrebuild --buildresult=/srv/rebuilderd/tmp/rebuilderdylDjrd/out --builder=sbuild+unshare --cache=/srv/rebuilderd/cache -- /srv/rebuilderd/tmp/rebuilderdylDjrd/inputs/consensuscore_1.1.1+dfsg-9+b2_riscv64.buildinfo /srv/rebuilderd/tmp/rebuilderdylDjrd/inputs/consensuscore_1.1.1+dfsg-9+b2_riscv64.buildinfo contains a GPG signature which has NOT been validated Using defined Build-Path: /build/reproducible-path/consensuscore-1.1.1+dfsg I: verifying dsc... successful! WARNING:root:found partial file in cache, consider deleting it manually: /srv/rebuilderd/cache/archive/debian/20260916T142841Z/dists/forky/main/binary-riscv64/by-hash/SHA256/568285489acae4276a087b4aebc7174a1e1e3952b34acff9dd268f2ff13d2f93.47915.part Get:1 http://deb.debian.org/debian unstable InRelease [193 kB] Get:2 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable InRelease [193 kB] Get:3 http://deb.debian.org/debian unstable/main riscv64 Packages [10.3 MB] Get:4 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 Packages [10.3 MB] Fetched 21.1 MB in 14s (1474 kB/s) Reading package lists... W: http://snapshot.debian.org/archive/debian/20260907T142631Z/dists/unstable/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted Get:1 http://deb.debian.org/debian unstable/main riscv64 libacl1 riscv64 2.4.0-1 [37.1 kB] Get:2 http://deb.debian.org/debian unstable/main riscv64 architecture-properties riscv64 0.2.6+b2 [2636 B] Get:3 http://deb.debian.org/debian unstable/main riscv64 libattr1 riscv64 1:2.6.0-1 [24.7 kB] Get:4 http://deb.debian.org/debian unstable/main riscv64 autoconf all 2.73-2 [516 kB] Get:5 http://deb.debian.org/debian unstable/main riscv64 autotools-dev all 20240727.1+nmu1 [60.0 kB] Get:6 http://deb.debian.org/debian unstable/main riscv64 base-files riscv64 14.2 [87.9 kB] Get:7 http://deb.debian.org/debian unstable/main riscv64 base-passwd riscv64 3.6.8 [54.8 kB] Get:8 http://deb.debian.org/debian unstable/main riscv64 bash riscv64 5.3-4 [1560 kB] Get:9 http://deb.debian.org/debian unstable/main riscv64 libboost-dev riscv64 1.90.0.2+nmu1 [3200 B] Get:10 http://deb.debian.org/debian unstable/main riscv64 libboost1.90-dev riscv64 1.90.0-6.1+b1 [11.3 MB] Get:11 http://deb.debian.org/debian unstable/main riscv64 build-essential riscv64 12.12 [4628 B] Get:12 http://deb.debian.org/debian unstable/main riscv64 bzip2 riscv64 1.0.8-6+b2 [40.2 kB] Get:13 http://deb.debian.org/debian unstable/main riscv64 libbz2-1.0 riscv64 1.0.8-6+b2 [39.6 kB] Get:14 http://deb.debian.org/debian unstable/main riscv64 libdebconfclient0 riscv64 0.283 [7424 B] Get:15 http://deb.debian.org/debian unstable/main riscv64 coreutils riscv64 9.10-1 [3128 kB] Get:16 http://deb.debian.org/debian unstable/main riscv64 dash riscv64 0.5.12-12 [101 kB] Get:17 http://deb.debian.org/debian unstable/main riscv64 libdb5.3t64 riscv64 5.3.28+dfsg2-11+b1 [719 kB] Get:18 http://deb.debian.org/debian unstable/main riscv64 debconf all 1.5.92 [123 kB] Get:19 http://deb.debian.org/debian unstable/main riscv64 debianutils riscv64 5.24 [92.5 kB] Get:20 http://deb.debian.org/debian unstable/main riscv64 dh-exec riscv64 0.31 [25.3 kB] Get:21 http://deb.debian.org/debian unstable/main riscv64 dh-python all 7.20260623 [114 kB] Get:22 http://deb.debian.org/debian unstable/main riscv64 diffutils riscv64 1:3.12-1 [405 kB] Get:23 http://deb.debian.org/debian unstable/main riscv64 dwz riscv64 0.17-1 [115 kB] Get:24 http://deb.debian.org/debian unstable/main riscv64 libelf1t64 riscv64 0.196-1 [62.9 kB] Get:25 http://deb.debian.org/debian unstable/main riscv64 libexpat1 riscv64 2.8.4-1 [123 kB] Get:26 http://deb.debian.org/debian unstable/main riscv64 libexpat1-dev riscv64 2.8.4-1 [383 kB] Get:27 http://deb.debian.org/debian unstable/main riscv64 file riscv64 1:5.47-4 [42.8 kB] Get:28 http://deb.debian.org/debian unstable/main riscv64 libmagic-mgc riscv64 1:5.47-4 [345 kB] Get:29 http://deb.debian.org/debian unstable/main riscv64 libmagic1t64 riscv64 1:5.47-4 [117 kB] Get:30 http://deb.debian.org/debian unstable/main riscv64 findutils riscv64 4.11.0-2 [785 kB] Get:31 http://deb.debian.org/debian unstable/main riscv64 cpp-16 riscv64 16.2.0-2 [1272 B] Get:32 http://deb.debian.org/debian unstable/main riscv64 cpp-16-riscv64-linux-gnu riscv64 16.2.0-2 [114 MB] Get:33 http://deb.debian.org/debian unstable/main riscv64 g++-16 riscv64 16.2.0-2 [35.2 kB] Get:34 http://deb.debian.org/debian unstable/main riscv64 g++-16-riscv64-linux-gnu riscv64 16.2.0-2 [121 MB] Get:35 http://deb.debian.org/debian unstable/main riscv64 gcc-16 riscv64 16.2.0-2 [524 kB] Get:36 http://deb.debian.org/debian unstable/main riscv64 gcc-16-base riscv64 16.2.0-2 [38.4 kB] Get:37 http://deb.debian.org/debian unstable/main riscv64 gcc-16-riscv64-linux-gnu riscv64 16.2.0-2 [128 MB] Get:38 http://deb.debian.org/debian unstable/main riscv64 libasan8 riscv64 16.2.0-2 [2993 kB] Get:39 http://deb.debian.org/debian unstable/main riscv64 libatomic1 riscv64 16.2.0-2 [8508 B] Get:40 http://deb.debian.org/debian unstable/main riscv64 libcc1-0 riscv64 16.2.0-2 [41.7 kB] Get:41 http://deb.debian.org/debian unstable/main riscv64 libgcc-16-dev riscv64 16.2.0-2 [5876 kB] Get:42 http://deb.debian.org/debian unstable/main riscv64 libgcc-s1 riscv64 16.2.0-2 [74.2 kB] Get:43 http://deb.debian.org/debian unstable/main riscv64 libgfortran5 riscv64 16.2.0-2 [416 kB] Get:44 http://deb.debian.org/debian unstable/main riscv64 libgomp1 riscv64 16.2.0-2 [137 kB] Get:45 http://deb.debian.org/debian unstable/main riscv64 libitm1 riscv64 16.2.0-2 [25.6 kB] Get:46 http://deb.debian.org/debian unstable/main riscv64 liblsan0 riscv64 16.2.0-2 [1342 kB] Get:47 http://deb.debian.org/debian unstable/main riscv64 cpp riscv64 4:16.1.0-3 [1568 B] Get:48 http://deb.debian.org/debian unstable/main riscv64 cpp-riscv64-linux-gnu riscv64 4:16.1.0-3 [4464 B] Get:49 http://deb.debian.org/debian unstable/main riscv64 g++ riscv64 4:16.1.0-3 [1324 B] Get:50 http://deb.debian.org/debian unstable/main riscv64 g++-riscv64-linux-gnu riscv64 4:16.1.0-3 [1196 B] Get:51 http://deb.debian.org/debian unstable/main riscv64 gcc riscv64 4:16.1.0-3 [5144 B] Get:52 http://deb.debian.org/debian unstable/main riscv64 gcc-riscv64-linux-gnu riscv64 4:16.1.0-3 [1432 B] Get:53 http://deb.debian.org/debian unstable/main riscv64 libgdbm-compat4t64 riscv64 1.26-1+b2 [52.1 kB] Get:54 http://deb.debian.org/debian unstable/main riscv64 libgdbm6t64 riscv64 1.26-1+b2 [78.1 kB] Get:55 http://deb.debian.org/debian unstable/main riscv64 libgmp10 riscv64 2:6.3.0+dfsg-5+b2 [561 kB] Get:56 http://deb.debian.org/debian unstable/main riscv64 grep riscv64 3.12-1 [442 kB] Get:57 http://deb.debian.org/debian unstable/main riscv64 groff-base riscv64 1.24.1-1 [1311 kB] Get:58 http://deb.debian.org/debian unstable/main riscv64 gzip riscv64 1.14-1 [144 kB] Get:59 http://deb.debian.org/debian unstable/main riscv64 hostname riscv64 3.25 [10.7 kB] Get:60 http://deb.debian.org/debian unstable/main riscv64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:61 http://deb.debian.org/debian unstable/main riscv64 libisl23 riscv64 0.28-1 [666 kB] Get:62 http://deb.debian.org/debian unstable/main riscv64 libjansson4 riscv64 2.15.1-1 [65.1 kB] Get:63 http://deb.debian.org/debian unstable/main riscv64 libblas3 riscv64 3.12.1-8 [120 kB] Get:64 http://deb.debian.org/debian unstable/main riscv64 liblapack3 riscv64 3.12.1-8 [1972 kB] Get:65 http://deb.debian.org/debian unstable/main riscv64 libarchive-zip-perl all 1.68-1 [104 kB] Get:66 http://deb.debian.org/debian unstable/main riscv64 libffi8 riscv64 3.8.0-2 [26.7 kB] Get:67 http://deb.debian.org/debian unstable/main riscv64 libmd0 riscv64 1.2.0-2 [44.0 kB] Get:68 http://deb.debian.org/debian unstable/main riscv64 libcrypt1 riscv64 1:4.5.2+20251210-1 [113 kB] Get:69 http://deb.debian.org/debian unstable/main riscv64 dh-strip-nondeterminism all 1.15.1-1 [6020 B] Get:70 http://deb.debian.org/debian unstable/main riscv64 libfile-stripnondeterminism-perl all 1.15.1-1 [17.1 kB] Get:71 http://deb.debian.org/debian unstable/main riscv64 bsdextrautils riscv64 2.42.3-1 [103 kB] Get:72 http://deb.debian.org/debian unstable/main riscv64 libblkid1 riscv64 2.42.3-1 [193 kB] Get:73 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 libaudit-common all 1:4.1.2-1 [14.3 kB] Get:74 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 libaudit1 riscv64 1:4.1.2-1+b2 [57.0 kB] Get:75 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 automake all 1:1.18.1-4 [877 kB] Get:76 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 binutils riscv64 2.47-2 [285 kB] Get:77 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 binutils-common riscv64 2.47-2 [2685 kB] Get:78 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 binutils-riscv64-linux-gnu riscv64 2.47-2 [907 kB] Get:79 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 libbinutils riscv64 2.47-2 [509 kB] Get:80 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 libctf-nobfd0 riscv64 2.47-2 [163 kB] Get:81 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 libctf0 riscv64 2.47-2 [95.7 kB] Get:82 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 libgprofng0 riscv64 2.47-2 [722 kB] Get:83 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 debhelper all 14.3 [934 kB] Get:84 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 libdebhelper-perl all 14.3 [77.3 kB] Get:85 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 dh-autoreconf all 22 [12.2 kB] Get:86 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 dpkg riscv64 1.23.7 [1534 kB] Get:87 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 dpkg-dev all 1.23.7 [1318 kB] Get:88 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 libdpkg-perl all 1.23.7 [669 kB] Get:89 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 autopoint all 1.0-3 [820 kB] Get:90 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 gettext riscv64 1.0-3 [2657 kB] Get:91 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 gettext-base riscv64 1.0-3 [331 kB] Get:92 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 libc-bin riscv64 2.43-5 [586 kB] Get:93 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 libc-dev-bin riscv64 2.43-5 [38.2 kB] Get:94 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 libc-gconv-modules-extra riscv64 2.43-5 [1105 kB] Get:95 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 libc6 riscv64 2.43-5 [1464 kB] Get:96 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 libc6-dev riscv64 2.43-5 [3502 kB] Get:97 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 init-system-helpers all 1.69+nmu1 [37.1 kB] Get:98 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 libcap-ng0 riscv64 0.9.5-2 [18.0 kB] Get:99 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 libjs-sphinxdoc all 9.1.0-7 [46.1 kB] Get:100 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 liblzma5 riscv64 5.8.3-1 [334 kB] Fetched 423 MB in 24s (17.7 MB/s) dpkg-name: info: moved 'libmagic1t64_1%3a5.47-4_riscv64.deb' to '/srv/rebuilderd/tmp/tmpyry14z7k/libmagic1t64_5.47-4_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/gzip_1.14-1_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libc-gconv-modules-extra_2.43-5_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libc-dev-bin_2.43-5_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libelf1t64_0.196-1_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libboost1.90-dev_1.90.0-6.1+b1_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/g++-16-riscv64-linux-gnu_16.2.0-2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libasan8_16.2.0-2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/init-system-helpers_1.69+nmu1_all.deb' dpkg-name: info: moved 'cpp_4%3a16.1.0-3_riscv64.deb' to '/srv/rebuilderd/tmp/tmpyry14z7k/cpp_16.1.0-3_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libc6_2.43-5_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/liblapack3_3.12.1-8_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libblkid1_2.42.3-1_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/bash_5.3-4_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libgdbm6t64_1.26-1+b2_riscv64.deb' dpkg-name: info: moved 'file_1%3a5.47-4_riscv64.deb' to '/srv/rebuilderd/tmp/tmpyry14z7k/file_5.47-4_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libisl23_0.28-1_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/dpkg-dev_1.23.7_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/groff-base_1.24.1-1_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libcap-ng0_0.9.5-2_riscv64.deb' dpkg-name: info: moved 'automake_1%3a1.18.1-4_all.deb' to '/srv/rebuilderd/tmp/tmpyry14z7k/automake_1.18.1-4_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/dh-autoreconf_22_all.deb' dpkg-name: info: moved 'diffutils_1%3a3.12-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpyry14z7k/diffutils_3.12-1_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libc6-dev_2.43-5_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/dwz_0.17-1_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libexpat1-dev_2.8.4-1_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libdebhelper-perl_14.3_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libarchive-zip-perl_1.68-1_all.deb' dpkg-name: info: moved 'libcrypt1_1%3a4.5.2+20251210-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpyry14z7k/libcrypt1_4.5.2+20251210-1_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/dh-strip-nondeterminism_1.15.1-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libbz2-1.0_1.0.8-6+b2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libblas3_3.12.1-8_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libgomp1_16.2.0-2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/binutils-riscv64-linux-gnu_2.47-2_riscv64.deb' dpkg-name: info: moved 'g++-riscv64-linux-gnu_4%3a16.1.0-3_riscv64.deb' to '/srv/rebuilderd/tmp/tmpyry14z7k/g++-riscv64-linux-gnu_16.1.0-3_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libexpat1_2.8.4-1_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/bzip2_1.0.8-6+b2_riscv64.deb' dpkg-name: info: moved 'libmagic-mgc_1%3a5.47-4_riscv64.deb' to '/srv/rebuilderd/tmp/tmpyry14z7k/libmagic-mgc_5.47-4_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libacl1_2.4.0-1_riscv64.deb' dpkg-name: info: moved 'libgmp10_2%3a6.3.0+dfsg-5+b2_riscv64.deb' to '/srv/rebuilderd/tmp/tmpyry14z7k/libgmp10_6.3.0+dfsg-5+b2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libjansson4_2.15.1-1_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/autotools-dev_20240727.1+nmu1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/coreutils_9.10-1_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/architecture-properties_0.2.6+b2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libgprofng0_2.47-2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/build-essential_12.12_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libdpkg-perl_1.23.7_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/base-passwd_3.6.8_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libatomic1_16.2.0-2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libcc1-0_16.2.0-2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libgfortran5_16.2.0-2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libmd0_1.2.0-2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libfile-stripnondeterminism-perl_1.15.1-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/bsdextrautils_2.42.3-1_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libjs-sphinxdoc_9.1.0-7_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/g++-16_16.2.0-2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/debianutils_5.24_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libitm1_16.2.0-2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/gcc-16-riscv64-linux-gnu_16.2.0-2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/gettext-base_1.0-3_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libgcc-s1_16.2.0-2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libdb5.3t64_5.3.28+dfsg2-11+b1_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libctf0_2.47-2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libbinutils_2.47-2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/hostname_3.25_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/dh-python_7.20260623_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/gcc-16_16.2.0-2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libffi8_3.8.0-2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/dh-exec_0.31_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/liblsan0_16.2.0-2_riscv64.deb' dpkg-name: info: moved 'libaudit1_1%3a4.1.2-1+b2_riscv64.deb' to '/srv/rebuilderd/tmp/tmpyry14z7k/libaudit1_4.1.2-1+b2_riscv64.deb' dpkg-name: info: moved 'cpp-riscv64-linux-gnu_4%3a16.1.0-3_riscv64.deb' to '/srv/rebuilderd/tmp/tmpyry14z7k/cpp-riscv64-linux-gnu_16.1.0-3_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/autoconf_2.73-2_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/cpp-16-riscv64-linux-gnu_16.2.0-2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/debhelper_14.3_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/intltool-debian_0.35.0+20060710.6_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/dash_0.5.12-12_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/cpp-16_16.2.0-2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libboost-dev_1.90.0.2+nmu1_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/autopoint_1.0-3_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/findutils_4.11.0-2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/base-files_14.2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libctf-nobfd0_2.47-2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/binutils-common_2.47-2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/binutils_2.47-2_riscv64.deb' dpkg-name: info: moved 'g++_4%3a16.1.0-3_riscv64.deb' to '/srv/rebuilderd/tmp/tmpyry14z7k/g++_16.1.0-3_riscv64.deb' dpkg-name: info: moved 'libaudit-common_1%3a4.1.2-1_all.deb' to '/srv/rebuilderd/tmp/tmpyry14z7k/libaudit-common_4.1.2-1_all.deb' dpkg-name: info: moved 'gcc_4%3a16.1.0-3_riscv64.deb' to '/srv/rebuilderd/tmp/tmpyry14z7k/gcc_16.1.0-3_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libc-bin_2.43-5_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/gcc-16-base_16.2.0-2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libdebconfclient0_0.283_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/grep_3.12-1_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libgcc-16-dev_16.2.0-2_riscv64.deb' dpkg-name: info: moved 'gcc-riscv64-linux-gnu_4%3a16.1.0-3_riscv64.deb' to '/srv/rebuilderd/tmp/tmpyry14z7k/gcc-riscv64-linux-gnu_16.1.0-3_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/dpkg_1.23.7_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/gettext_1.0-3_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/libgdbm-compat4t64_1.26-1+b2_riscv64.deb' dpkg-name: info: moved 'libattr1_1%3a2.6.0-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpyry14z7k/libattr1_2.6.0-1_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/liblzma5_5.8.3-1_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyry14z7k/debconf_1.5.92_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libstdc++-16-dev riscv64 16.2.0-2 [10.6 MB] Get:2 http://deb.debian.org/debian unstable/main riscv64 libstdc++6 riscv64 16.2.0-2 [776 kB] Get:3 http://deb.debian.org/debian unstable/main riscv64 libtsan2 riscv64 16.2.0-2 [2706 kB] Get:4 http://deb.debian.org/debian unstable/main riscv64 libubsan1 riscv64 16.2.0-2 [1191 kB] Get:5 http://deb.debian.org/debian unstable/main riscv64 python3-jaraco.context all 6.0.1-2 [8184 B] Get:6 http://deb.debian.org/debian unstable/main riscv64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get:7 http://deb.debian.org/debian unstable/main riscv64 libpipeline1 riscv64 1.5.8-3 [48.2 kB] Get:8 http://deb.debian.org/debian unstable/main riscv64 libselinux1 riscv64 3.11-2 [90.4 kB] Get:9 http://deb.debian.org/debian unstable/main riscv64 libunistring5 riscv64 1.4.2-1 [475 kB] Get:10 http://deb.debian.org/debian unstable/main riscv64 libxml2-16 riscv64 2.15.4+dfsg-1 [649 kB] Get:11 http://deb.debian.org/debian unstable/main riscv64 libzstd1 riscv64 1.5.7+dfsg-4 [368 kB] Get:12 http://deb.debian.org/debian unstable/main riscv64 linux-libc-dev all 7.1.13-1 [2064 kB] Get:13 http://deb.debian.org/debian unstable/main riscv64 m4 riscv64 1.4.21-1 [330 kB] Get:14 http://deb.debian.org/debian unstable/main riscv64 make riscv64 4.4.1-3 [463 kB] Get:15 http://deb.debian.org/debian unstable/main riscv64 man-db riscv64 2.13.1-1 [1458 kB] Get:16 http://deb.debian.org/debian unstable/main riscv64 mawk riscv64 1.3.4.20260302-1 [142 kB] Get:17 http://deb.debian.org/debian unstable/main riscv64 media-types all 14.0.0 [30.8 kB] Get:18 http://deb.debian.org/debian unstable/main riscv64 python3-more-itertools all 11.1.0-2 [74.5 kB] Get:19 http://deb.debian.org/debian unstable/main riscv64 libmpc3 riscv64 1.3.1-3 [56.5 kB] Get:20 http://deb.debian.org/debian unstable/main riscv64 libmpfr6 riscv64 4.2.2-3 [666 kB] Get:21 http://deb.debian.org/debian unstable/main riscv64 libncursesw6 riscv64 6.6+20260608-2 [141 kB] Get:22 http://deb.debian.org/debian unstable/main riscv64 libtinfo6 riscv64 6.6+20260608-2 [351 kB] Get:23 http://deb.debian.org/debian unstable/main riscv64 ncurses-base all 6.6+20260608-2 [276 kB] Get:24 http://deb.debian.org/debian unstable/main riscv64 ncurses-bin riscv64 6.6+20260608-2 [442 kB] Get:25 http://deb.debian.org/debian unstable/main riscv64 netbase all 6.6 [10.3 kB] Get:26 http://deb.debian.org/debian unstable/main riscv64 python3-numpy riscv64 1:2.4.6+ds-4+b1 [3722 kB] Get:27 http://deb.debian.org/debian unstable/main riscv64 python3-numpy-dev riscv64 1:2.4.6+ds-4+b1 [187 kB] Get:28 http://deb.debian.org/debian unstable/main riscv64 libssl3t64 riscv64 3.6.4-1 [2276 kB] Get:29 http://deb.debian.org/debian unstable/main riscv64 openssl-provider-legacy riscv64 3.6.4-1 [326 kB] Get:30 http://deb.debian.org/debian unstable/main riscv64 libpam-modules riscv64 1.7.0-8 [165 kB] Get:31 http://deb.debian.org/debian unstable/main riscv64 libpam-modules-bin riscv64 1.7.0-8 [46.2 kB] Get:32 http://deb.debian.org/debian unstable/main riscv64 libpam-runtime all 1.7.0-8 [246 kB] Get:33 http://deb.debian.org/debian unstable/main riscv64 libpam0g riscv64 1.7.0-8 [66.9 kB] Get:34 http://deb.debian.org/debian unstable/main riscv64 patch riscv64 2.8-2 [134 kB] Get:35 http://deb.debian.org/debian unstable/main riscv64 libperl5.42 riscv64 5.42.3-1 [3853 kB] Get:36 http://deb.debian.org/debian unstable/main riscv64 perl riscv64 5.42.3-1 [266 kB] Get:37 http://deb.debian.org/debian unstable/main riscv64 perl-base riscv64 5.42.3-1 [1846 kB] Get:38 http://deb.debian.org/debian unstable/main riscv64 perl-modules-5.42 all 5.42.3-1 [3213 kB] Get:39 http://deb.debian.org/debian unstable/main riscv64 po-debconf all 1.0.22 [216 kB] Get:40 http://deb.debian.org/debian unstable/main riscv64 python3-autocommand all 2.2.2-4 [13.7 kB] Get:41 http://deb.debian.org/debian unstable/main riscv64 python3-inflect all 7.5.0-2 [32.8 kB] Get:42 http://deb.debian.org/debian unstable/main riscv64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get:43 http://deb.debian.org/debian unstable/main riscv64 python3-typeguard all 4.4.4-3 [37.1 kB] Get:44 http://deb.debian.org/debian unstable/main riscv64 python3-typing-extensions all 4.16.0-5 [95.2 kB] Get:45 http://deb.debian.org/debian unstable/main riscv64 libpython3-all-dev riscv64 3.14.7-3 [1012 B] Get:46 http://deb.debian.org/debian unstable/main riscv64 libpython3-dev riscv64 3.14.7-3 [8488 B] Get:47 http://deb.debian.org/debian unstable/main riscv64 libpython3-stdlib riscv64 3.14.7-3 [8252 B] Get:48 http://deb.debian.org/debian unstable/main riscv64 python3 riscv64 3.14.7-3 [26.0 kB] Get:49 http://deb.debian.org/debian unstable/main riscv64 python3-all riscv64 3.14.7-3 [984 B] Get:50 http://deb.debian.org/debian unstable/main riscv64 python3-all-dev riscv64 3.14.7-3 [1008 B] Get:51 http://deb.debian.org/debian unstable/main riscv64 python3-dev riscv64 3.14.7-3 [26.7 kB] Get:52 http://deb.debian.org/debian unstable/main riscv64 python3-minimal riscv64 3.14.7-3 [25.3 kB] Get:53 http://deb.debian.org/debian unstable/main riscv64 libreadline8t64 riscv64 8.3-4 [180 kB] Get:54 http://deb.debian.org/debian unstable/main riscv64 readline-common all 8.3-4 [74.8 kB] Get:55 http://deb.debian.org/debian unstable/main riscv64 sed riscv64 4.9-3 [329 kB] Get:56 http://deb.debian.org/debian unstable/main riscv64 sensible-utils all 0.0.26 [27.0 kB] Get:57 http://deb.debian.org/debian unstable/main riscv64 python3-pkg-resources all 80.9.0-2 [224 kB] Get:58 http://deb.debian.org/debian unstable/main riscv64 libsimde-dev all 0.8.4~rc3-5 [500 kB] Get:59 http://deb.debian.org/debian unstable/main riscv64 libsqlite3-0 riscv64 3.53.4-2 [957 kB] Get:60 http://deb.debian.org/debian unstable/main riscv64 sysvinit-utils riscv64 3.18-1 [29.3 kB] Get:61 http://deb.debian.org/debian unstable/main riscv64 tzdata all 2026c-1 [260 kB] Get:62 http://deb.debian.org/debian unstable/main riscv64 libuchardet0 riscv64 0.0.8-2+b2 [68.8 kB] Get:63 http://deb.debian.org/debian unstable/main riscv64 libmount1 riscv64 2.42.3-1 [228 kB] Get:64 http://deb.debian.org/debian unstable/main riscv64 libsmartcols1 riscv64 2.42.3-1 [154 kB] Get:65 http://deb.debian.org/debian unstable/main riscv64 libuuid1 riscv64 2.42.3-1 [35.2 kB] Get:66 http://deb.debian.org/debian unstable/main riscv64 util-linux riscv64 2.42.3-1 [1223 kB] Get:67 http://deb.debian.org/debian unstable/main riscv64 zlib1g riscv64 1:1.3.dfsg+really1.3.2-3 [87.3 kB] Get:68 http://deb.debian.org/debian unstable/main riscv64 zlib1g-dev riscv64 1:1.3.dfsg+really1.3.2-3 [991 kB] Get:69 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 libsframe3 riscv64 2.47-2 [86.0 kB] Get:70 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 libtool all 2.6.2-2 [553 kB] Get:71 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 libpcre2-8-0 riscv64 10.48-2 [310 kB] Get:72 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 python3-zipp all 3.23.0-1 [11.0 kB] Get:73 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 libpython3.14 riscv64 3.14.7-3 [2305 kB] Get:74 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 libpython3.14-dev riscv64 3.14.7-3 [17.6 MB] Get:75 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 libpython3.14-minimal riscv64 3.14.7-3 [896 kB] Get:76 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 libpython3.14-stdlib riscv64 3.14.7-3 [2323 kB] Get:77 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 python3.14 riscv64 3.14.7-3 [861 kB] Get:78 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 python3.14-dev riscv64 3.14.7-3 [515 kB] Get:79 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 python3.14-minimal riscv64 3.14.7-3 [2301 kB] Get:80 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 python3-setuptools all 80.9.0-2 [698 kB] Get:81 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 swig riscv64 4.5.0-3 [1520 kB] Get:82 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 libsystemd0 riscv64 262~rc1-2 [482 kB] Get:83 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 libudev1 riscv64 262~rc1-2 [141 kB] Get:84 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 tar riscv64 1.35+dfsg-5 [821 kB] Get:85 http://snapshot.debian.org/archive/debian/20260907T142631Z unstable/main riscv64 xz-utils riscv64 5.8.3-1 [739 kB] Fetched 77.8 MB in 5s (16.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprh4hv17g/perl-base_5.42.3-1_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprh4hv17g/tar_1.35+dfsg-5_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprh4hv17g/python3-jaraco.functools_4.1.0-1_all.deb' dpkg-name: 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'/srv/rebuilderd/tmp/tmprh4hv17g/swig_4.5.0-3_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprh4hv17g/python3-setuptools_80.9.0-2_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprh4hv17g/libstdc++-16-dev_16.2.0-2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprh4hv17g/libpam-modules-bin_1.7.0-8_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprh4hv17g/libpython3.14-minimal_3.14.7-3_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprh4hv17g/m4_1.4.21-1_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprh4hv17g/libsmartcols1_2.42.3-1_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprh4hv17g/libsframe3_2.47-2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprh4hv17g/libuuid1_2.42.3-1_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprh4hv17g/python3-typeguard_4.4.4-3_all.deb' dpkg-name: warning: skipping 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'/srv/rebuilderd/tmp/tmprh4hv17g/util-linux_2.42.3-1_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprh4hv17g/tzdata_2026c-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprh4hv17g/ncurses-base_6.6+20260608-2_all.deb' dpkg-name: info: moved 'zlib1g_1%3a1.3.dfsg+really1.3.2-3_riscv64.deb' to '/srv/rebuilderd/tmp/tmprh4hv17g/zlib1g_1.3.dfsg+really1.3.2-3_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprh4hv17g/libuchardet0_0.0.8-2+b2_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprh4hv17g/libpython3-stdlib_3.14.7-3_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprh4hv17g/libreadline8t64_8.3-4_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprh4hv17g/libmpc3_1.3.1-3_riscv64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprh4hv17g/python3-jaraco.context_6.0.1-2_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprh4hv17g/sysvinit-utils_3.18-1_riscv64.deb' dpkg-name: 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'/srv/rebuilderd/tmp/tmprh4hv17g/perl-modules-5.42_5.42.3-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprh4hv17g/python3-zipp_3.23.0-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprh4hv17g/python3-all_3.14.7-3_riscv64.deb' dpkg-buildpackage: info: source package debootsnap-dummy dpkg-buildpackage: info: source version 1.0 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Equivs Dummy Package Generator dpkg-buildpackage: info: host architecture riscv64 dpkg-source --before-build . debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/debootsnap-dummy/ dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'debootsnap-dummy' in '../debootsnap-dummy_1.0_all.deb'. dpkg-genbuildinfo --build=binary -O../debootsnap-dummy_1.0_riscv64.buildinfo dpkg-genchanges --build=binary -O../debootsnap-dummy_1.0_riscv64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) The package has been created. Attention, the package has been created in the /srv/rebuilderd/tmp/tmpzy_rwtv1/cache directory, not in ".." as indicated by the message above! I: automatically chosen mode: unshare I: chroot architecture riscv64 is equal to the host's architecture I: using /srv/rebuilderd/tmp/mmdebstrap.wnnNep7dCf as tempdir I: running --setup-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/setup00.sh /srv/rebuilderd/tmp/mmdebstrap.wnnNep7dCf 127.0.0.1 - - [21/Sep/2026 08:06:13] code 404, message File not found 127.0.0.1 - - [21/Sep/2026 08:06:13] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:37927 ./ InRelease 127.0.0.1 - - [21/Sep/2026 08:06:13] "GET /./Release HTTP/1.1" 200 - Get:2 http://localhost:37927 ./ Release [462 B] 127.0.0.1 - - [21/Sep/2026 08:06:13] code 404, message File not found 127.0.0.1 - - [21/Sep/2026 08:06:13] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:37927 ./ Release.gpg 127.0.0.1 - - [21/Sep/2026 08:06:13] "GET /./Packages HTTP/1.1" 200 - Get:4 http://localhost:37927 ./ Packages [225 kB] Fetched 225 kB in 0s (1721 kB/s) Reading package lists... usr-is-merged found but not real -- not running merged-usr setup hook I: skipping apt-get update because it was already run I: downloading packages with apt... 127.0.0.1 - 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127.0.0.1 - - [21/Sep/2026 08:06:16] "GET /./sysvinit-utils_3.18-1_riscv64.deb HTTP/1.1" 200 - I: extracting archives... I: running --extract-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/extract00.sh /srv/rebuilderd/tmp/mmdebstrap.wnnNep7dCf 127.0.0.1 - - [21/Sep/2026 08:06:25] code 404, message File not found 127.0.0.1 - - [21/Sep/2026 08:06:25] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:37927 ./ InRelease 127.0.0.1 - - [21/Sep/2026 08:06:25] "GET /./Release HTTP/1.1" 304 - Hit:2 http://localhost:37927 ./ Release 127.0.0.1 - - [21/Sep/2026 08:06:25] code 404, message File not found 127.0.0.1 - - [21/Sep/2026 08:06:25] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:37927 ./ Release.gpg Reading package lists... usr-is-merged found but not real -- not running merged-usr extract hook I: installing essential packages... 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127.0.0.1 - - [21/Sep/2026 08:07:26] "GET /./libpython3.14-dev_3.14.7-3_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Sep/2026 08:07:28] "GET /./libpython3-dev_3.14.7-3_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Sep/2026 08:07:28] "GET /./libpython3-all-dev_3.14.7-3_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Sep/2026 08:07:28] "GET /./python3-zipp_3.23.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Sep/2026 08:07:28] "GET /./python3-autocommand_2.2.2-4_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Sep/2026 08:07:28] "GET /./python3-typing-extensions_4.16.0-5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Sep/2026 08:07:28] "GET /./python3-typeguard_4.4.4-3_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Sep/2026 08:07:28] "GET /./python3-inflect_7.5.0-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Sep/2026 08:07:28] "GET /./libboost1.90-dev_1.90.0-6.1%2bb1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Sep/2026 08:07:29] "GET /./python3-jaraco.context_6.0.1-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Sep/2026 08:07:29] "GET /./python3-pkg-resources_80.9.0-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Sep/2026 08:07:29] "GET /./python3-jaraco.text_4.0.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Sep/2026 08:07:29] "GET /./python3-setuptools_80.9.0-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Sep/2026 08:07:29] "GET /./swig_4.5.0-3_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Sep/2026 08:07:29] "GET /./libsimde-dev_0.8.4%7erc3-5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Sep/2026 08:07:29] "GET /./dh-exec_0.31_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Sep/2026 08:07:29] "GET /./python3-all_3.14.7-3_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Sep/2026 08:07:29] "GET /./libboost-dev_1.90.0.2%2bnmu1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Sep/2026 08:07:29] "GET /./python3.14-dev_3.14.7-3_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Sep/2026 08:07:29] "GET /./python3-dev_3.14.7-3_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Sep/2026 08:07:29] "GET /./dh-python_7.20260623_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Sep/2026 08:07:29] "GET /./python3-all-dev_3.14.7-3_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Sep/2026 08:07:29] "GET /./debootsnap-dummy_1.0_all.deb HTTP/1.1" 200 - I: running --customize-hook directly: /srv/rebuilderd/tmp/tmpzy_rwtv1/apt_install.sh /srv/rebuilderd/tmp/mmdebstrap.wnnNep7dCf Reading package lists... Building dependency tree... Reading state information... gzip is already the newest version (1.14-1). gcc is already the newest version (4:16.1.0-3). gcc set to manually installed. cpp-riscv64-linux-gnu is already the newest version (4:16.1.0-3). cpp-riscv64-linux-gnu set to manually installed. libc-gconv-modules-extra is already the newest version (2.43-5). libc-dev-bin is already the newest version (2.43-5). libc-dev-bin set to manually installed. libelf1t64 is already the newest version (0.196-1). libelf1t64 set to manually installed. libboost1.90-dev is already the newest version (1.90.0-6.1+b1). libboost1.90-dev set to manually installed. g++-16-riscv64-linux-gnu is already the newest version (16.2.0-2). g++-16-riscv64-linux-gnu set to manually installed. libasan8 is already the newest version (16.2.0-2). libasan8 set to manually installed. init-system-helpers is already the newest version (1.69+nmu1). libc6 is already the newest version (2.43-5). automake is already the newest version (1:1.18.1-4). automake set to manually installed. liblapack3 is already the newest version (3.12.1-8). liblapack3 set to manually installed. libblkid1 is already the newest version (2.42.3-1). bash is already the newest version (5.3-4). libgdbm6t64 is already the newest version (1.26-1+b2). libgdbm6t64 set to manually installed. libisl23 is already the newest version (0.28-1). libisl23 set to manually installed. dpkg-dev is already the newest version (1.23.7). dpkg-dev set to manually installed. cpp is already the newest version (4:16.1.0-3). cpp set to manually installed. groff-base is already the newest version (1.24.1-1). groff-base set to manually installed. libcap-ng0 is already the newest version (0.9.5-2). dh-autoreconf is already the newest version (22). dh-autoreconf set to manually installed. libc6-dev is already the newest version (2.43-5). libc6-dev set to manually installed. dwz is already the newest version (0.17-1). dwz set to manually installed. libexpat1-dev is already the newest version (2.8.4-1). libexpat1-dev set to manually installed. libdebhelper-perl is already the newest version (14.3). libdebhelper-perl set to manually installed. libarchive-zip-perl is already the newest version (1.68-1). libarchive-zip-perl set to manually installed. dh-strip-nondeterminism is already the newest version (1.15.1-1). dh-strip-nondeterminism set to manually installed. libbz2-1.0 is already the newest version (1.0.8-6+b2). libblas3 is already the newest version (3.12.1-8). libblas3 set to manually installed. g++-riscv64-linux-gnu is already the newest version (4:16.1.0-3). g++-riscv64-linux-gnu set to manually installed. libgomp1 is already the newest version (16.2.0-2). libgomp1 set to manually installed. binutils-riscv64-linux-gnu is already the newest version (2.47-2). binutils-riscv64-linux-gnu set to manually installed. libexpat1 is already the newest version (2.8.4-1). libexpat1 set to manually installed. bzip2 is already the newest version (1.0.8-6+b2). bzip2 set to manually installed. libacl1 is already the newest version (2.4.0-1). libjansson4 is already the newest version (2.15.1-1). libjansson4 set to manually installed. autotools-dev is already the newest version (20240727.1+nmu1). autotools-dev set to manually installed. coreutils is already the newest version (9.10-1). architecture-properties is already the newest version (0.2.6+b2). architecture-properties set to manually installed. libgprofng0 is already the newest version (2.47-2). libgprofng0 set to manually installed. build-essential is already the newest version (12.12). build-essential set to manually installed. libdpkg-perl is already the newest version (1.23.7). libdpkg-perl set to manually installed. base-passwd is already the newest version (3.6.8). libatomic1 is already the newest version (16.2.0-2). libatomic1 set to manually installed. libmagic1t64 is already the newest version (1:5.47-4). libmagic1t64 set to manually installed. libcc1-0 is already the newest version (16.2.0-2). libcc1-0 set to manually installed. libgfortran5 is already the newest version (16.2.0-2). libgfortran5 set to manually installed. libmd0 is already the newest version (1.2.0-2). g++ is already the newest version (4:16.1.0-3). g++ set to manually installed. libfile-stripnondeterminism-perl is already the newest version (1.15.1-1). libfile-stripnondeterminism-perl set to manually installed. bsdextrautils is already the newest version (2.42.3-1). bsdextrautils set to manually installed. libjs-sphinxdoc is already the newest version (9.1.0-7). libjs-sphinxdoc set to manually installed. g++-16 is already the newest version (16.2.0-2). g++-16 set to manually installed. libaudit1 is already the newest version (1:4.1.2-1+b2). libattr1 is already the newest version (1:2.6.0-1). gcc-riscv64-linux-gnu is already the newest version (4:16.1.0-3). gcc-riscv64-linux-gnu set to manually installed. debianutils is already the newest version (5.24). libitm1 is already the newest version (16.2.0-2). libitm1 set to manually installed. gcc-16-riscv64-linux-gnu is already the newest version (16.2.0-2). gcc-16-riscv64-linux-gnu set to manually installed. gettext-base is already the newest version (1.0-3). gettext-base set to manually installed. libgcc-s1 is already the newest version (16.2.0-2). libdb5.3t64 is already the newest version (5.3.28+dfsg2-11+b1). libctf0 is already the newest version (2.47-2). libctf0 set to manually installed. libbinutils is already the newest version (2.47-2). libbinutils set to manually installed. hostname is already the newest version (3.25). dh-python is already the newest version (7.20260623). dh-python set to manually installed. gcc-16 is already the newest version (16.2.0-2). gcc-16 set to manually installed. libffi8 is already the newest version (3.8.0-2). libffi8 set to manually installed. dh-exec is already the newest version (0.31). dh-exec set to manually installed. liblsan0 is already the newest version (16.2.0-2). liblsan0 set to manually installed. file is already the newest version (1:5.47-4). file set to manually installed. autoconf is already the newest version (2.73-2). autoconf set to manually installed. cpp-16-riscv64-linux-gnu is already the newest version (16.2.0-2). cpp-16-riscv64-linux-gnu set to manually installed. debhelper is already the newest version (14.3). debhelper set to manually installed. intltool-debian is already the newest version (0.35.0+20060710.6). intltool-debian set to manually installed. libgmp10 is already the newest version (2:6.3.0+dfsg-5+b2). dash is already the newest version (0.5.12-12). cpp-16 is already the newest version (16.2.0-2). cpp-16 set to manually installed. libboost-dev is already the newest version (1.90.0.2+nmu1). libboost-dev set to manually installed. autopoint is already the newest version (1.0-3). autopoint set to manually installed. findutils is already the newest version (4.11.0-2). base-files is already the newest version (14.2). libctf-nobfd0 is already the newest version (2.47-2). libctf-nobfd0 set to manually installed. binutils-common is already the newest version (2.47-2). binutils-common set to manually installed. binutils is already the newest version (2.47-2). binutils set to manually installed. libcrypt1 is already the newest version (1:4.5.2+20251210-1). libc-bin is already the newest version (2.43-5). gcc-16-base is already the newest version (16.2.0-2). libdebconfclient0 is already the newest version (0.283). grep is already the newest version (3.12-1). libgcc-16-dev is already the newest version (16.2.0-2). libgcc-16-dev set to manually installed. libaudit-common is already the newest version (1:4.1.2-1). dpkg is already the newest version (1.23.7). gettext is already the newest version (1.0-3). gettext set to manually installed. libgdbm-compat4t64 is already the newest version (1.26-1+b2). libgdbm-compat4t64 set to manually installed. liblzma5 is already the newest version (5.8.3-1). diffutils is already the newest version (1:3.12-1). debconf is already the newest version (1.5.92). libmagic-mgc is already the newest version (1:5.47-4). libmagic-mgc set to manually installed. perl-base is already the newest version (5.42.3-1). python3-numpy-dev is already the newest version (1:2.4.6+ds-4+b1). python3-numpy-dev set to manually installed. tar is already the newest version (1.35+dfsg-5). python3-jaraco.functools is already the newest version (4.1.0-1). python3-jaraco.functools set to manually installed. po-debconf is already the newest version (1.0.22). po-debconf set to manually installed. libsystemd0 is already the newest version (262~rc1-2). libsqlite3-0 is already the newest version (3.53.4-2). libsqlite3-0 set to manually installed. libunistring5 is already the newest version (1.4.2-1). libunistring5 set to manually installed. libudev1 is already the newest version (262~rc1-2). readline-common is already the newest version (8.3-4). readline-common set to manually installed. xz-utils is already the newest version (5.8.3-1). xz-utils set to manually installed. libtsan2 is already the newest version (16.2.0-2). libtsan2 set to manually installed. libpython3-all-dev is already the newest version (3.14.7-3). libpython3-all-dev set to manually installed. libpython3-dev is already the newest version (3.14.7-3). libpython3-dev set to manually installed. python3.14-minimal is already the newest version (3.14.7-3). python3.14-minimal set to manually installed. libzstd1 is already the newest version (1.5.7+dfsg-4). media-types is already the newest version (14.0.0). media-types set to manually installed. libpam0g is already the newest version (1.7.0-8). libtool is already the newest version (2.6.2-2). libtool set to manually installed. libxml2-16 is already the newest version (2.15.4+dfsg-1). libxml2-16 set to manually installed. netbase is already the newest version (6.6). netbase set to manually installed. python3-all-dev is already the newest version (3.14.7-3). python3-all-dev set to manually installed. python3-autocommand is already the newest version (2.2.2-4). python3-autocommand set to manually installed. python3-dev is already the newest version (3.14.7-3). python3-dev set to manually installed. openssl-provider-legacy is already the newest version (3.6.4-1). libperl5.42 is already the newest version (5.42.3-1). libperl5.42 set to manually installed. python3-typing-extensions is already the newest version (4.16.0-5). python3-typing-extensions set to manually installed. libsimde-dev is already the newest version (0.8.4~rc3-5). libsimde-dev set to manually installed. mawk is already the newest version (1.3.4.20260302-1). libpam-runtime is already the newest version (1.7.0-8). libubsan1 is already the newest version (16.2.0-2). libubsan1 set to manually installed. linux-libc-dev is already the newest version (7.1.13-1). linux-libc-dev set to manually installed. libpython3.14 is already the newest version (3.14.7-3). libpython3.14 set to manually installed. sed is already the newest version (4.9-3). zlib1g is already the newest version (1:1.3.dfsg+really1.3.2-3). python3.14-dev is already the newest version (3.14.7-3). python3.14-dev set to manually installed. libpam-modules is already the newest version (1.7.0-8). man-db is already the newest version (2.13.1-1). man-db set to manually installed. python3-more-itertools is already the newest version (11.1.0-2). python3-more-itertools set to manually installed. libpipeline1 is already the newest version (1.5.8-3). libpipeline1 set to manually installed. zlib1g-dev is already the newest version (1:1.3.dfsg+really1.3.2-3). zlib1g-dev set to manually installed. libmpfr6 is already the newest version (4.2.2-3). libmpfr6 set to manually installed. swig is already the newest version (4.5.0-3). swig set to manually installed. python3-setuptools is already the newest version (80.9.0-2). python3-setuptools set to manually installed. libstdc++-16-dev is already the newest version (16.2.0-2). libstdc++-16-dev set to manually installed. libpam-modules-bin is already the newest version (1.7.0-8). libpython3.14-minimal is already the newest version (3.14.7-3). libpython3.14-minimal set to manually installed. m4 is already the newest version (1.4.21-1). m4 set to manually installed. libsmartcols1 is already the newest version (2.42.3-1). libsframe3 is already the newest version (2.47-2). libsframe3 set to manually installed. libuuid1 is already the newest version (2.42.3-1). python3-typeguard is already the newest version (4.4.4-3). python3-typeguard set to manually installed. python3-pkg-resources is already the newest version (80.9.0-2). python3-pkg-resources set to manually installed. python3.14 is already the newest version (3.14.7-3). python3.14 set to manually installed. libncursesw6 is already the newest version (6.6+20260608-2). libncursesw6 set to manually installed. libmount1 is already the newest version (2.42.3-1). libstdc++6 is already the newest version (16.2.0-2). libstdc++6 set to manually installed. libpython3.14-dev is already the newest version (3.14.7-3). libpython3.14-dev set to manually installed. libpcre2-8-0 is already the newest version (10.48-2). perl is already the newest version (5.42.3-1). perl set to manually installed. libtinfo6 is already the newest version (6.6+20260608-2). python3-minimal is already the newest version (3.14.7-3). python3-minimal set to manually installed. util-linux is already the newest version (2.42.3-1). tzdata is already the newest version (2026c-1). tzdata set to manually installed. ncurses-base is already the newest version (6.6+20260608-2). libuchardet0 is already the newest version (0.0.8-2+b2). libuchardet0 set to manually installed. libpython3-stdlib is already the newest version (3.14.7-3). libpython3-stdlib set to manually installed. libreadline8t64 is already the newest version (8.3-4). libreadline8t64 set to manually installed. libmpc3 is already the newest version (1.3.1-3). libmpc3 set to manually installed. python3-jaraco.context is already the newest version (6.0.1-2). python3-jaraco.context set to manually installed. sysvinit-utils is already the newest version (3.18-1). python3-inflect is already the newest version (7.5.0-2). python3-inflect set to manually installed. libpython3.14-stdlib is already the newest version (3.14.7-3). libpython3.14-stdlib set to manually installed. patch is already the newest version (2.8-2). patch set to manually installed. libselinux1 is already the newest version (3.11-2). make is already the newest version (4.4.1-3). make set to manually installed. sensible-utils is already the newest version (0.0.26). sensible-utils set to manually installed. python3-jaraco.text is already the newest version (4.0.0-1). python3-jaraco.text set to manually installed. libssl3t64 is already the newest version (3.6.4-1). ncurses-bin is already the newest version (6.6+20260608-2). python3 is already the newest version (3.14.7-3). python3 set to manually installed. perl-modules-5.42 is already the newest version (5.42.3-1). perl-modules-5.42 set to manually installed. python3-zipp is already the newest version (3.23.0-1). python3-zipp set to manually installed. python3-numpy is already the newest version (1:2.4.6+ds-4+b1). python3-numpy set to manually installed. python3-all is already the newest version (3.14.7-3). python3-all set to manually installed. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg -r debootsnap-dummy' exec /srv/rebuilderd/tmp/mmdebstrap.wnnNep7dCf (Reading database ... 36078 files and directories currently installed.) Removing debootsnap-dummy (1.0) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg-query --showformat '${binary:Package}=${Version}\n' --show > "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.wnnNep7dCf I: running special hook: download /pkglist ./pkglist I: running --customize-hook in shell: sh -c 'rm "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.wnnNep7dCf I: running special hook: upload sources.list /etc/apt/sources.list I: waiting for background processes to finish... I: cleaning package lists and apt cache... I: skipping cleanup/reproducible as requested I: creating tarball... I: done I: removing tempdir /srv/rebuilderd/tmp/mmdebstrap.wnnNep7dCf... I: success in 414.6318 seconds Downloading packages 1to 100 out of 185 Downloading packages 101to 185 out of 185 env --chdir=/srv/rebuilderd/tmp/rebuilderdylDjrd/out DEB_BUILD_OPTIONS=parallel=4 LANG=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 SOURCE_DATE_EPOCH=1767942232 SBUILD_CONFIG=/srv/rebuilderd/tmp/debrebuild0iQMIh/debrebuild.sbuildrc.U5DcjgeITpKL sbuild --build=riscv64 --host=riscv64 --arch-any --no-arch-all --binNMU-changelog= consensuscore (1.1.1+dfsg-9+b2) sid; urgency=low, binary-only=yes * Binary-only non-maintainer upload for riscv64; no source changes. * Rebuild without Python 3.13 -- riscv64 Build Daemon (rv-manda-01) Fri, 09 Jan 2026 07:03:52 +0000 --chroot=/srv/rebuilderd/tmp/debrebuild0iQMIh/debrebuild.tar.ftHNbKuJ9cYv --chroot-mode=unshare --dist=unstable --no-run-lintian --no-run-piuparts --no-run-autopkgtest --no-apt-update --no-apt-upgrade --no-apt-distupgrade --no-source --verbose --nolog --bd-uninstallable-explainer= --build-path=/build/reproducible-path --dsc-dir=consensuscore-1.1.1+dfsg /srv/rebuilderd/tmp/rebuilderdylDjrd/inputs/consensuscore_1.1.1+dfsg-9.dsc I: consider moving your ~/.sbuildrc to /srv/rebuilderd/.config/sbuild/config.pl The Debian buildds switched to the "unshare" backend and sbuild will default to it in the future. To start using "unshare" add this to your `~/.config/sbuild/config.pl`: $chroot_mode = "unshare"; If you want to keep the old "schroot" mode even in the future, add the following to your `~/.config/sbuild/config.pl`: $chroot_mode = "schroot"; $schroot = "schroot"; sbuild: warning: descr(l1): found blank line where expected first heading sbuild (Debian sbuild) 0.89.3+deb13u4 (28 December 2025) on riscv64-02 +==============================================================================+ | consensuscore 1.1.1+dfsg-9+b2 (riscv64) Mon, 21 Sep 2026 00:13:09 +0000 | +==============================================================================+ Package: consensuscore Version: 1.1.1+dfsg-9+b2 Source Version: 1.1.1+dfsg-9 Distribution: unstable Machine Architecture: riscv64 Host Architecture: riscv64 Build Architecture: riscv64 Build Type: any I: No tarballs found in /srv/rebuilderd/.cache/sbuild I: Unpacking /srv/rebuilderd/tmp/debrebuild0iQMIh/debrebuild.tar.ftHNbKuJ9cYv to /srv/rebuilderd/tmp/tmp.sbuild.OPXpYWG0hD... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Fetch source files Mon, 21 Sep 2026 00:14:27 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/rebuilderd/tmp/rebuilderdylDjrd/inputs/consensuscore_1.1.1+dfsg-9.dsc exists in /srv/rebuilderd/tmp/rebuilderdylDjrd/inputs; copying to chroot sbuild: warning: descr(l1): found blank line where expected first heading +------------------------------------------------------------------------------+ | Install package build dependencies Mon, 21 Sep 2026 00:14:38 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), dh-exec, dh-sequence-python3, architecture-is-64-bit, architecture-is-little-endian, libboost-dev, libsimde-dev, python3-all-dev, python3-numpy, python3-numpy-dev, python3-setuptools, swig, build-essential Filtered Build-Depends: debhelper-compat (= 13), dh-exec, dh-sequence-python3, architecture-is-64-bit, architecture-is-little-endian, libboost-dev, libsimde-dev, python3-all-dev, python3-numpy, python3-numpy-dev, python3-setuptools, swig, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-tnMXnu/apt_archive/sbuild-build-depends-main-dummy.deb'. Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies +------------------------------------------------------------------------------+ | Check architectures Mon, 21 Sep 2026 00:15:04 +0000 | +------------------------------------------------------------------------------+ Arch check ok (riscv64 included in any) +------------------------------------------------------------------------------+ | Build environment Mon, 21 Sep 2026 00:15:06 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.107+deb13-riscv64 #1 SMP Debian 6.12.107-1 (2026-08-29) riscv64 (riscv64) Toolchain package versions: binutils_2.47-2 dpkg-dev_1.23.7 g++-16_16.2.0-2 gcc-16_16.2.0-2 libc6-dev_2.43-5 libstdc++-16-dev_16.2.0-2 libstdc++6_16.2.0-2 linux-libc-dev_7.1.13-1 Package versions: architecture-properties_0.2.6+b2 autoconf_2.73-2 automake_1:1.18.1-4 autopoint_1.0-3 autotools-dev_20240727.1+nmu1 base-files_14.2 base-passwd_3.6.8 bash_5.3-4 binutils_2.47-2 binutils-common_2.47-2 binutils-riscv64-linux-gnu_2.47-2 bsdextrautils_2.42.3-1 build-essential_12.12 bzip2_1.0.8-6+b2 coreutils_9.10-1 cpp_4:16.1.0-3 cpp-16_16.2.0-2 cpp-16-riscv64-linux-gnu_16.2.0-2 cpp-riscv64-linux-gnu_4:16.1.0-3 dash_0.5.12-12 debconf_1.5.92 debhelper_14.3 debianutils_5.24 dh-autoreconf_22 dh-exec_0.31 dh-python_7.20260623 dh-strip-nondeterminism_1.15.1-1 diffutils_1:3.12-1 dpkg_1.23.7 dpkg-dev_1.23.7 dwz_0.17-1 file_1:5.47-4 findutils_4.11.0-2 g++_4:16.1.0-3 g++-16_16.2.0-2 g++-16-riscv64-linux-gnu_16.2.0-2 g++-riscv64-linux-gnu_4:16.1.0-3 gcc_4:16.1.0-3 gcc-16_16.2.0-2 gcc-16-base_16.2.0-2 gcc-16-riscv64-linux-gnu_16.2.0-2 gcc-riscv64-linux-gnu_4:16.1.0-3 gettext_1.0-3 gettext-base_1.0-3 grep_3.12-1 groff-base_1.24.1-1 gzip_1.14-1 hostname_3.25 init-system-helpers_1.69+nmu1 intltool-debian_0.35.0+20060710.6 libacl1_2.4.0-1 libarchive-zip-perl_1.68-1 libasan8_16.2.0-2 libatomic1_16.2.0-2 libattr1_1:2.6.0-1 libaudit-common_1:4.1.2-1 libaudit1_1:4.1.2-1+b2 libbinutils_2.47-2 libblas3_3.12.1-8 libblkid1_2.42.3-1 libboost-dev_1.90.0.2+nmu1 libboost1.90-dev_1.90.0-6.1+b1 libbz2-1.0_1.0.8-6+b2 libc-bin_2.43-5 libc-dev-bin_2.43-5 libc-gconv-modules-extra_2.43-5 libc6_2.43-5 libc6-dev_2.43-5 libcap-ng0_0.9.5-2 libcc1-0_16.2.0-2 libcrypt1_1:4.5.2+20251210-1 libctf-nobfd0_2.47-2 libctf0_2.47-2 libdb5.3t64_5.3.28+dfsg2-11+b1 libdebconfclient0_0.283 libdebhelper-perl_14.3 libdpkg-perl_1.23.7 libelf1t64_0.196-1 libexpat1_2.8.4-1 libexpat1-dev_2.8.4-1 libffi8_3.8.0-2 libfile-stripnondeterminism-perl_1.15.1-1 libgcc-16-dev_16.2.0-2 libgcc-s1_16.2.0-2 libgdbm-compat4t64_1.26-1+b2 libgdbm6t64_1.26-1+b2 libgfortran5_16.2.0-2 libgmp10_2:6.3.0+dfsg-5+b2 libgomp1_16.2.0-2 libgprofng0_2.47-2 libisl23_0.28-1 libitm1_16.2.0-2 libjansson4_2.15.1-1 libjs-sphinxdoc_9.1.0-7 liblapack3_3.12.1-8 liblsan0_16.2.0-2 liblzma5_5.8.3-1 libmagic-mgc_1:5.47-4 libmagic1t64_1:5.47-4 libmd0_1.2.0-2 libmount1_2.42.3-1 libmpc3_1.3.1-3 libmpfr6_4.2.2-3 libncursesw6_6.6+20260608-2 libpam-modules_1.7.0-8 libpam-modules-bin_1.7.0-8 libpam-runtime_1.7.0-8 libpam0g_1.7.0-8 libpcre2-8-0_10.48-2 libperl5.42_5.42.3-1 libpipeline1_1.5.8-3 libpython3-all-dev_3.14.7-3 libpython3-dev_3.14.7-3 libpython3-stdlib_3.14.7-3 libpython3.14_3.14.7-3 libpython3.14-dev_3.14.7-3 libpython3.14-minimal_3.14.7-3 libpython3.14-stdlib_3.14.7-3 libreadline8t64_8.3-4 libselinux1_3.11-2 libsframe3_2.47-2 libsimde-dev_0.8.4~rc3-5 libsmartcols1_2.42.3-1 libsqlite3-0_3.53.4-2 libssl3t64_3.6.4-1 libstdc++-16-dev_16.2.0-2 libstdc++6_16.2.0-2 libsystemd0_262~rc1-2 libtinfo6_6.6+20260608-2 libtool_2.6.2-2 libtsan2_16.2.0-2 libubsan1_16.2.0-2 libuchardet0_0.0.8-2+b2 libudev1_262~rc1-2 libunistring5_1.4.2-1 libuuid1_2.42.3-1 libxml2-16_2.15.4+dfsg-1 libzstd1_1.5.7+dfsg-4 linux-libc-dev_7.1.13-1 m4_1.4.21-1 make_4.4.1-3 man-db_2.13.1-1 mawk_1.3.4.20260302-1 media-types_14.0.0 ncurses-base_6.6+20260608-2 ncurses-bin_6.6+20260608-2 netbase_6.6 openssl-provider-legacy_3.6.4-1 patch_2.8-2 perl_5.42.3-1 perl-base_5.42.3-1 perl-modules-5.42_5.42.3-1 po-debconf_1.0.22 python3_3.14.7-3 python3-all_3.14.7-3 python3-all-dev_3.14.7-3 python3-autocommand_2.2.2-4 python3-dev_3.14.7-3 python3-inflect_7.5.0-2 python3-jaraco.context_6.0.1-2 python3-jaraco.functools_4.1.0-1 python3-jaraco.text_4.0.0-1 python3-minimal_3.14.7-3 python3-more-itertools_11.1.0-2 python3-numpy_1:2.4.6+ds-4+b1 python3-numpy-dev_1:2.4.6+ds-4+b1 python3-pkg-resources_80.9.0-2 python3-setuptools_80.9.0-2 python3-typeguard_4.4.4-3 python3-typing-extensions_4.16.0-5 python3-zipp_3.23.0-1 python3.14_3.14.7-3 python3.14-dev_3.14.7-3 python3.14-minimal_3.14.7-3 readline-common_8.3-4 sed_4.9-3 sensible-utils_0.0.26 swig_4.5.0-3 sysvinit-utils_3.18-1 tar_1.35+dfsg-5 tzdata_2026c-1 util-linux_2.42.3-1 xz-utils_5.8.3-1 zlib1g_1:1.3.dfsg+really1.3.2-3 zlib1g-dev_1:1.3.dfsg+really1.3.2-3 +------------------------------------------------------------------------------+ | Build Mon, 21 Sep 2026 00:15:06 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: consensuscore Binary: libconsensuscore-dev, python3-pbconsensuscore Architecture: any Version: 1.1.1+dfsg-9 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Homepage: https://github.com/PacificBiosciences/ConsensusCore Standards-Version: 4.7.3 Vcs-Browser: https://salsa.debian.org/med-team/consensuscore Vcs-Git: https://salsa.debian.org/med-team/consensuscore.git Testsuite: autopkgtest-pkg-python Build-Depends: debhelper-compat (= 13), dh-exec, dh-sequence-python3, architecture-is-64-bit [!i386], architecture-is-little-endian, libboost-dev, libsimde-dev, python3-all-dev, python3-numpy, python3-numpy-dev, python3-setuptools, swig Package-List: libconsensuscore-dev deb libdevel optional arch=any python3-pbconsensuscore deb python optional arch=any Checksums-Sha1: 06118ce273ef10180336ab071fd86dc60aea7168 363936 consensuscore_1.1.1+dfsg.orig.tar.xz ac12995d4ce310fb671f720f1229e09aef7f26c2 10340 consensuscore_1.1.1+dfsg-9.debian.tar.xz Checksums-Sha256: 47865e3769e2d6647003f70ffce68f8a5b2f69a6ae04ff27d106b3ec84660d82 363936 consensuscore_1.1.1+dfsg.orig.tar.xz 4db0ae878e268792a962af9d1bc855fe16811c67404673045a7ef2dabe5f458e 10340 consensuscore_1.1.1+dfsg-9.debian.tar.xz Files: 17991299008d1c01e25ce3984b7fe7bd 363936 consensuscore_1.1.1+dfsg.orig.tar.xz 949772e680d176bd186c5326388ebdcf 10340 consensuscore_1.1.1+dfsg-9.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEEj23hBDd/OxHnQXSHMfMURUShdBoFAmlgqxwRHHRjaGV0QGRl Ymlhbi5vcmcACgkQMfMURUShdBp7ZhAAvUnjkG3krPpq/gREqdP+b35fjw3OJN8w e0Y94gfMgaqrEBcSAtHOKjMkJQ5GchDLdu88C6OAO2OyIV58rDXaWHYq8YU5RmVK 57GZKb/B4viGxZXtcwyMPz4abCD92wk0FFvQR0h+uFpcAttSM3PF2zdzghFWyu0G DFsphVof8qwd9IhUr48XwAvcMj1RMW5PkJl/6WNblKsMtc82cgpCf6GkZkVhZmQJ 1WeqZHyGl6BQrr3O1dZ0DFBXOpvyaEyZ+I/FbYEgXJu9B0SrKMRBoXhkSUxv4DJk 1Cyh2VwJMIpFwydbaWWHuCCo7iub7D4Oqh4PN7CBdfdoHa2hh7WRIGPdjQqr3MQz 5NZTm1Hmc2iRYHw6pyAgtJz44s27u2GYPMUWOQhHzj1vJsKK5AmGlfVNgq5EjG9b lR0Aef/hgCJGJHk9I2pE36DvnBaCXf4C1wW2Yk6GzTVsB0wZjI/r/qeYEZI8EWGu MIxfTmvoLjQAxp2ZLNoTgm16zPPDkRtk1V+OCRrjkvQFzK7QFfam03TSmf4/vp/B w2ePIh1elkHuy6XEEQzeVLFzcb7x+bceLu+tnp6GOJizQsMMV97A0gBtxd9qio05 wAi85Ot7AxA3xloDHrDM4GqhM+3+aeV2UD+WFwWdG8r92Pe6p0E5LO2h5IXqsogy noTyYyFm1uc= =ecdP -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./consensuscore_1.1.1+dfsg-9.dsc: missing OpenPGP keyrings dpkg-source: info: verifying ./consensuscore_1.1.1+dfsg-9.dsc dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-keyring.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-tag2upload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-nonupload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-maintainers.pgp dpkg-source: info: extracting consensuscore in /build/reproducible-path/consensuscore-1.1.1+dfsg dpkg-source: info: unpacking consensuscore_1.1.1+dfsg.orig.tar.xz dpkg-source: info: unpacking consensuscore_1.1.1+dfsg-9.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying spelling.patch dpkg-source: info: applying compiler-flags.patch dpkg-source: info: applying gcc-6.patch dpkg-source: info: applying 2to3.patch dpkg-source: info: applying check_boost_version.patch dpkg-source: info: applying sequence_setuptools.patch dpkg-source: info: applying portable_simd.patch Check disk space ---------------- Sufficient free space for build Hack binNMU version ------------------- Created changelog entry for binNMU version 1.1.1+dfsg-9+b2 User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh SOURCE_DATE_EPOCH=1767942232 USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -B dpkg-buildpackage: info: source package consensuscore dpkg-buildpackage: info: source version 1.1.1+dfsg-9+b2 dpkg-buildpackage: info: source distribution sid dpkg-buildpackage: info: source changed by riscv64 Build Daemon (rv-manda-01) dpkg-source --before-build . dpkg-buildpackage: info: host architecture riscv64 debian/rules clean dh clean --buildsystem=pybuild debian/rules execute_before_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' ! test -f src/SWIG/numpy.i.orig || mv -v src/SWIG/numpy.i.orig src/SWIG/numpy.i make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_auto_clean -O--buildsystem=pybuild I: pybuild base:385: python3.14 setup.py clean WARNING: '' not a valid package name; please use only .-separated package names in setup.py running clean removing '/build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build' (and everything under it) 'build/bdist.linux-riscv64' does not exist -- can't clean it 'build/scripts-3.14' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary-arch dh binary-arch --buildsystem=pybuild dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild dh_auto_configure -a -O--buildsystem=pybuild I: pybuild base:385: python3.14 setup.py config WARNING: '' not a valid package name; please use only .-separated package names in setup.py running config debian/rules execute_before_dh_auto_build make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' test -f src/SWIG/numpy.i.orig || mv -v src/SWIG/numpy.i src/SWIG/numpy.i.orig renamed 'src/SWIG/numpy.i' -> 'src/SWIG/numpy.i.orig' cp /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/numpy.i src/SWIG/numpy.i make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_auto_build -a -O--buildsystem=pybuild I: pybuild base:385: /usr/bin/python3 setup.py build WARNING: '' not a valid package name; please use only .-separated package names in setup.py running build ConsensusCore configuration summary ----------------------------------- BOOST = /usr/include/ SWIG = /usr/bin/swig SWIG_LIB = /usr/share/swig/4.5.0 PYTHON_INCLUDE = /usr/include/python3.14 NUMPY_INCLUDE = /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include DEBUG = CPP_STD = c++14 make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Cpp.mk -j8 make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Matrix/SparseMatrix.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SparseMatrix.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Matrix/DenseMatrix.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/DenseMatrix.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Mutation.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Mutation.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Feature.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Feature.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Checksum.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Checksum.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Read.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Read.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/QuiverConsensus.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConsensus.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/Diploid.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Diploid.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SparseMatrix.o -MM src/C++/Matrix/SparseMatrix.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SparseMatrix.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Feature.o -MM src/C++/Feature.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Feature.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/ReadScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/ReadScorer.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/DenseMatrix.o -MM src/C++/Matrix/DenseMatrix.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/DenseMatrix.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Diploid.o -MM src/C++/Quiver/Diploid.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Diploid.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/detail/RecursorBase.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RecursorBase.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/MutationEnumerator.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationEnumerator.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/SseRecursor.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SseRecursor.o src/C++/Quiver/detail/RecursorBase.cpp: In instantiation of ‘const ConsensusCore::PairwiseAlignment* ConsensusCore::detail::RecursorBase::Alignment(const E&, const M&) const [with M = ConsensusCore::DenseMatrix; E = ConsensusCore::QvEvaluator; C = ConsensusCore::detail::ViterbiCombiner]’: src/C++/Quiver/detail/RecursorBase.cpp:221:16: required from here 221 | template class RecursorBase; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp:94:11: warning: variable ‘pathScore’ set but not used [-Wunused-but-set-variable=] 94 | float pathScore = 0; | ^~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp: In instantiation of ‘const ConsensusCore::PairwiseAlignment* ConsensusCore::detail::RecursorBase::Alignment(const E&, const M&) const [with M = ConsensusCore::SparseMatrix; E = ConsensusCore::QvEvaluator; C = ConsensusCore::detail::ViterbiCombiner]’: src/C++/Quiver/detail/RecursorBase.cpp:222:16: required from here 222 | template class RecursorBase; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp:94:11: warning: variable ‘pathScore’ set but not used [-Wunused-but-set-variable=] 94 | float pathScore = 0; | ^~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp: In instantiation of ‘const ConsensusCore::PairwiseAlignment* ConsensusCore::detail::RecursorBase::Alignment(const E&, const M&) const [with M = ConsensusCore::SparseMatrix; E = ConsensusCore::QvEvaluator; C = ConsensusCore::detail::SumProductCombiner]’: src/C++/Quiver/detail/RecursorBase.cpp:223:16: required from here 223 | template class RecursorBase; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp:94:11: warning: variable ‘pathScore’ set but not used [-Wunused-but-set-variable=] 94 | float pathScore = 0; | ^~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp: In instantiation of ‘const ConsensusCore::PairwiseAlignment* ConsensusCore::detail::RecursorBase::Alignment(const E&, const M&) const [with M = ConsensusCore::SparseMatrix; E = ConsensusCore::EdnaEvaluator; C = ConsensusCore::detail::SumProductCombiner]’: src/C++/Quiver/detail/RecursorBase.cpp:224:16: required from here 224 | template class RecursorBase; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp:94:11: warning: variable ‘pathScore’ set but not used [-Wunused-but-set-variable=] 94 | float pathScore = 0; | ^~~~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationEnumerator.o -MM src/C++/Quiver/MutationEnumerator.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationEnumerator.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/MutationScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationScorer.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Read.o -MM src/C++/Read.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Read.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/ReadScorer.o -MM src/C++/Quiver/ReadScorer.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/ReadScorer.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/QuiverConfig.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConfig.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/SimpleRecursor.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SimpleRecursor.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Checksum.o -MM src/C++/Checksum.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Checksum.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/MultiReadMutationScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MultiReadMutationScorer.o src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SimpleRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:190:16: required from here 190 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SseRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:191:16: required from here 191 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SimpleRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:192:16: required from here 192 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SimpleRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:193:16: required from here 193 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SseRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:194:16: required from here 194 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SseRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:195:16: required from here 195 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SseRecursor; EvaluatorType = ConsensusCore::EdnaEvaluator]’: src/C++/Quiver/MutationScorer.cpp:196:16: required from here 196 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConfig.o -MM src/C++/Quiver/QuiverConfig.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConfig.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Utils.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Utils.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Mutation.o -MM src/C++/Mutation.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Mutation.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Align/PairwiseAlignment.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PairwiseAlignment.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RecursorBase.o -MM src/C++/Quiver/detail/RecursorBase.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RecursorBase.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Utils.o -MM src/C++/Utils.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Utils.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Align/LinearAlignment.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/LinearAlignment.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Align/AffineAlignment.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AffineAlignment.o src/C++/Align/PairwiseAlignment.cpp: In function ‘std::vector ConsensusCore::TargetToQueryPositions(const std::string&)’: src/C++/Align/PairwiseAlignment.cpp:198:9: warning: variable ‘targetPos’ set but not used [-Wunused-but-set-variable=] 198 | int targetPos = 0; | ^~~~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConsensus.o -MM src/C++/Quiver/QuiverConsensus.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConsensus.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Align/AlignConfig.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AlignConfig.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AlignConfig.o -MM src/C++/Align/AlignConfig.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AlignConfig.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Features.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Features.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PairwiseAlignment.o -MM src/C++/Align/PairwiseAlignment.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PairwiseAlignment.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/LinearAlignment.o -MM src/C++/Align/LinearAlignment.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/LinearAlignment.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Sequence.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Sequence.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Edna/EdnaCounts.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/EdnaCounts.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Sequence.o -MM src/C++/Sequence.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Sequence.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Version.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Version.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AffineAlignment.o -MM src/C++/Align/AffineAlignment.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AffineAlignment.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Coverage.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Coverage.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Features.o -MM src/C++/Features.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Features.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Coverage.o -MM src/C++/Coverage.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Coverage.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Poa/PoaGraphTraversals.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphTraversals.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Poa/PoaGraph.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraph.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationScorer.o -MM src/C++/Quiver/MutationScorer.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationScorer.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Poa/PoaConsensus.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaConsensus.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/EdnaCounts.o -MM src/C++/Edna/EdnaCounts.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/EdnaCounts.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Poa/PoaGraphImpl.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphImpl.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaConsensus.o -MM src/C++/Poa/PoaConsensus.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaConsensus.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Version.o -MM src/C++/Version.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Version.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Poa/RangeFinder.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RangeFinder.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Logging/Logging.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Logging.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraph.o -MM src/C++/Poa/PoaGraph.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraph.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Statistics/Binomial.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Binomial.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Logging.o -MM src/C++/Logging/Logging.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Logging.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MultiReadMutationScorer.o -MM src/C++/Quiver/MultiReadMutationScorer.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MultiReadMutationScorer.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RangeFinder.o -MM src/C++/Poa/RangeFinder.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RangeFinder.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SimpleRecursor.o -MM src/C++/Quiver/SimpleRecursor.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SimpleRecursor.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphTraversals.o -MM src/C++/Poa/PoaGraphTraversals.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphTraversals.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Binomial.o -MM src/C++/Statistics/Binomial.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Binomial.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphImpl.o -MM src/C++/Poa/PoaGraphImpl.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphImpl.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SseRecursor.o -MM src/C++/Quiver/SseRecursor.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SseRecursor.d ar crs /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SparseMatrix.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/DenseMatrix.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Mutation.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Feature.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Checksum.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Read.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConsensus.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Diploid.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/ReadScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RecursorBase.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationEnumerator.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SseRecursor.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConfig.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SimpleRecursor.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MultiReadMutationScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Utils.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PairwiseAlignment.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/LinearAlignment.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AffineAlignment.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AlignConfig.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Features.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Sequence.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/EdnaCounts.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Version.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Coverage.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphTraversals.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraph.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaConsensus.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphImpl.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RangeFinder.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Logging.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Binomial.o touch /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Python.mk make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python SWIG_LIB=/usr/share/swig/4.5.0 /usr/bin/swig -Wall -c++ -python -builtin -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -module ConsensusCore -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx src/SWIG/ConsensusCore.i /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Feature.hpp:20: Warning 309: private inheritance from base 'boost::shared_array< T >' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:28: Warning 309: private inheritance from base 'boost_dense_matrix' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Poa/PoaConsensus.hpp:24: Warning 309: private inheritance from base 'noncopyable' (ignored). g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -pthread -shared -Wl,-O1 -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I /usr/include/python3.14 -I /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/_ConsensusCore.so make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' /usr/bin/make test make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' /usr/bin/make -f make/Cpp.mk -j8 make[3]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[3]: '/build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a' is up to date. make[3]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[3]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestPoaConsensus.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestPoaConsensus.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestDiploidQuiver.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestDiploidQuiver.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestCoverage.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestCoverage.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMutationEnumerator.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutationEnumerator.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMultiReadMutationScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMultiReadMutationScorer.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestQvEvaluator.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestQvEvaluator.o In file included from /usr/include/boost/bind.hpp:30, from /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestQvEvaluator.cpp:5: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestRecursors.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestRecursors.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMutations.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutations.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestPairwiseAlignment.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestPairwiseAlignment.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMutationScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutationScorer.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestSparseVector.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestSparseVector.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/ParameterSettings.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/ParameterSettings.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMatrixFacades.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMatrixFacades.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestPoaConsensus.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestDiploidQuiver.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestCoverage.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutationEnumerator.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMultiReadMutationScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestQvEvaluator.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestRecursors.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutations.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestPairwiseAlignment.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutationScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestSparseVector.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/ParameterSettings.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMatrixFacades.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 /build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0/gmock-gtest-all.cc /build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0/gmock_main.cc -lpthread -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/test-runner GTEST_OUTPUT="xml:tests-summary.xml" /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/test-runner Running main() from gmock_main.cc [==========] Running 158 tests from 29 test cases. [----------] Global test environment set-up. [----------] 4 tests from PoaGraph [ RUN ] PoaGraph.SmallBasicTest [ OK ] PoaGraph.SmallBasicTest (1 ms) [ RUN ] PoaGraph.SmallExtraTests [ OK ] PoaGraph.SmallExtraTests (2 ms) [ RUN ] PoaGraph.SmallMismatchTests [ OK ] PoaGraph.SmallMismatchTests (2 ms) [ RUN ] PoaGraph.SmallDeletionTests [ OK ] PoaGraph.SmallDeletionTests (2 ms) [----------] 4 tests from PoaGraph (7 ms total) [----------] 8 tests from PoaConsensus [ RUN ] PoaConsensus.TestSimple [ OK ] PoaConsensus.TestSimple (2 ms) [ RUN ] PoaConsensus.TestOverhangSecond [ OK ] PoaConsensus.TestOverhangSecond (0 ms) [ RUN ] PoaConsensus.SmallSemiglobalTest [ OK ] PoaConsensus.SmallSemiglobalTest (1 ms) [ RUN ] PoaConsensus.SmallTilingTest [ OK ] PoaConsensus.SmallTilingTest (1 ms) [ RUN ] PoaConsensus.TestVerboseGraphVizOutput [ OK ] PoaConsensus.TestVerboseGraphVizOutput (1 ms) [ RUN ] PoaConsensus.TestLocalStaggered dot -Tpng local-staggered.dot > local-staggered.png sh: 1: dot: not found [ OK ] PoaConsensus.TestLocalStaggered (23 ms) [ RUN ] PoaConsensus.TestLongInsert [ OK ] PoaConsensus.TestLongInsert (5 ms) [ RUN ] PoaConsensus.NondeterminismRegressionTest [ OK ] PoaConsensus.NondeterminismRegressionTest (5416 ms) [----------] 8 tests from PoaConsensus (5449 ms total) [----------] 3 tests from CoverageTests [ RUN ] CoverageTests.CoverageInWindowTest [ OK ] CoverageTests.CoverageInWindowTest (0 ms) [ RUN ] CoverageTests.CoveredIntervalsTest [ OK ] CoverageTests.CoveredIntervalsTest (1 ms) [ RUN ] CoverageTests.CoveredIntervalsTest2 [ OK ] CoverageTests.CoveredIntervalsTest2 (0 ms) [----------] 3 tests from CoverageTests (2 ms total) [----------] 4 tests from MutationEnumerationTest [ RUN ] MutationEnumerationTest.TestAllMutations [ OK ] MutationEnumerationTest.TestAllMutations (0 ms) [ RUN ] MutationEnumerationTest.TestUniqueMutations [ OK ] MutationEnumerationTest.TestUniqueMutations (0 ms) [ RUN ] MutationEnumerationTest.TestUniqueNearbyMutations [ OK ] MutationEnumerationTest.TestUniqueNearbyMutations (14 ms) [ RUN ] MutationEnumerationTest.TestDinucleotideMutations [ OK ] MutationEnumerationTest.TestDinucleotideMutations (0 ms) [----------] 4 tests from MutationEnumerationTest (14 ms total) [----------] 1 test from QuiverConfigTableTests [ RUN ] QuiverConfigTableTests.IllegalChemistry [ OK ] QuiverConfigTableTests.IllegalChemistry (1 ms) [----------] 1 test from QuiverConfigTableTests (1 ms total) [----------] 3 tests from MutationOrientationTests [ RUN ] MutationOrientationTests.ReadScoresMutation1 [ OK ] MutationOrientationTests.ReadScoresMutation1 (0 ms) [ RUN ] MutationOrientationTests.ReadScoresMutation2 [ OK ] MutationOrientationTests.ReadScoresMutation2 (0 ms) [ RUN ] MutationOrientationTests.OrientedMutation [ OK ] MutationOrientationTests.OrientedMutation (1 ms) [----------] 3 tests from MutationOrientationTests (1 ms total) [----------] 11 tests from MultiReadMutationScorerTest/0, where TypeParam = ConsensusCore::SseRecursor [ RUN ] MultiReadMutationScorerTest/0.Template [ OK ] MultiReadMutationScorerTest/0.Template (0 ms) [ RUN ] MultiReadMutationScorerTest/0.BasicTest [ OK ] MultiReadMutationScorerTest/0.BasicTest (6 ms) [ RUN ] MultiReadMutationScorerTest/0.ManyMutationTest [ OK ] MultiReadMutationScorerTest/0.ManyMutationTest (10 ms) [ RUN ] MultiReadMutationScorerTest/0.CopyConstructorTest [ OK ] MultiReadMutationScorerTest/0.CopyConstructorTest (2 ms) [ RUN ] MultiReadMutationScorerTest/0.ReverseStrandTest [ OK ] MultiReadMutationScorerTest/0.ReverseStrandTest (5 ms) [ RUN ] MultiReadMutationScorerTest/0.TestMutationsAtBeginning [ OK ] MultiReadMutationScorerTest/0.TestMutationsAtBeginning (1 ms) [ RUN ] MultiReadMutationScorerTest/0.TestMutationsAtEnd [ OK ] MultiReadMutationScorerTest/0.TestMutationsAtEnd (2 ms) [ RUN ] MultiReadMutationScorerTest/0.NonSpanningReadsTest1 [ OK ] MultiReadMutationScorerTest/0.NonSpanningReadsTest1 (5 ms) [ RUN ] MultiReadMutationScorerTest/0.CopyTest [ OK ] MultiReadMutationScorerTest/0.CopyTest (2 ms) [ RUN ] MultiReadMutationScorerTest/0.MultiBaseSubstitutionsAtBounds [ OK ] MultiReadMutationScorerTest/0.MultiBaseSubstitutionsAtBounds (2 ms) [ RUN ] MultiReadMutationScorerTest/0.MultiBaseIndelsAtBounds [ OK ] MultiReadMutationScorerTest/0.MultiBaseIndelsAtBounds (3 ms) [----------] 11 tests from MultiReadMutationScorerTest/0 (38 ms total) [----------] 5 tests from QvEvaluatorTest [ RUN ] QvEvaluatorTest.IncVsInc4 [ OK ] QvEvaluatorTest.IncVsInc4 (576 ms) [ RUN ] QvEvaluatorTest.DelVsDel4 [ OK ] QvEvaluatorTest.DelVsDel4 (519 ms) [ RUN ] QvEvaluatorTest.ExtraVsExtra4 [ OK ] QvEvaluatorTest.ExtraVsExtra4 (690 ms) [ RUN ] QvEvaluatorTest.MergeVsMerge4 [ OK ] QvEvaluatorTest.MergeVsMerge4 (477 ms) [ RUN ] QvEvaluatorTest.BadTagTest [ OK ] QvEvaluatorTest.BadTagTest (32 ms) [----------] 5 tests from QvEvaluatorTest (2296 ms total) [----------] 7 tests from RecursorTest/0, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] RecursorTest/0.SmallMatchTest [ OK ] RecursorTest/0.SmallMatchTest (0 ms) [ RUN ] RecursorTest/0.SmallMismatchTest [ OK ] RecursorTest/0.SmallMismatchTest (0 ms) [ RUN ] RecursorTest/0.SmallMergeTest [ OK ] RecursorTest/0.SmallMergeTest (0 ms) [ RUN ] RecursorTest/0.MediumSizedTest [ OK ] RecursorTest/0.MediumSizedTest (4 ms) [ RUN ] RecursorTest/0.LinkTest [ OK ] RecursorTest/0.LinkTest (0 ms) [ RUN ] RecursorTest/0.ExtendAlphaTest [ OK ] RecursorTest/0.ExtendAlphaTest (1 ms) [ RUN ] RecursorTest/0.ExtendBetaTest [ OK ] RecursorTest/0.ExtendBetaTest (0 ms) [----------] 7 tests from RecursorTest/0 (6 ms total) [----------] 7 tests from RecursorTest/1, where TypeParam = ConsensusCore::SseRecursor [ RUN ] RecursorTest/1.SmallMatchTest [ OK ] RecursorTest/1.SmallMatchTest (0 ms) [ RUN ] RecursorTest/1.SmallMismatchTest [ OK ] RecursorTest/1.SmallMismatchTest (0 ms) [ RUN ] RecursorTest/1.SmallMergeTest [ OK ] RecursorTest/1.SmallMergeTest (0 ms) [ RUN ] RecursorTest/1.MediumSizedTest [ OK ] RecursorTest/1.MediumSizedTest (25 ms) [ RUN ] RecursorTest/1.LinkTest [ OK ] RecursorTest/1.LinkTest (1 ms) [ RUN ] RecursorTest/1.ExtendAlphaTest [ OK ] RecursorTest/1.ExtendAlphaTest (0 ms) [ RUN ] RecursorTest/1.ExtendBetaTest [ OK ] RecursorTest/1.ExtendBetaTest (1 ms) [----------] 7 tests from RecursorTest/1 (28 ms total) [----------] 7 tests from RecursorTest/2, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] RecursorTest/2.SmallMatchTest [ OK ] RecursorTest/2.SmallMatchTest (0 ms) [ RUN ] RecursorTest/2.SmallMismatchTest [ OK ] RecursorTest/2.SmallMismatchTest (0 ms) [ RUN ] RecursorTest/2.SmallMergeTest [ OK ] RecursorTest/2.SmallMergeTest (0 ms) [ RUN ] RecursorTest/2.MediumSizedTest [ OK ] RecursorTest/2.MediumSizedTest (28 ms) [ RUN ] RecursorTest/2.LinkTest [ OK ] RecursorTest/2.LinkTest (0 ms) [ RUN ] RecursorTest/2.ExtendAlphaTest [ OK ] RecursorTest/2.ExtendAlphaTest (1 ms) [ RUN ] RecursorTest/2.ExtendBetaTest [ OK ] RecursorTest/2.ExtendBetaTest (1 ms) [----------] 7 tests from RecursorTest/2 (31 ms total) [----------] 7 tests from RecursorTest/3, where TypeParam = ConsensusCore::SseRecursor [ RUN ] RecursorTest/3.SmallMatchTest [ OK ] RecursorTest/3.SmallMatchTest (0 ms) [ RUN ] RecursorTest/3.SmallMismatchTest [ OK ] RecursorTest/3.SmallMismatchTest (0 ms) [ RUN ] RecursorTest/3.SmallMergeTest [ OK ] RecursorTest/3.SmallMergeTest (0 ms) [ RUN ] RecursorTest/3.MediumSizedTest [ OK ] RecursorTest/3.MediumSizedTest (26 ms) [ RUN ] RecursorTest/3.LinkTest [ OK ] RecursorTest/3.LinkTest (1 ms) [ RUN ] RecursorTest/3.ExtendAlphaTest [ OK ] RecursorTest/3.ExtendAlphaTest (1 ms) [ RUN ] RecursorTest/3.ExtendBetaTest [ OK ] RecursorTest/3.ExtendBetaTest (0 ms) [----------] 7 tests from RecursorTest/3 (28 ms total) [----------] 5 tests from RecursorFuzzTest/0, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] RecursorFuzzTest/0.AlphaBetaConcordance [ OK ] RecursorFuzzTest/0.AlphaBetaConcordance (94 ms) [ RUN ] RecursorFuzzTest/0.Alignment [ OK ] RecursorFuzzTest/0.Alignment (103 ms) [ RUN ] RecursorFuzzTest/0.LinkAlphaBeta [ OK ] RecursorFuzzTest/0.LinkAlphaBeta (103 ms) [ RUN ] RecursorFuzzTest/0.ExtendAlpha [ OK ] RecursorFuzzTest/0.ExtendAlpha (194 ms) [ RUN ] RecursorFuzzTest/0.ExtendBeta [ OK ] RecursorFuzzTest/0.ExtendBeta (202 ms) [----------] 5 tests from RecursorFuzzTest/0 (696 ms total) [----------] 5 tests from RecursorFuzzTest/1, where TypeParam = ConsensusCore::SseRecursor [ RUN ] RecursorFuzzTest/1.AlphaBetaConcordance [ OK ] RecursorFuzzTest/1.AlphaBetaConcordance (532 ms) [ RUN ] RecursorFuzzTest/1.Alignment [ OK ] RecursorFuzzTest/1.Alignment (538 ms) [ RUN ] RecursorFuzzTest/1.LinkAlphaBeta [ OK ] RecursorFuzzTest/1.LinkAlphaBeta (556 ms) [ RUN ] RecursorFuzzTest/1.ExtendAlpha [ OK ] RecursorFuzzTest/1.ExtendAlpha (212 ms) [ RUN ] RecursorFuzzTest/1.ExtendBeta [ OK ] RecursorFuzzTest/1.ExtendBeta (211 ms) [----------] 5 tests from RecursorFuzzTest/1 (2051 ms total) [----------] 5 tests from RecursorFuzzTest/2, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] RecursorFuzzTest/2.AlphaBetaConcordance [ OK ] RecursorFuzzTest/2.AlphaBetaConcordance (534 ms) [ RUN ] RecursorFuzzTest/2.Alignment [ OK ] RecursorFuzzTest/2.Alignment (524 ms) [ RUN ] RecursorFuzzTest/2.LinkAlphaBeta [ OK ] RecursorFuzzTest/2.LinkAlphaBeta (669 ms) [ RUN ] RecursorFuzzTest/2.ExtendAlpha [ OK ] RecursorFuzzTest/2.ExtendAlpha (171 ms) [ RUN ] RecursorFuzzTest/2.ExtendBeta [ OK ] RecursorFuzzTest/2.ExtendBeta (176 ms) [----------] 5 tests from RecursorFuzzTest/2 (2075 ms total) [----------] 5 tests from RecursorFuzzTest/3, where TypeParam = ConsensusCore::SseRecursor [ RUN ] RecursorFuzzTest/3.AlphaBetaConcordance [ OK ] RecursorFuzzTest/3.AlphaBetaConcordance (621 ms) [ RUN ] RecursorFuzzTest/3.Alignment [ OK ] RecursorFuzzTest/3.Alignment (621 ms) [ RUN ] RecursorFuzzTest/3.LinkAlphaBeta [ OK ] RecursorFuzzTest/3.LinkAlphaBeta (650 ms) [ RUN ] RecursorFuzzTest/3.ExtendAlpha [ OK ] RecursorFuzzTest/3.ExtendAlpha (171 ms) [ RUN ] RecursorFuzzTest/3.ExtendBeta [ OK ] RecursorFuzzTest/3.ExtendBeta (180 ms) [----------] 5 tests from RecursorFuzzTest/3 (2245 ms total) [----------] 7 tests from MutationTest [ RUN ] MutationTest.BasicTest [ OK ] MutationTest.BasicTest (0 ms) [ RUN ] MutationTest.DeleteTest [ OK ] MutationTest.DeleteTest (0 ms) [ RUN ] MutationTest.InsertTest [ OK ] MutationTest.InsertTest (0 ms) [ RUN ] MutationTest.ApplyMutationsTest [ OK ] MutationTest.ApplyMutationsTest (0 ms) [ RUN ] MutationTest.ApplyMutationsToSamePositionTest [ OK ] MutationTest.ApplyMutationsToSamePositionTest (0 ms) [ RUN ] MutationTest.MutationsToTranscript [ OK ] MutationTest.MutationsToTranscript (0 ms) [ RUN ] MutationTest.MutatedTemplatePositionsTest [ OK ] MutationTest.MutatedTemplatePositionsTest (0 ms) [----------] 7 tests from MutationTest (3 ms total) [----------] 3 tests from PairwiseAlignmentTests [ RUN ] PairwiseAlignmentTests.RepresentationTests [ OK ] PairwiseAlignmentTests.RepresentationTests (0 ms) [ RUN ] PairwiseAlignmentTests.GlobalAlignmentTests [ OK ] PairwiseAlignmentTests.GlobalAlignmentTests (0 ms) [ RUN ] PairwiseAlignmentTests.TargetPositionsInQueryTest [ OK ] PairwiseAlignmentTests.TargetPositionsInQueryTest (1 ms) [----------] 3 tests from PairwiseAlignmentTests (1 ms total) [----------] 2 tests from AffineAlignmentTests [ RUN ] AffineAlignmentTests.BasicTests [ OK ] AffineAlignmentTests.BasicTests (0 ms) [ RUN ] AffineAlignmentTests.LargeGapTest [ OK ] AffineAlignmentTests.LargeGapTest (128 ms) [----------] 2 tests from AffineAlignmentTests (129 ms total) [----------] 1 test from IupacAlignmentTests [ RUN ] IupacAlignmentTests.BasicTest [ OK ] IupacAlignmentTests.BasicTest (0 ms) [----------] 1 test from IupacAlignmentTests (0 ms total) [----------] 1 test from LinearAlignmentTests [ RUN ] LinearAlignmentTests.BasicTest [ OK ] LinearAlignmentTests.BasicTest (2 ms) [----------] 1 test from LinearAlignmentTests (2 ms total) [----------] 8 tests from MutationScorerTest/0, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] MutationScorerTest/0.BasicTest [ OK ] MutationScorerTest/0.BasicTest (0 ms) [ RUN ] MutationScorerTest/0.CopyTest [ OK ] MutationScorerTest/0.CopyTest (0 ms) [ RUN ] MutationScorerTest/0.MutationsAtBeginning [ OK ] MutationScorerTest/0.MutationsAtBeginning (0 ms) [ RUN ] MutationScorerTest/0.MutationsAtEnd [ OK ] MutationScorerTest/0.MutationsAtEnd (0 ms) [ RUN ] MutationScorerTest/0.TinyTemplate [ OK ] MutationScorerTest/0.TinyTemplate (1 ms) [ RUN ] MutationScorerTest/0.TemplateMutationWorkflow [ OK ] MutationScorerTest/0.TemplateMutationWorkflow (0 ms) [ RUN ] MutationScorerTest/0.DinucleotideInsertionTest [ OK ] MutationScorerTest/0.DinucleotideInsertionTest (13 ms) [ RUN ] MutationScorerTest/0.DinucleotideDeletionTest [ OK ] MutationScorerTest/0.DinucleotideDeletionTest (7 ms) [----------] 8 tests from MutationScorerTest/0 (21 ms total) [----------] 8 tests from MutationScorerTest/1, where TypeParam = ConsensusCore::SseRecursor [ RUN ] MutationScorerTest/1.BasicTest [ OK ] MutationScorerTest/1.BasicTest (1 ms) [ RUN ] MutationScorerTest/1.CopyTest [ OK ] MutationScorerTest/1.CopyTest (1 ms) [ RUN ] MutationScorerTest/1.MutationsAtBeginning [ OK ] MutationScorerTest/1.MutationsAtBeginning (0 ms) [ RUN ] MutationScorerTest/1.MutationsAtEnd [ OK ] MutationScorerTest/1.MutationsAtEnd (0 ms) [ RUN ] MutationScorerTest/1.TinyTemplate [ OK ] MutationScorerTest/1.TinyTemplate (1 ms) [ RUN ] MutationScorerTest/1.TemplateMutationWorkflow [ OK ] MutationScorerTest/1.TemplateMutationWorkflow (1 ms) [ RUN ] MutationScorerTest/1.DinucleotideInsertionTest [ OK ] MutationScorerTest/1.DinucleotideInsertionTest (14 ms) [ RUN ] MutationScorerTest/1.DinucleotideDeletionTest [ OK ] MutationScorerTest/1.DinucleotideDeletionTest (7 ms) [----------] 8 tests from MutationScorerTest/1 (26 ms total) [----------] 8 tests from MutationScorerTest/2, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] MutationScorerTest/2.BasicTest [ OK ] MutationScorerTest/2.BasicTest (0 ms) [ RUN ] MutationScorerTest/2.CopyTest [ OK ] MutationScorerTest/2.CopyTest (1 ms) [ RUN ] MutationScorerTest/2.MutationsAtBeginning [ OK ] MutationScorerTest/2.MutationsAtBeginning (1 ms) [ RUN ] MutationScorerTest/2.MutationsAtEnd [ OK ] MutationScorerTest/2.MutationsAtEnd (1 ms) [ RUN ] MutationScorerTest/2.TinyTemplate [ OK ] MutationScorerTest/2.TinyTemplate (0 ms) [ RUN ] MutationScorerTest/2.TemplateMutationWorkflow [ OK ] MutationScorerTest/2.TemplateMutationWorkflow (2 ms) [ RUN ] MutationScorerTest/2.DinucleotideInsertionTest [ OK ] MutationScorerTest/2.DinucleotideInsertionTest (13 ms) [ RUN ] MutationScorerTest/2.DinucleotideDeletionTest [ OK ] MutationScorerTest/2.DinucleotideDeletionTest (6 ms) [----------] 8 tests from MutationScorerTest/2 (26 ms total) [----------] 8 tests from MutationScorerTest/3, where TypeParam = ConsensusCore::SseRecursor [ RUN ] MutationScorerTest/3.BasicTest [ OK ] MutationScorerTest/3.BasicTest (1 ms) [ RUN ] MutationScorerTest/3.CopyTest [ OK ] MutationScorerTest/3.CopyTest (1 ms) [ RUN ] MutationScorerTest/3.MutationsAtBeginning [ OK ] MutationScorerTest/3.MutationsAtBeginning (0 ms) [ RUN ] MutationScorerTest/3.MutationsAtEnd [ OK ] MutationScorerTest/3.MutationsAtEnd (1 ms) [ RUN ] MutationScorerTest/3.TinyTemplate [ OK ] MutationScorerTest/3.TinyTemplate (0 ms) [ RUN ] MutationScorerTest/3.TemplateMutationWorkflow [ OK ] MutationScorerTest/3.TemplateMutationWorkflow (2 ms) [ RUN ] MutationScorerTest/3.DinucleotideInsertionTest [ OK ] MutationScorerTest/3.DinucleotideInsertionTest (13 ms) [ RUN ] MutationScorerTest/3.DinucleotideDeletionTest [ OK ] MutationScorerTest/3.DinucleotideDeletionTest (7 ms) [----------] 8 tests from MutationScorerTest/3 (26 ms total) [----------] 2 tests from SparseVectorTest [ RUN ] SparseVectorTest.BasicTest [ OK ] SparseVectorTest.BasicTest (0 ms) [ RUN ] SparseVectorTest.BasicTest2 [ OK ] SparseVectorTest.BasicTest2 (0 ms) [----------] 2 tests from SparseVectorTest (0 ms total) [----------] 1 test from SparseVector [ RUN ] SparseVector.CopyTest [ OK ] SparseVector.CopyTest (0 ms) [----------] 1 test from SparseVector (1 ms total) [----------] 11 tests from MatrixTest/0, where TypeParam = ConsensusCore::DenseMatrix [ RUN ] MatrixTest/0.Basic [ OK ] MatrixTest/0.Basic (0 ms) [ RUN ] MatrixTest/0.Nullability [ OK ] MatrixTest/0.Nullability (0 ms) [ RUN ] MatrixTest/0.Ranges [ OK ] MatrixTest/0.Ranges (0 ms) [ RUN ] MatrixTest/0.IsColumnEmpty [ OK ] MatrixTest/0.IsColumnEmpty (0 ms) [ RUN ] MatrixTest/0.SSE [ OK ] MatrixTest/0.SSE (0 ms) [ RUN ] MatrixTest/0.ToHostArray [ OK ] MatrixTest/0.ToHostArray (0 ms) [ RUN ] MatrixTest/0.NonSequentialAccess [ OK ] MatrixTest/0.NonSequentialAccess (0 ms) [ RUN ] MatrixTest/0.Holes [ OK ] MatrixTest/0.Holes (0 ms) [ RUN ] MatrixTest/0.BigBandedMatrix N13ConsensusCore11DenseMatrixE : 1000000 [ OK ] MatrixTest/0.BigBandedMatrix (34 ms) [ RUN ] MatrixTest/0.BigIrregularBandedMatrix [ OK ] MatrixTest/0.BigIrregularBandedMatrix (0 ms) [ RUN ] MatrixTest/0.CopyTest [ OK ] MatrixTest/0.CopyTest (0 ms) [----------] 11 tests from MatrixTest/0 (35 ms total) [----------] 11 tests from MatrixTest/1, where TypeParam = ConsensusCore::SparseMatrix [ RUN ] MatrixTest/1.Basic [ OK ] MatrixTest/1.Basic (1 ms) [ RUN ] MatrixTest/1.Nullability [ OK ] MatrixTest/1.Nullability (0 ms) [ RUN ] MatrixTest/1.Ranges [ OK ] MatrixTest/1.Ranges (0 ms) [ RUN ] MatrixTest/1.IsColumnEmpty [ OK ] MatrixTest/1.IsColumnEmpty (0 ms) [ RUN ] MatrixTest/1.SSE [ OK ] MatrixTest/1.SSE (0 ms) [ RUN ] MatrixTest/1.ToHostArray [ OK ] MatrixTest/1.ToHostArray (0 ms) [ RUN ] MatrixTest/1.NonSequentialAccess [ OK ] MatrixTest/1.NonSequentialAccess (0 ms) [ RUN ] MatrixTest/1.Holes [ OK ] MatrixTest/1.Holes (0 ms) [ RUN ] MatrixTest/1.BigBandedMatrix N13ConsensusCore12SparseMatrixE : 1001976 [ OK ] MatrixTest/1.BigBandedMatrix (39 ms) [ RUN ] MatrixTest/1.BigIrregularBandedMatrix [ OK ] MatrixTest/1.BigIrregularBandedMatrix (0 ms) [ RUN ] MatrixTest/1.CopyTest [ OK ] MatrixTest/1.CopyTest (0 ms) [----------] 11 tests from MatrixTest/1 (41 ms total) [----------] Global test environment tear-down [==========] 158 tests from 29 test cases ran. (15281 ms total) [ PASSED ] 158 tests. make[3]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' /usr/bin/make test-python make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[3]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python SWIG_LIB=/usr/share/swig/4.5.0 /usr/bin/swig -Wall -c++ -python -builtin -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -module ConsensusCore -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx src/SWIG/ConsensusCore.i /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Feature.hpp:20: Warning 309: private inheritance from base 'boost::shared_array< T >' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:28: Warning 309: private inheritance from base 'boost_dense_matrix' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Poa/PoaConsensus.hpp:24: Warning 309: private inheritance from base 'noncopyable' (ignored). g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -pthread -shared -Wl,-O1 -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I /usr/include/python3.14 -I /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/_ConsensusCore.so 1.0.2 Python3 build is OK! make[3]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=pybuild dh_prep -a -O--buildsystem=pybuild dh_auto_install -a -O--buildsystem=pybuild I: pybuild base:385: /usr/bin/python3 setup.py install --root /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore WARNING: '' not a valid package name; please use only .-separated package names in setup.py running build ConsensusCore configuration summary ----------------------------------- BOOST = /usr/include/ SWIG = /usr/bin/swig SWIG_LIB = /usr/share/swig/4.5.0 PYTHON_INCLUDE = /usr/include/python3.14 NUMPY_INCLUDE = /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include DEBUG = CPP_STD = c++14 make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Cpp.mk -j8 make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[2]: '/build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a' is up to date. make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Python.mk make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python SWIG_LIB=/usr/share/swig/4.5.0 /usr/bin/swig -Wall -c++ -python -builtin -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -module ConsensusCore -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx src/SWIG/ConsensusCore.i /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Feature.hpp:20: Warning 309: private inheritance from base 'boost::shared_array< T >' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:28: Warning 309: private inheritance from base 'boost_dense_matrix' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Poa/PoaConsensus.hpp:24: Warning 309: private inheritance from base 'noncopyable' (ignored). g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -pthread -shared -Wl,-O1 -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I /usr/include/python3.14 -I /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/_ConsensusCore.so make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running install_lib running build_py copying build/Python/ConsensusCore.py -> /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build copying build/Python/ConsensusCore.py -> /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build copying build/Python/_ConsensusCore.so -> /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build creating /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages copying /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build/_ConsensusCore.so -> /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages copying /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build/ConsensusCore.py -> /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages byte-compiling /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages/ConsensusCore.py to ConsensusCore.cpython-314.pyc running install_egg_info running egg_info creating build/Python/ConsensusCore.egg-info writing build/Python/ConsensusCore.egg-info/PKG-INFO writing dependency_links to build/Python/ConsensusCore.egg-info/dependency_links.txt writing top-level names to build/Python/ConsensusCore.egg-info/top_level.txt writing manifest file 'build/Python/ConsensusCore.egg-info/SOURCES.txt' reading manifest file 'build/Python/ConsensusCore.egg-info/SOURCES.txt' adding license file 'LICENSES' writing manifest file 'build/Python/ConsensusCore.egg-info/SOURCES.txt' Copying build/Python/ConsensusCore.egg-info to /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages/ConsensusCore-1.0.2.egg-info Skipping SOURCES.txt running install_scripts dh_install -a -O--buildsystem=pybuild debian/rules execute_after_dh_install make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' find debian -name meson.build -delete make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_installdocs -a -O--buildsystem=pybuild dh_installchangelogs -a -O--buildsystem=pybuild dh_python3 -a -O--buildsystem=pybuild I: dh_python3 fs:507: renaming _ConsensusCore.so to _ConsensusCore.cpython-314-riscv64-linux-gnu.so debian/rules execute_after_dh_python3 make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_numpy3 Possible precedence problem between ! and pattern match (m//) at /usr/bin/dh_numpy3 line 68. dh_numpy3: skipping binary package libconsensuscore-dev which does not depend on the NumPy C ABI make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_installsystemduser -a -O--buildsystem=pybuild dh_perl -a -O--buildsystem=pybuild dh_link -a -O--buildsystem=pybuild dh_strip_nondeterminism -a -O--buildsystem=pybuild dh_compress -a -O--buildsystem=pybuild dh_fixperms -a -O--buildsystem=pybuild dh_missing -a -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-riscv64-lp64d.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-riscv64-lp64d.so.1.usr-is-merged dh_installdeb -a -O--buildsystem=pybuild dh_gencontrol -a -O--buildsystem=pybuild dpkg-gencontrol: warning: Depends field of package libconsensuscore-dev: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -a -O--buildsystem=pybuild dh_builddeb -a -O--buildsystem=pybuild dpkg-deb: building package 'libconsensuscore-dev' in '../libconsensuscore-dev_1.1.1+dfsg-9+b2_riscv64.deb'. dpkg-deb: building package 'python3-pbconsensuscore' in '../python3-pbconsensuscore_1.1.1+dfsg-9+b2_riscv64.deb'. dpkg-deb: building package 'python3-pbconsensuscore-dbgsym' in '../python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9+b2_riscv64.deb'. dpkg-genbuildinfo --build=any -O../consensuscore_1.1.1+dfsg-9+b2_riscv64.buildinfo dpkg-genchanges --build=any -O../consensuscore_1.1.1+dfsg-9+b2_riscv64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2026-09-21T04:04:35Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Mon, 21 Sep 2026 04:04:40 +0000 | +------------------------------------------------------------------------------+ consensuscore_1.1.1+dfsg-9+b2_riscv64.changes: ---------------------------------------------- Format: 1.8 Date: Fri, 09 Jan 2026 07:03:52 +0000 Source: consensuscore (1.1.1+dfsg-9) Binary: libconsensuscore-dev python3-pbconsensuscore python3-pbconsensuscore-dbgsym Binary-Only: yes Architecture: riscv64 Version: 1.1.1+dfsg-9+b2 Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team Changed-By: riscv64 Build Daemon (rv-manda-01) Description: libconsensuscore-dev - algorithms for PacBio multiple sequence consensus -- development python3-pbconsensuscore - algorithms for PacBio multiple sequence consensus -- Python 3 Changes: consensuscore (1.1.1+dfsg-9+b2) sid; urgency=low, binary-only=yes . * Binary-only non-maintainer upload for riscv64; no source changes. * Rebuild without Python 3.13 Checksums-Sha1: 93f1468a5ede5d1a70b11e7d7ce74c466b28e7cb 6966 consensuscore_1.1.1+dfsg-9+b2_riscv64.buildinfo 06e9dfaf233a0ba348c9fe5b8b2bdc94d21d0c68 3012492 libconsensuscore-dev_1.1.1+dfsg-9+b2_riscv64.deb 45f5be30949ee48ae4b457c6490aaf8056d6e24f 9780416 python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9+b2_riscv64.deb b9e35b23d1b36c3ccde64b387ea3c3eb098e4e70 815428 python3-pbconsensuscore_1.1.1+dfsg-9+b2_riscv64.deb Checksums-Sha256: 7cf86462b11ec5965b714fc3fd14e458abb1532ac2cb49237424e35af505f2de 6966 consensuscore_1.1.1+dfsg-9+b2_riscv64.buildinfo 0ff7d8e56e506a4a5c93319a2a02fb0987e79d011e5b1571d1c8dae785a86482 3012492 libconsensuscore-dev_1.1.1+dfsg-9+b2_riscv64.deb 8c9a724a952057e07682d03406d5e46b2dd9cd3fba795241e7899bea6e109f4f 9780416 python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9+b2_riscv64.deb ac06044f1269eb7e75ffa149a7d4d4124d8853881c6f009aaaba9bbb62342798 815428 python3-pbconsensuscore_1.1.1+dfsg-9+b2_riscv64.deb Files: 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man-db (= 2.13.1-1), mawk (= 1.3.4.20260302-1), media-types (= 14.0.0), ncurses-base (= 6.6+20260608-2), ncurses-bin (= 6.6+20260608-2), netbase (= 6.6), openssl-provider-legacy (= 3.6.4-1), patch (= 2.8-2), perl (= 5.42.3-1), perl-base (= 5.42.3-1), perl-modules-5.42 (= 5.42.3-1), po-debconf (= 1.0.22), python3 (= 3.14.7-3), python3-all (= 3.14.7-3), python3-all-dev (= 3.14.7-3), python3-autocommand (= 2.2.2-4), python3-dev (= 3.14.7-3), python3-inflect (= 7.5.0-2), python3-jaraco.context (= 6.0.1-2), python3-jaraco.functools (= 4.1.0-1), python3-jaraco.text (= 4.0.0-1), python3-minimal (= 3.14.7-3), python3-more-itertools (= 11.1.0-2), python3-numpy (= 1:2.4.6+ds-4+b1), python3-numpy-dev (= 1:2.4.6+ds-4+b1), python3-pkg-resources (= 80.9.0-2), python3-setuptools (= 80.9.0-2), python3-typeguard (= 4.4.4-3), python3-typing-extensions (= 4.16.0-5), python3-zipp (= 3.23.0-1), python3.14 (= 3.14.7-3), python3.14-dev (= 3.14.7-3), python3.14-minimal (= 3.14.7-3), readline-common (= 8.3-4), 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36546 Section: libdevel Priority: optional Multi-Arch: same Homepage: https://github.com/PacificBiosciences/ConsensusCore Description: algorithms for PacBio multiple sequence consensus -- development files ConsensusCore is a library of C++ algorithms for Pacific Biosciences multiple sequence consensus that powers Quiver (Python) and ConsensusTools (.NET). This library primarily exists as the backend for GenomicConsensus, which implements Quiver. . This package is part of the SMRT Analysis suite. It provides the header files and static library. drwxr-xr-x root/root 0 2026-01-09 07:03 ./ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/include/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/include/ConsensusCore/ drwxr-xr-x root/root 0 2018-08-14 14:23 ./usr/include/ConsensusCore/Align/ -rw-r--r-- root/root 1214 2018-08-14 14:23 ./usr/include/ConsensusCore/Align/AffineAlignment.hpp -rw-r--r-- root/root 775 2018-08-14 14:23 ./usr/include/ConsensusCore/Align/AlignConfig.hpp -rw-r--r-- root/root 565 2018-08-14 14:23 ./usr/include/ConsensusCore/Align/LinearAlignment.hpp -rw-r--r-- root/root 1956 2018-08-14 14:23 ./usr/include/ConsensusCore/Align/PairwiseAlignment.hpp -rw-r--r-- root/root 196 2018-08-14 14:23 ./usr/include/ConsensusCore/Checksum.hpp -rw-r--r-- root/root 653 2018-08-14 14:23 ./usr/include/ConsensusCore/Coverage.hpp drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/include/ConsensusCore/Edna/ -rw-r--r-- root/root 792 2018-08-14 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./usr/include/ConsensusCore/Poa/RangeFinder.hpp drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/include/ConsensusCore/Quiver/ -rw-r--r-- root/root 531 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/Diploid.hpp -rw-r--r-- root/root 7338 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/MultiReadMutationScorer.hpp -rw-r--r-- root/root 1178 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/MutationEnumerator-inl.hpp -rw-r--r-- root/root 1776 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/MutationEnumerator.hpp -rw-r--r-- root/root 1924 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/MutationScorer.hpp -rw-r--r-- root/root 5260 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/QuiverConfig.hpp -rw-r--r-- root/root 933 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/QuiverConsensus.hpp -rw-r--r-- root/root 6723 2026-01-09 07:03 ./usr/include/ConsensusCore/Quiver/QvEvaluator.hpp -rw-r--r-- root/root 773 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/ReadScorer.hpp 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./usr/include/ConsensusCore/Statistics/ -rw-r--r-- root/root 378 2018-08-14 14:23 ./usr/include/ConsensusCore/Statistics/Binomial.hpp -rw-r--r-- root/root 2483 2018-08-14 14:23 ./usr/include/ConsensusCore/Types.hpp -rw-r--r-- root/root 1093 2018-08-14 14:23 ./usr/include/ConsensusCore/Utils.hpp -rw-r--r-- root/root 433 2018-08-14 14:23 ./usr/include/ConsensusCore/Version.hpp drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/lib/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/lib/riscv64-linux-gnu/ -rw-r--r-- root/root 37251306 2026-01-09 07:03 ./usr/lib/riscv64-linux-gnu/libConsensusCore.a drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/share/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/share/doc/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/share/doc/libconsensuscore-dev/ -rw-r--r-- root/root 821 2026-01-09 07:03 ./usr/share/doc/libconsensuscore-dev/changelog.Debian.gz -rw-r--r-- root/root 229 2026-01-09 07:03 ./usr/share/doc/libconsensuscore-dev/changelog.Debian.riscv64.gz -rw-r--r-- root/root 420 2018-08-14 14:23 ./usr/share/doc/libconsensuscore-dev/changelog.gz -rw-r--r-- root/root 5866 2026-01-09 07:01 ./usr/share/doc/libconsensuscore-dev/copyright python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9+b2_riscv64.deb ---------------------------------------------------------- new Debian package, version 2.0. size 9780416 bytes: control archive=564 bytes. 458 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: python3-pbconsensuscore-dbgsym Source: consensuscore (1.1.1+dfsg-9) Version: 1.1.1+dfsg-9+b2 Auto-Built-Package: debug-symbols Architecture: riscv64 Maintainer: Debian Med Packaging Team Installed-Size: 9940 Depends: python3-pbconsensuscore (= 1.1.1+dfsg-9+b2) Section: debug Priority: optional Description: debug symbols for python3-pbconsensuscore Build-Ids: 9fb03ca893b21d7827bffa251991592c3e8b4e7a drwxr-xr-x root/root 0 2026-01-09 07:03 ./ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/lib/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/lib/debug/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/lib/debug/.build-id/9f/ -rw-r--r-- root/root 10168128 2026-01-09 07:03 ./usr/lib/debug/.build-id/9f/b03ca893b21d7827bffa251991592c3e8b4e7a.debug drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/share/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/share/doc/ lrwxrwxrwx root/root 0 2026-01-09 07:03 ./usr/share/doc/python3-pbconsensuscore-dbgsym -> python3-pbconsensuscore python3-pbconsensuscore_1.1.1+dfsg-9+b2_riscv64.deb --------------------------------------------------- new Debian package, version 2.0. size 815428 bytes: control archive=1412 bytes. 892 bytes, 18 lines control 875 bytes, 9 lines md5sums 305 bytes, 12 lines * postinst #!/bin/sh 443 bytes, 12 lines * prerm #!/bin/sh Package: python3-pbconsensuscore Source: consensuscore (1.1.1+dfsg-9) Version: 1.1.1+dfsg-9+b2 Architecture: riscv64 Maintainer: Debian Med Packaging Team Installed-Size: 2830 Depends: python3 (<< 3.15), python3 (>= 3.14~), python3-numpy2-abi0 | python3-numpy-abi9, python3:any, libc6 (>= 2.27), libgcc-s1 (>= 4.5), libstdc++6 (>= 13.1) Section: python Priority: optional Homepage: https://github.com/PacificBiosciences/ConsensusCore Description: algorithms for PacBio multiple sequence consensus -- Python 3 ConsensusCore is a library of C++ algorithms for Pacific Biosciences multiple sequence consensus that powers Quiver (Python) and ConsensusTools (.NET). This library primarily exists as the backend for GenomicConsensus, which implements Quiver. . This package is part of the SMRT Analysis suite. 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